RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 GAGE6Q13070 117 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 ZFP2Q6ZN57 461 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 IGHV4-30-2A0A087WSY4 118 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 TRBV7-1A0A0A6YYK4 115 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 ZNF876PQ49A33 203 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 MAPKAPK5-AS1Q8N8E1 139 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 GAS8-AS1O95177 125 aa11.79□□□□□ -0.52
VARS2-201ENST00000321897 M0R2P5 195 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 PPP1R17O96001 155 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 IGHV4-59P01825 116 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 MSMBP08118 114 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 PHLDA1Q8WV24 401 aaPredicted RBP11.78□□□□□ -0.52
VARS2-201ENST00000321897 IGHV3-16A0A0C4DH30 117 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 CIRBPQ14011 172 aaKnown RBP11.78□□□□□ -0.52
VARS2-201ENST00000321897 RNASE13Q5GAN3 156 aaKnown RBP11.78□□□□□ -0.52
VARS2-201ENST00000321897 OR13C6PQ8NH95 151 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 PCSK5Q92824 1860 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 CENPVL3A0A0U1RRI6 287 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 B4DSR2 109 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 GAGE7O76087 117 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 GAGE4Q13068 117 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 C15orf53Q8NAA6 179 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 PRO1854Q9UHT4 67 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 TNFRSF18Q9Y5U5 241 aa11.78□□□□□ -0.52
VARS2-201ENST00000321897 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.52
VARS2-201ENST00000321897 LINC01559Q495D7 138 aa11.77□□□□□ -0.53
VARS2-201ENST00000321897 UNQ9165/PRO28630Q6UXU0 137 aa11.77□□□□□ -0.53
VARS2-201ENST00000321897 DNAL4O96015 105 aa11.77□□□□□ -0.53
VARS2-201ENST00000321897 CITED1Q99966 193 aa11.77□□□□□ -0.53
VARS2-201ENST00000321897 IGF1P05019 195 aa11.76□□□□□ -0.53
VARS2-201ENST00000321897 DEFB131AP59861 70 aa11.76□□□□□ -0.53
VARS2-201ENST00000321897 CRYGCP07315 174 aa11.76□□□□□ -0.53
VARS2-201ENST00000321897 IFITM1P13164 125 aa11.76□□□□□ -0.53
VARS2-201ENST00000321897 DAZ1Q9NQZ3 744 aaKnown RBP11.76□□□□□ -0.53
VARS2-201ENST00000321897 CRIP1P50238 77 aa11.76□□□□□ -0.53
VARS2-201ENST00000321897 ATXN8Q156A1 80 aa11.76□□□□□ -0.53
VARS2-201ENST00000321897 ANKRD29Q8N6D5 301 aa11.76□□□□□ -0.53
VARS2-201ENST00000321897 HECTD1Q9ULT8 2610 aa11.75□□□□□ -0.53
VARS2-201ENST00000321897 BUB3O43684 328 aa11.75□□□□□ -0.53
VARS2-201ENST00000321897 OVOL1O14753 267 aa11.74□□□□□ -0.53
VARS2-201ENST00000321897 IGF2-ASQ6U949 168 aa11.74□□□□□ -0.53
VARS2-201ENST00000321897 DUSP14O95147 198 aaKnown RBP11.74□□□□□ -0.53
VARS2-201ENST00000321897 H3BMM0 161 aa11.74□□□□□ -0.53
VARS2-201ENST00000321897 TAL2Q16559 108 aa11.74□□□□□ -0.53
VARS2-201ENST00000321897 UFSP1Q6NVU6 142 aa11.74□□□□□ -0.53
VARS2-201ENST00000321897 Q6ZQT7 251 aa11.74□□□□□ -0.53
VARS2-201ENST00000321897 TEN1Q86WV5 123 aa11.74□□□□□ -0.53
VARS2-201ENST00000321897 UBE2WQ96B02 151 aa11.74□□□□□ -0.53
VARS2-201ENST00000321897 C19orf54Q5BKX5 351 aa11.73□□□□□ -0.53
VARS2-201ENST00000321897 TRPT1Q86TN4 253 aaKnown RBP11.73□□□□□ -0.53
VARS2-201ENST00000321897 EDA2RQ9HAV5 297 aa11.73□□□□□ -0.53
VARS2-201ENST00000321897 IGHV3-38A0A0C4DH36 116 aa11.73□□□□□ -0.53
VARS2-201ENST00000321897 C8orf31Q8N9H6 132 aa11.73□□□□□ -0.53
VARS2-201ENST00000321897 SDHAF1A6NFY7 115 aa11.73□□□□□ -0.53
VARS2-201ENST00000321897 LINC00574Q9H8X3 128 aa11.73□□□□□ -0.53
VARS2-201ENST00000321897 E9PLD3 99 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 Q6ZUT4 128 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 HIGD1BQ9P298 99 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 XCL2Q9UBD3 114 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 J3QQQ9 107 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 DEFB112Q30KQ8 113 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 C9orf153Q5TBE3 101 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 COL4A2P08572 1712 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 VCYO14598 125 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 RPL39P62891 51 aaKnown RBP11.72□□□□□ -0.53
VARS2-201ENST00000321897 JPT2Q9H910 190 aa11.72□□□□□ -0.53
VARS2-201ENST00000321897 A4D1N5 150 aa11.71□□□□□ -0.53
VARS2-201ENST00000321897 YAE1D1Q9NRH1 226 aa11.71□□□□□ -0.53
VARS2-201ENST00000321897 LRBAP50851 2863 aa11.71□□□□□ -0.53
VARS2-201ENST00000321897 PMVKQ15126 192 aa11.71□□□□□ -0.54
VARS2-201ENST00000321897 LAMA5O15230 3695 aa11.71□□□□□ -0.54
VARS2-201ENST00000321897 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.54
VARS2-201ENST00000321897 CFHR3Q02985 330 aa11.71□□□□□ -0.54
VARS2-201ENST00000321897 LGALS1P09382 135 aaKnown RBP11.7□□□□□ -0.54
VARS2-201ENST00000321897 NSUN5P1Q3KNT7 163 aa11.7□□□□□ -0.54
VARS2-201ENST00000321897 HERV-K104P63124 156 aa11.7□□□□□ -0.54
VARS2-201ENST00000321897 AJUBAQ96IF1 538 aa11.7□□□□□ -0.54
VARS2-201ENST00000321897 TRGV2A0A075B6R0 118 aa11.7□□□□□ -0.54
VARS2-201ENST00000321897 TRBV7-9A0A0J9YWB2 115 aa11.7□□□□□ -0.54
VARS2-201ENST00000321897 A0A1W2PPR1 153 aa11.7□□□□□ -0.54
VARS2-201ENST00000321897 C10orf99Q6UWK7 81 aa11.7□□□□□ -0.54
VARS2-201ENST00000321897 PLEKHB2Q96CS7 222 aa11.7□□□□□ -0.54
VARS2-201ENST00000321897 RPL35AP18077 110 aaKnown RBP11.69□□□□□ -0.54
VARS2-201ENST00000321897 NPBQ8NG41 125 aa11.69□□□□□ -0.54
VARS2-201ENST00000321897 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
VARS2-201ENST00000321897 HTN3P15516 51 aa11.68□□□□□ -0.54
VARS2-201ENST00000321897 MYCNOSP40205 109 aa11.68□□□□□ -0.54
VARS2-201ENST00000321897 TCL1BO95988 128 aa11.68□□□□□ -0.54
VARS2-201ENST00000321897 CFC1BP0CG36 223 aa11.68□□□□□ -0.54
VARS2-201ENST00000321897 CFC1P0CG37 223 aa11.68□□□□□ -0.54
VARS2-201ENST00000321897 USP24Q9UPU5 2620 aa11.68□□□□□ -0.54
VARS2-201ENST00000321897 PTPRBP23467 1997 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 TCTEX1D4Q5JR98 221 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms