RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 LGALS9O00182 355 aa9.81□□□□□ -0.84
USP38-201ENST00000307017 Q8N1Y9 231 aa9.81□□□□□ -0.84
USP38-201ENST00000307017 PIFOQ8TCI5 191 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 K7EQD1 137 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 ETV2O00321 342 aaPredicted RBP9.8□□□□□ -0.84
USP38-201ENST00000307017 TAX1BP3O14907 124 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 IGHV4-30-4P0DP06 118 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 IGHV4-31P0DP07 118 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 SERTAD4-AS1Q5TG53 156 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 DCANP1Q8TF63 244 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 IGKV2-24A0A0C4DH68 120 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 AJUBAQ96IF1 538 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 IGHV4-30-2A0A087WSY4 118 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 FAM110AQ9BQ89 295 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 OOSP1A8MZH6 123 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 MDFICQ9P1T7 246 aa9.8□□□□□ -0.84
USP38-201ENST00000307017 J3QKU1 62 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 NDUFV3P56181 108 aaKnown RBP9.79□□□□□ -0.84
USP38-201ENST00000307017 SPTBN2O15020 2390 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 DEFB135Q30KP9 77 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 Q6ZS92 163 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 X6R8D5 127 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 NCOA6Q14686 2063 aaPredicted RBP9.79□□□□□ -0.84
USP38-201ENST00000307017 NREPQ16612 68 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 Q6ZS49 121 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 C11orf52Q96A22 123 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 DEFB125Q8N687 156 aa9.79□□□□□ -0.84
USP38-201ENST00000307017 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 ABCA4P78363 2273 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 LY6G6EA0A0G2JKS1 128 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 CT83Q5H943 113 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 U3KQA8 63 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 FOXI1Q12951 378 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 K7ERS5 55 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 FOXL2NBQ6ZUU3 175 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 TMEM14CQ9P0S9 112 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 WISP2O76076 250 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 RNF138Q8WVD3 245 aa9.78□□□□□ -0.84
USP38-201ENST00000307017 MT-ATP8P03928 68 aa9.77□□□□□ -0.84
USP38-201ENST00000307017 NOTCH4Q99466 2003 aa9.77□□□□□ -0.84
USP38-201ENST00000307017 WT1P19544 449 aaPredicted RBP9.77□□□□□ -0.85
USP38-201ENST00000307017 PATE2Q6UY27 113 aa9.77□□□□□ -0.85
USP38-201ENST00000307017 CSRP1P21291 193 aaKnown RBP9.77□□□□□ -0.85
USP38-201ENST00000307017 RHOHQ15669 191 aa9.77□□□□□ -0.85
USP38-201ENST00000307017 COX7A2LO14548 114 aa9.77□□□□□ -0.85
USP38-201ENST00000307017 MED13Q9UHV7 2174 aa9.77□□□□□ -0.85
USP38-201ENST00000307017 KLK12Q9UKR0 248 aa9.77□□□□□ -0.85
USP38-201ENST00000307017 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 CFPP27918 469 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 PRR20EP86478 221 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 PRR20CP86479 221 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 PRR20DP86480 221 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 PRR20BP86481 221 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 PRR20AP86496 221 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 MIR7-3HGQ8N6C7 128 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 POM121L12Q8N7R1 296 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 CACNA1BQ00975 2339 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 NOTCH3Q9UM47 2321 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 TCL1BO95988 128 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 LYPD6BQ8NI32 183 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 MRPL36Q9P0J6 103 aaKnown RBP9.76□□□□□ -0.85
USP38-201ENST00000307017 FAM215AQ9Y5M1 114 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 C11orf53Q8IXP5 236 aa9.76□□□□□ -0.85
USP38-201ENST00000307017 PCNX1Q96RV3 2341 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
USP38-201ENST00000307017 NDUFB1O75438 58 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 IGHV4-61A0A0C4DH41 118 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 HERV-K104P63124 156 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 C22orf34Q6ZV56 151 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 C17orf82Q86X59 251 aaPredicted RBP9.75□□□□□ -0.85
USP38-201ENST00000307017 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 C20orf78Q9BR46 151 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 HHLA3Q9XRX5 114 aa9.75□□□□□ -0.85
USP38-201ENST00000307017 C11orf86A6NJI1 115 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 FUSP35637 526 aaKnown RBP eCLIP9.74□□□□□ -0.85
USP38-201ENST00000307017 SNURFQ9Y675 71 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 GP9P14770 177 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 LINC01620Q4KN68 170 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 IGF2-ASQ6U949 168 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 CACNA1GO43497 2377 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 G3V4G9 280 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 PRM2P04554 102 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 MED12LQ86YW9 2145 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 KIR2DL5BA0A0G2JN68 375 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 KIR2DL5BA0A0G2JPC4 375 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 KIR2DL5AQ8N109 375 aa9.74□□□□□ -0.85
USP38-201ENST00000307017 FAM236DA0A1B0GTK5 79 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 K7ENP7 123 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 FAM236CP0DP71 79 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 A8MZ25 164 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 SIVA1O15304 175 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 ZFP36P26651 326 aaKnown RBP9.73□□□□□ -0.85
USP38-201ENST00000307017 UBE2D1P51668 147 aa9.73□□□□□ -0.85
USP38-201ENST00000307017 Q6ZUT4 128 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms