RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 AMELXQ99217 191 aa14.26□□□□□ -0.13
RTN4-201ENST00000317610 ABCA2Q9BZC7 2435 aa14.26□□□□□ -0.13
RTN4-201ENST00000317610 LOC107984156A0A0G2JMH3 177 aa14.26□□□□□ -0.13
RTN4-201ENST00000317610 A6NDX4 124 aa14.26□□□□□ -0.13
RTN4-201ENST00000317610 SDHAF1A6NFY7 115 aa14.26□□□□□ -0.13
RTN4-201ENST00000317610 Q6ZS46 218 aa14.26□□□□□ -0.13
RTN4-201ENST00000317610 ARL17AQ8IVW1 177 aa14.26□□□□□ -0.13
RTN4-201ENST00000317610 ZNRF2Q8NHG8 242 aa14.26□□□□□ -0.13
RTN4-201ENST00000317610 ASH1LQ9NR48 2969 aaKnown RBP14.25□□□□□ -0.13
RTN4-201ENST00000317610 IGLV1-40P01703 118 aa14.25□□□□□ -0.13
RTN4-201ENST00000317610 PF4V1P10720 104 aa14.25□□□□□ -0.13
RTN4-201ENST00000317610 NFE4Q86UQ8 179 aa14.25□□□□□ -0.13
RTN4-201ENST00000317610 A0A087WWL8 130 aa14.25□□□□□ -0.13
RTN4-201ENST00000317610 K7EMT4 169 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 CFC1BP0CG36 223 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 CFC1P0CG37 223 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 ID1P41134 155 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 CLEC2AQ6UVW9 174 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 SBSPONQ8IVN8 264 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 DCANP1Q8TF63 244 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 C9orf85Q96MD7 179 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 TRBV20-1A0A075B6N2 111 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 A0A1B0GV72 72 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 IGHV4-39P01824 125 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 LY6EQ16553 131 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 TCTEX1D4Q5JR98 221 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 CDIP1Q9H305 208 aa14.24□□□□□ -0.13
RTN4-201ENST00000317610 SPTBN1Q01082 2364 aaKnown RBP14.23□□□□□ -0.13
RTN4-201ENST00000317610 F5H697 171 aa14.23□□□□□ -0.13
RTN4-201ENST00000317610 TMEM170BQ5T4T1 132 aa14.23□□□□□ -0.13
RTN4-201ENST00000317610 C10orf126Q8N4M7 172 aa14.23□□□□□ -0.13
RTN4-201ENST00000317610 ODF3Q96PU9 254 aa14.23□□□□□ -0.13
RTN4-201ENST00000317610 SRD5A1P18405 259 aa14.22□□□□□ -0.13
RTN4-201ENST00000317610 NSUN5P1Q3KNT7 163 aa14.22□□□□□ -0.13
RTN4-201ENST00000317610 SYT8Q8NBV8 401 aa14.22□□□□□ -0.13
RTN4-201ENST00000317610 IGHV3-16A0A0C4DH30 117 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 H3BUX3 64 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 J3QQQ9 107 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 TCL1BO95988 128 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 IGHV4-38-2P0DP08 117 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 CFHR3Q02985 330 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 RHOHQ15669 191 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 SFTA2Q6UW10 78 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 TRAV12-3A0A0B4J271 114 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 EDN2P20800 178 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 TEN1Q86WV5 123 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 DEFB104AQ8WTQ1 72 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 PPDPFLQ8WWR9 84 aa14.21□□□□□ -0.13
RTN4-201ENST00000317610 BLCAPP62952 87 aa14.2□□□□□ -0.14
RTN4-201ENST00000317610 M0QY20 66 aa14.2□□□□□ -0.14
RTN4-201ENST00000317610 ZNF418Q8TF45 676 aaPredicted RBP14.2□□□□□ -0.14
RTN4-201ENST00000317610 CARD19Q96LW7 228 aa14.2□□□□□ -0.14
RTN4-201ENST00000317610 PRO1854Q9UHT4 67 aa14.19□□□□□ -0.14
RTN4-201ENST00000317610 ZFHX3Q15911 3703 aa14.19□□□□□ -0.14
RTN4-201ENST00000317610 IGHV4-61A0A0C4DH41 118 aa14.19□□□□□ -0.14
RTN4-201ENST00000317610 LGALS3P17931 250 aaKnown RBP14.19□□□□□ -0.14
RTN4-201ENST00000317610 HIVEP3Q5T1R4 2406 aa14.19□□□□□ -0.14
RTN4-201ENST00000317610 ATRXP46100 2492 aa14.18□□□□□ -0.14
RTN4-201ENST00000317610 TMEM223A0PJW6 202 aa14.18□□□□□ -0.14
RTN4-201ENST00000317610 LEPROTO15243 131 aa14.18□□□□□ -0.14
RTN4-201ENST00000317610 FHL3Q13643 280 aa14.18□□□□□ -0.14
RTN4-201ENST00000317610 PTH2Q96A98 100 aa14.18□□□□□ -0.14
RTN4-201ENST00000317610 VCX2Q9H322 139 aa14.18□□□□□ -0.14
RTN4-201ENST00000317610 C19orf84I3L1E1 186 aa14.17□□□□□ -0.14
RTN4-201ENST00000317610 WFDC12Q8WWY7 111 aa14.17□□□□□ -0.14
RTN4-201ENST00000317610 MDFICQ9P1T7 246 aa14.17□□□□□ -0.14
RTN4-201ENST00000317610 ZNF256Q9Y2P7 627 aaPredicted RBP14.17□□□□□ -0.14
RTN4-201ENST00000317610 CRYBA4P53673 196 aa14.16□□□□□ -0.14
RTN4-201ENST00000317610 FAM74A4Q5TZK3 123 aa14.16□□□□□ -0.14
RTN4-201ENST00000317610 PIMREGQ9BSJ6 248 aa14.16□□□□□ -0.14
RTN4-201ENST00000317610 ZNF580Q9UK33 172 aa14.16□□□□□ -0.14
RTN4-201ENST00000317610 P0DMU3 169 aa14.16□□□□□ -0.14
RTN4-201ENST00000317610 FAM231AP0DMU4 169 aa14.16□□□□□ -0.14
RTN4-201ENST00000317610 FAM231CP0DMU5 169 aa14.16□□□□□ -0.14
RTN4-201ENST00000317610 TRPT1Q86TN4 253 aaKnown RBP14.16□□□□□ -0.14
RTN4-201ENST00000317610 A8MWV9 139 aa14.15□□□□□ -0.14
RTN4-201ENST00000317610 ZNF56Q15929 161 aa14.15□□□□□ -0.14
RTN4-201ENST00000317610 A0A0J9YX75 114 aa14.15□□□□□ -0.14
RTN4-201ENST00000317610 CKS1BP61024 79 aa14.15□□□□□ -0.14
RTN4-201ENST00000317610 COL6A6A6NMZ7 2263 aa14.14□□□□□ -0.15
RTN4-201ENST00000317610 M0QXV9 152 aa14.14□□□□□ -0.15
RTN4-201ENST00000317610 EIF4EBP3O60516 100 aaPredicted RBP14.14□□□□□ -0.15
RTN4-201ENST00000317610 C20orf203Q8NBC4 194 aa14.14□□□□□ -0.15
RTN4-201ENST00000317610 OPRPNQ99935 248 aaPredicted RBP14.14□□□□□ -0.15
RTN4-201ENST00000317610 ZNF22P17026 224 aaPredicted RBP14.14□□□□□ -0.15
RTN4-201ENST00000317610 Q8N1Y9 231 aa14.14□□□□□ -0.15
RTN4-201ENST00000317610 IGF2RP11717 2491 aa14.14□□□□□ -0.15
RTN4-201ENST00000317610 A0A0B4J2C4 111 aa14.13□□□□□ -0.15
RTN4-201ENST00000317610 A4D1N5 150 aa14.13□□□□□ -0.15
RTN4-201ENST00000317610 Q6ZUT4 128 aa14.13□□□□□ -0.15
RTN4-201ENST00000317610 C10orf105Q8TEF2 133 aa14.13□□□□□ -0.15
RTN4-201ENST00000317610 TMEM263Q8WUH6 116 aaKnown RBP14.13□□□□□ -0.15
RTN4-201ENST00000317610 IGHV1OR15-1A0A075B7D0 117 aa14.13□□□□□ -0.15
RTN4-201ENST00000317610 RHODO00212 210 aa14.13□□□□□ -0.15
RTN4-201ENST00000317610 IGHV3-33P01772 117 aa14.13□□□□□ -0.15
RTN4-201ENST00000317610 SPINK8P0C7L1 97 aa14.12□□□□□ -0.15
RTN4-201ENST00000317610 ZNF688P0C7X2 276 aa14.12□□□□□ -0.15
RTN4-201ENST00000317610 AKAP6Q13023 2319 aa14.12□□□□□ -0.15
RTN4-201ENST00000317610 TRAV12-2A0A075B6T6 113 aa14.12□□□□□ -0.15
RTN4-201ENST00000317610 MT-ATP8P03928 68 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms