RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SNCGO76070 127 aa8.2□□□□□ -1.1
ZNF558-201ENST00000301475 ASIPP42127 132 aa8.2□□□□□ -1.1
ZNF558-201ENST00000301475 VMO1Q7Z5L0 202 aa8.2□□□□□ -1.1
ZNF558-201ENST00000301475 Q8N1Y9 231 aa8.2□□□□□ -1.1
ZNF558-201ENST00000301475 Q8N9W7 124 aa8.2□□□□□ -1.1
ZNF558-201ENST00000301475 FAM110DQ8TAY7 271 aaPredicted RBP8.2□□□□□ -1.1
ZNF558-201ENST00000301475 ARL3P36405 182 aa8.2□□□□□ -1.1
ZNF558-201ENST00000301475 C16orf92Q96LL3 132 aa8.2□□□□□ -1.1
ZNF558-201ENST00000301475 IGHV1-69DA0A0B4J2H0 117 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 J3QQQ9 107 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 M0QXV9 152 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 ATP6V0E1O15342 81 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 TMEM263Q8WUH6 116 aaKnown RBP8.19□□□□□ -1.1
ZNF558-201ENST00000301475 ITLN2Q8WWU7 325 aaPredicted RBP8.19□□□□□ -1.1
ZNF558-201ENST00000301475 METTL26Q96S19 204 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 RNASE3P12724 160 aaKnown RBP8.19□□□□□ -1.1
ZNF558-201ENST00000301475 LINC00315P59091 139 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 PAPPA-AS1Q5QFB9 102 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 SPG11Q96JI7 2443 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 CENPEQ02224 2701 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 TEX49A0A1B0GTD5 131 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 G3V318 75 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 GNRH2O43555 120 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 EBI3Q14213 229 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 U3KQE9 123 aa8.19□□□□□ -1.1
ZNF558-201ENST00000301475 TRAV21A0A0B4J279 112 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE12JA6NER3 117 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE7O76087 117 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE4Q13068 117 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 SHISA2Q6UWI4 295 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 FLNCQ14315 2725 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 ZNF876PQ49A33 203 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 JPT2Q9H910 190 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 KIF25-AS1Q9Y6Z4 181 aa8.18□□□□□ -1.1
ZNF558-201ENST00000301475 M0R1W7 72 aa8.17□□□□□ -1.1
ZNF558-201ENST00000301475 CD3EP07766 207 aa8.17□□□□□ -1.1
ZNF558-201ENST00000301475 LINC01620Q4KN68 170 aa8.17□□□□□ -1.1
ZNF558-201ENST00000301475 TRAV2A0A0B4J234 112 aa8.17□□□□□ -1.1
ZNF558-201ENST00000301475 IFITM1P13164 125 aa8.17□□□□□ -1.1
ZNF558-201ENST00000301475 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
ZNF558-201ENST00000301475 POLR2KP53803 58 aaKnown RBP8.17□□□□□ -1.1
ZNF558-201ENST00000301475 P0DMU3 169 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 FAM231AP0DMU4 169 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 FAM231CP0DMU5 169 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 C9orf139Q6ZV77 190 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 POM121L12Q8N7R1 296 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 TIMM17AQ99595 171 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 CELSR1Q9NYQ6 3014 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 F6UB75 175 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 IGHV4-39P01824 125 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 RPL32P62910 135 aaKnown RBP8.16□□□□□ -1.1
ZNF558-201ENST00000301475 MUSTN1Q8IVN3 82 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 SMIM20Q8N5G0 67 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
ZNF558-201ENST00000301475 CRYBG3Q68DQ2 2970 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 IGHV3-64A0A075B6Q5 118 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 IGHV4OR15-8A0A075B7B6 117 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 A0A087WW49 117 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 RNASE4P34096 147 aaKnown RBP8.16□□□□□ -1.1
ZNF558-201ENST00000301475 HERV-K104P63124 156 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 LY6DQ14210 128 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 KLK9Q2XQG4 91 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 SUMO4Q6EEV6 95 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 FAM159AQ6UWV7 190 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 ZNF580Q9UK33 172 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 KLK9Q9UKQ9 250 aa8.16□□□□□ -1.1
ZNF558-201ENST00000301475 IGSF10Q6WRI0 2623 aa8.15□□□□□ -1.1
ZNF558-201ENST00000301475 PPP1R17O96001 155 aa8.15□□□□□ -1.1
ZNF558-201ENST00000301475 Q6Q795 121 aa8.15□□□□□ -1.1
ZNF558-201ENST00000301475 C1orf122Q6ZSJ8 110 aa8.15□□□□□ -1.1
ZNF558-201ENST00000301475 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.1
ZNF558-201ENST00000301475 LINC01560Q8TB33 94 aa8.15□□□□□ -1.1
ZNF558-201ENST00000301475 TMEM141Q96I45 108 aa8.15□□□□□ -1.1
ZNF558-201ENST00000301475 BEX4Q9NWD9 120 aaPredicted RBP8.15□□□□□ -1.1
ZNF558-201ENST00000301475 NXPH4O95158 308 aa8.15□□□□□ -1.11
ZNF558-201ENST00000301475 MED14OSP0DP75 135 aa8.15□□□□□ -1.11
ZNF558-201ENST00000301475 RPL13AP40429 203 aaKnown RBP8.15□□□□□ -1.11
ZNF558-201ENST00000301475 Q1RN00 199 aa8.15□□□□□ -1.11
ZNF558-201ENST00000301475 CFAP161Q6P656 301 aa8.15□□□□□ -1.11
ZNF558-201ENST00000301475 LINC00477Q96M19 166 aa8.15□□□□□ -1.11
ZNF558-201ENST00000301475 SDHAF1A6NFY7 115 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 EEF1AKMT3Q96AZ1 226 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 FAM110AQ9BQ89 295 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 FAM208BQ5VWN6 2430 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 A0A087WWL8 130 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 TRAV8-4A0A0B4J246 113 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 TMEM223A0PJW6 202 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 SOCS3O14543 225 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 TRIAP1O43715 76 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 ATXN8Q156A1 80 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 OR10J6PQ8NGY7 276 aa8.14□□□□□ -1.11
ZNF558-201ENST00000301475 FAM19A4Q96LR4 140 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms