RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZFAND2AQ8N6M9 145 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 AJUBAQ96IF1 538 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 SPG11Q96JI7 2443 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 CRLF1O75462 422 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 ZNF56Q15929 161 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 ZNRF2Q8NHG8 242 aa11.08□□□□□ -0.64
COL6A2-201ENST00000300527 SDHAF1A6NFY7 115 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 CCL21O00585 134 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 HTN1P15515 57 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 SAA4P35542 130 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 GAGE5Q13069 117 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 GAGE6Q13070 117 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 Q8NA96 180 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 ZNF580Q9UK33 172 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 LINC01619G3V211 115 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 M0R1W7 72 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 NOTCH3Q9UM47 2321 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 TRAV12-3A0A0B4J271 114 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 TEX49A0A1B0GTD5 131 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 MUSTN1Q8IVN3 82 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
COL6A2-201ENST00000300527 ELANEP08246 267 aa11.06□□□□□ -0.64
COL6A2-201ENST00000300527 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
COL6A2-201ENST00000300527 DOPEY2Q9Y3R5 2298 aa11.06□□□□□ -0.64
COL6A2-201ENST00000300527 IGHV4-4A0A075B6R2 117 aa11.06□□□□□ -0.64
COL6A2-201ENST00000300527 TMEM262E9PQX1 116 aa11.06□□□□□ -0.64
COL6A2-201ENST00000300527 RNASE13Q5GAN3 156 aaKnown RBP11.06□□□□□ -0.64
COL6A2-201ENST00000300527 FAM159AQ6UWV7 190 aa11.06□□□□□ -0.64
COL6A2-201ENST00000300527 C9orf139Q6ZV77 190 aa11.06□□□□□ -0.64
COL6A2-201ENST00000300527 RNF223E7ERA6 249 aa11.05□□□□□ -0.64
COL6A2-201ENST00000300527 LY6EQ16553 131 aa11.05□□□□□ -0.64
COL6A2-201ENST00000300527 Q8N6K4 173 aa11.05□□□□□ -0.64
COL6A2-201ENST00000300527 CCDC179H3BU77 68 aa11.05□□□□□ -0.64
COL6A2-201ENST00000300527 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
COL6A2-201ENST00000300527 SLC25A29Q8N8R3 303 aa11.05□□□□□ -0.64
COL6A2-201ENST00000300527 RNASE3P12724 160 aaKnown RBP11.05□□□□□ -0.64
COL6A2-201ENST00000300527 SPXQ9BT56 116 aa11.04□□□□□ -0.64
COL6A2-201ENST00000300527 COL12A1Q99715 3063 aa11.04□□□□□ -0.64
COL6A2-201ENST00000300527 Q8N1Y9 231 aa11.04□□□□□ -0.64
COL6A2-201ENST00000300527 TRAV12-2A0A075B6T6 113 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 A0A0J9YXV3 536 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 PTPRQQ9UMZ3 2332 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 IGHV3-73A0A0B4J1V6 119 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 TRAV8-4A0A0B4J246 113 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 VCYO14598 125 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 PF4V1P10720 104 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 CDSNQ15517 529 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 SMIM20Q8N5G0 67 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 C15orf53Q8NAA6 179 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 IGF2RP11717 2491 aa11.03□□□□□ -0.64
COL6A2-201ENST00000300527 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
COL6A2-201ENST00000300527 Q6ZSV7 163 aa11.02□□□□□ -0.65
COL6A2-201ENST00000300527 TRBV7-1A0A0A6YYK4 115 aa11.02□□□□□ -0.65
COL6A2-201ENST00000300527 IGHV3-33P01772 117 aa11.02□□□□□ -0.65
COL6A2-201ENST00000300527 BRD3OSQ6XYD6 125 aa11.02□□□□□ -0.65
COL6A2-201ENST00000300527 TRAV41A0A0B4J266 112 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 VCX2Q9H322 139 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 CELSR1Q9NYQ6 3014 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 MUC4Q99102 2169 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 OVOL1O14753 267 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 EDN2P20800 178 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 NDUFV3P56181 108 aaKnown RBP11.01□□□□□ -0.65
COL6A2-201ENST00000300527 PPP1R17O96001 155 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 LINC01620Q4KN68 170 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 MINOS1Q5TGZ0 78 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
COL6A2-201ENST00000300527 MINOS1-NBL1R4GNA1 71 aa11.01□□□□□ -0.65
COL6A2-201ENST00000300527 CSPG4Q6UVK1 2322 aa11□□□□□ -0.65
COL6A2-201ENST00000300527 C2orf82Q6UX34 121 aa11□□□□□ -0.65
COL6A2-201ENST00000300527 KLK9Q9UKQ9 250 aa11□□□□□ -0.65
COL6A2-201ENST00000300527 A0A0U1RRA0 63 aa11□□□□□ -0.65
COL6A2-201ENST00000300527 EIF4EBP3O60516 100 aaPredicted RBP11□□□□□ -0.65
COL6A2-201ENST00000300527 C2CD3Q4AC94 2353 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 NACAE9PAV3 2078 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 GAGE7O76087 117 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 IFITM1P13164 125 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 GAGE4Q13068 117 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 ATXN8Q156A1 80 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 CEMP1Q6PRD7 247 aaPredicted RBP10.99□□□□□ -0.65
COL6A2-201ENST00000300527 TRAV8-3A0A0A6YYJ7 113 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 NHLRC4P0CG21 123 aaPredicted RBP10.99□□□□□ -0.65
COL6A2-201ENST00000300527 ITLN2Q8WWU7 325 aaPredicted RBP10.99□□□□□ -0.65
COL6A2-201ENST00000300527 RHPN1-AS1Q9BWJ2 59 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 A8MZ25 164 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 CLEC2BQ92478 149 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 DUX3Q96PT4 197 aa10.99□□□□□ -0.65
COL6A2-201ENST00000300527 ZNF292O60281 2723 aa10.98□□□□□ -0.65
COL6A2-201ENST00000300527 EBI3Q14213 229 aa10.98□□□□□ -0.65
COL6A2-201ENST00000300527 TMEM141Q96I45 108 aa10.98□□□□□ -0.65
COL6A2-201ENST00000300527 MDFICQ9P1T7 246 aa10.98□□□□□ -0.65
COL6A2-201ENST00000300527 CENPVL3A0A0U1RRI6 287 aa10.97□□□□□ -0.65
COL6A2-201ENST00000300527 OOSP1A8MZH6 123 aa10.97□□□□□ -0.65
COL6A2-201ENST00000300527 ZNF876PQ49A33 203 aa10.97□□□□□ -0.65
COL6A2-201ENST00000300527 DAND5Q8N907 189 aa10.97□□□□□ -0.65
COL6A2-201ENST00000300527 TMEM263Q8WUH6 116 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms