RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PCP2Q8IVA1 136 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 CACNA1AO00555 2505 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 CENPVL3A0A0U1RRI6 287 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 FOXL2NBQ6ZUU3 175 aa4.38□□□□□ -1.71
CPSF2-201ENST00000298875 NCR3O14931 201 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 TRAV4A0A0B4J268 109 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 RBX1P62877 108 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 FOXE3Q13461 319 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 EIF4EBP1Q13541 118 aaPredicted RBP4.37□□□□□ -1.71
CPSF2-201ENST00000298875 FHL1Q13642 323 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 ZNF747Q9BV97 191 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 KIF26AQ9ULI4 1882 aaPredicted RBP4.37□□□□□ -1.71
CPSF2-201ENST00000298875 CDPF1Q6NVV7 123 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 PRR14LQ5THK1 2151 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 C9orf47Q6ZRZ4 202 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 RETNQ9HD89 108 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 KIR2DL5BQ8NHK3 375 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 NUP210Q8TEM1 1887 aaPredicted RBP4.37□□□□□ -1.71
CPSF2-201ENST00000298875 TMEM131Q92545 1883 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 K7EQD1 137 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 SP5Q6BEB4 398 aaPredicted RBP4.37□□□□□ -1.71
CPSF2-201ENST00000298875 C17orf82Q86X59 251 aaPredicted RBP4.37□□□□□ -1.71
CPSF2-201ENST00000298875 TNCP24821 2201 aa4.37□□□□□ -1.71
CPSF2-201ENST00000298875 Q6ZR03 302 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 ZNF503-AS2A6NEH8 195 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 SPRY2O43597 315 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 LMO1P25800 156 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 IGLV2-23P01705 113 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 ETDCA0A1B0GVM5 59 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 PLXNB3Q9ULL4 1909 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 J3QLI3 93 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 PIP4P1Q86T03 277 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 MED13Q9UHV7 2174 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 P0DMU3 169 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 FAM231AP0DMU4 169 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 FAM231CP0DMU5 169 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 MED14OSP0DP75 135 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 CCL18P55774 89 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 DEFB136Q30KP8 78 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 PTPRQQ9UMZ3 2332 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 SPG11Q96JI7 2443 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 E9PLD3 99 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 K7EM74 188 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 LOXP28300 417 aaPredicted RBP4.36□□□□□ -1.71
CPSF2-201ENST00000298875 APRG1Q8IVJ8 170 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 TIMM17AQ99595 171 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 C15orf65H3BRN8 121 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 M0QXV9 152 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 GATA1P15976 413 aaPredicted RBP4.36□□□□□ -1.71
CPSF2-201ENST00000298875 TET1Q8NFU7 2136 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 RNF183Q96D59 192 aa4.36□□□□□ -1.71
CPSF2-201ENST00000298875 TRBV6-1A0A0K0K1D8 114 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 C5orf38Q86SI9 138 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 ZNF503Q96F45 646 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 MLST8Q9BVC4 326 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 TMEM256-PLSCR3K7ERE1 68 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 EML5Q05BV3 1969 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 PRSS33Q8NF86 280 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 IGHV1-58A0A0C4DH39 117 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 NREPQ16612 68 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 CAMK2N2Q96S95 79 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 CLEC2BQ92478 149 aa4.35□□□□□ -1.71
CPSF2-201ENST00000298875 IGHV3-30P01768 117 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 IGHV3-33P01772 117 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 IGHV3-30-3P0DP02 117 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 IGHV3-30-5P0DP03 117 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 GYPEP15421 78 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 CTRLP40313 264 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 TMEM61Q8N0U2 210 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 PRORYQ9H606 182 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 ZNF106Q9H2Y7 1883 aaKnown RBP4.34□□□□□ -1.71
CPSF2-201ENST00000298875 IGLV3-9A0A075B6K5 115 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 GPHB5Q86YW7 130 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 MRPL36Q9P0J6 103 aaKnown RBP4.34□□□□□ -1.71
CPSF2-201ENST00000298875 SORL1Q92673 2214 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 A4D1N5 150 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 CCL24O00175 119 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 COX7A2LO14548 114 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 HIST2H2BCQ6DN03 193 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 SND1-IT1Q9HBX3 110 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 TRBV12-3P01733 135 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 LINC00311Q8N616 119 aa4.34□□□□□ -1.71
CPSF2-201ENST00000298875 C11orf86A6NJI1 115 aa4.34□□□□□ -1.72
CPSF2-201ENST00000298875 LGALS9O00182 355 aa4.34□□□□□ -1.72
CPSF2-201ENST00000298875 ZNF491Q8N8L2 437 aa4.34□□□□□ -1.72
CPSF2-201ENST00000298875 LINC00526Q96FQ7 95 aa4.34□□□□□ -1.72
CPSF2-201ENST00000298875 TP73-AS1Q9UF72 201 aa4.34□□□□□ -1.72
CPSF2-201ENST00000298875 SMIM9A6NGZ8 99 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 SEM1Q6ZVN7 128 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 SPTSSBQ8NFR3 76 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 AGPAT4-IT1Q9H0P7 198 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 LINC00173Q6ZV60 143 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 HCFC1P51610 2035 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 ANAPC1Q9H1A4 1944 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 ETV2O00321 342 aaPredicted RBP4.33□□□□□ -1.72
CPSF2-201ENST00000298875 SLURP1P55000 103 aa4.33□□□□□ -1.72
CPSF2-201ENST00000298875 RPL39P62891 51 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms