RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TET2Q6N021 2002 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 TRAV8-3A0A0A6YYJ7 113 aa8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 A8MWP6 167 aa8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 DEFB105AQ8NG35 78 aa8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 STPG4Q8N801 248 aa8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 PRAC2D3DTV9 90 aa8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 NPYP01303 97 aa8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 TRBV7-3A0A075B6L6 115 aa8.19□□□□□ -1.1
SYNPO2-201ENST00000307142 TRAV8-4A0A0B4J246 113 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 FAM231DQ6ZW35 169 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 DEFB131BA0A096LNP1 70 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 PRB2P02812 416 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 SAMD5Q5TGI4 173 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 RPL39LQ96EH5 51 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 ZNF479Q96JC4 524 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 HIVEP3Q5T1R4 2406 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 GAGE2BQ13066 116 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 FANCD2OSQ96PS1 177 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 WDR87Q6ZQQ6 2873 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 PTPRBP23467 1997 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 IGLV2-14P01704 120 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 C10orf99Q6UWK7 81 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 LINC01006Q8NI28 216 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 CCDC140Q96MF4 163 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 KLK12Q9UKR0 248 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 TRAV26-1A0A087WT03 109 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 A0A087X0K7 114 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 DEFB114Q30KQ6 69 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 MORN5Q5VZ52 161 aa8.18□□□□□ -1.1
SYNPO2-201ENST00000307142 IGF1P05019 195 aa8.17□□□□□ -1.1
SYNPO2-201ENST00000307142 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
SYNPO2-201ENST00000307142 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
SYNPO2-201ENST00000307142 MBD6Q96DN6 1003 aa8.17□□□□□ -1.1
SYNPO2-201ENST00000307142 PIEZO1Q92508 2521 aa8.17□□□□□ -1.1
SYNPO2-201ENST00000307142 FSTL3O95633 263 aa8.17□□□□□ -1.1
SYNPO2-201ENST00000307142 ZNF702PQ9H963 129 aa8.17□□□□□ -1.1
SYNPO2-201ENST00000307142 ATG2AQ2TAZ0 1938 aa8.17□□□□□ -1.1
SYNPO2-201ENST00000307142 HIST3H2BBQ8N257 126 aa8.16□□□□□ -1.1
SYNPO2-201ENST00000307142 LGALS9O00182 355 aa8.16□□□□□ -1.1
SYNPO2-201ENST00000307142 VSIG2Q96IQ7 327 aa8.16□□□□□ -1.1
SYNPO2-201ENST00000307142 IGF2RP11717 2491 aa8.16□□□□□ -1.1
SYNPO2-201ENST00000307142 TNRC6BQ9UPQ9 1833 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-201ENST00000307142 COLCA2A8K830 154 aa8.16□□□□□ -1.1
SYNPO2-201ENST00000307142 C18orf32Q8TCD1 76 aa8.16□□□□□ -1.1
SYNPO2-201ENST00000307142 MRPL36Q9P0J6 103 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-201ENST00000307142 TRAV4A0A0B4J268 109 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 A0A0J9YX75 114 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 K7EN84 100 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 PATE2Q6UY27 113 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 C20orf144Q9BQM9 153 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 IGHV4-4A0A075B6R2 117 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 C2orf82Q6UX34 121 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 PRO0255Q9UI72 69 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 PLXNB1O43157 2135 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 LY6G6CO95867 125 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 FAM222AQ5U5X8 452 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 ZFAND6Q6FIF0 208 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 PSMG3-AS1Q96PY0 264 aa8.15□□□□□ -1.1
SYNPO2-201ENST00000307142 HIST1H4AP62805 103 aaKnown RBP8.15□□□□□ -1.11
SYNPO2-201ENST00000307142 MDFICQ9P1T7 246 aa8.15□□□□□ -1.11
SYNPO2-201ENST00000307142 A0A1B0GV90 55 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 ZNF124Q15973 351 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 UBE2AP49459 152 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 C18orf65Q6ZTR6 163 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 ETDCA0A1B0GVM5 59 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 UTF1Q5T230 341 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 LINC00518Q8N0U6 118 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 SPANXA1Q9NS26 97 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
SYNPO2-201ENST00000307142 C9JQL5 133 aa8.13□□□□□ -1.11
SYNPO2-201ENST00000307142 NAA38Q9BRA0 125 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-201ENST00000307142 BOD1L2Q8IYS8 172 aa8.13□□□□□ -1.11
SYNPO2-201ENST00000307142 C11orf52Q96A22 123 aa8.13□□□□□ -1.11
SYNPO2-201ENST00000307142 BBC3Q96PG8 261 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-201ENST00000307142 NCOR2Q9Y618 2525 aa8.13□□□□□ -1.11
SYNPO2-201ENST00000307142 CRYGDP07320 174 aa8.13□□□□□ -1.11
SYNPO2-201ENST00000307142 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
SYNPO2-201ENST00000307142 M0R2N4 97 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 TIMM17AQ99595 171 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 SMIM9A6NGZ8 99 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 LINC00574Q9H8X3 128 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 TRAV13-2A0A0B4J235 113 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 LYRM9A8MSI8 78 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 C14orf177Q52M58 125 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 LY6LH3BQJ8 138 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 Q0VG73 95 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 Q9H8V8 135 aa8.12□□□□□ -1.11
SYNPO2-201ENST00000307142 IGLV2-18A0A075B6J9 118 aa8.11□□□□□ -1.11
SYNPO2-201ENST00000307142 PSMB8P28062 276 aa8.11□□□□□ -1.11
SYNPO2-201ENST00000307142 RBMY1FQ15415 496 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-201ENST00000307142 F8VRH5 84 aa8.11□□□□□ -1.11
SYNPO2-201ENST00000307142 NDUFA1O15239 70 aa8.11□□□□□ -1.11
SYNPO2-201ENST00000307142 ADCYAP1P18509 176 aa8.11□□□□□ -1.11
SYNPO2-201ENST00000307142 GTSF1Q8WW33 167 aa8.11□□□□□ -1.11
SYNPO2-201ENST00000307142 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms