RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZMAT4Q9H898 229 aa13.03□□□□□ -0.32
TSPAN3-201ENST00000267970 TEN1Q86WV5 123 aa13.02□□□□□ -0.32
TSPAN3-201ENST00000267970 COX7A2LO14548 114 aa13.02□□□□□ -0.32
TSPAN3-201ENST00000267970 FAM110AQ9BQ89 295 aa13.02□□□□□ -0.32
TSPAN3-201ENST00000267970 ELANEP08246 267 aa13.02□□□□□ -0.33
TSPAN3-201ENST00000267970 SRSF2Q01130 221 aaKnown RBP13.02□□□□□ -0.33
TSPAN3-201ENST00000267970 IGLV1-44P01699 117 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 GP9P14770 177 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 ATP6V0E2Q8NHE4 81 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 G3V4G9 280 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 NDUFB1O75438 58 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 IGKV4-1P06312 121 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 HIST2H2BDQ6DRA6 164 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 F8W735 103 aaPredicted RBP13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 ATP5G1P05496 136 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 P0DMU3 169 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 FAM231AP0DMU4 169 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 FAM231CP0DMU5 169 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 MRPL55Q7Z7F7 128 aaKnown RBP13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 LTBP1Q14766 1721 aa13.01□□□□□ -0.33
TSPAN3-201ENST00000267970 A0A0J9YWU9 116 aa13□□□□□ -0.33
TSPAN3-201ENST00000267970 FNDC1Q4ZHG4 1894 aaPredicted RBP13□□□□□ -0.33
TSPAN3-201ENST00000267970 NCKAP5O14513 1909 aa13□□□□□ -0.33
TSPAN3-201ENST00000267970 WI2-2373I1.2A0A1W2PRP0 233 aa13□□□□□ -0.33
TSPAN3-201ENST00000267970 SEC61GP60059 68 aa13□□□□□ -0.33
TSPAN3-201ENST00000267970 E7EUB6 86 aa13□□□□□ -0.33
TSPAN3-201ENST00000267970 NDUFV3P56181 108 aaKnown RBP13□□□□□ -0.33
TSPAN3-201ENST00000267970 A0A096LNI7 61 aa12.99□□□□□ -0.33
TSPAN3-201ENST00000267970 IGHV7-81A0A0B4J1V7 117 aa12.99□□□□□ -0.33
TSPAN3-201ENST00000267970 I3L2K1 104 aa12.99□□□□□ -0.33
TSPAN3-201ENST00000267970 SDIM1Q6ZPB5 146 aa12.99□□□□□ -0.33
TSPAN3-201ENST00000267970 IGHV4-30-2A0A087WSY4 118 aa12.99□□□□□ -0.33
TSPAN3-201ENST00000267970 POU2AF1Q16633 256 aa12.99□□□□□ -0.33
TSPAN3-201ENST00000267970 PLXNA3P51805 1871 aa12.99□□□□□ -0.33
TSPAN3-201ENST00000267970 IGHV4-61A0A0C4DH41 118 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 K7EIM0 57 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 UBE2AP49459 152 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 LINC01545Q5VT33 79 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 IL15RAQ13261 267 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 TRBV12-3P01733 135 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 ZGRF1Q86YA3 2104 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 ACACAQ13085 2346 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 LOXL1Q08397 574 aaPredicted RBP12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 VPREB3Q9UKI3 123 aa12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 SPTAN1Q13813 2472 aaKnown RBP12.98□□□□□ -0.33
TSPAN3-201ENST00000267970 HIGD2BQ4VC39 106 aa12.97□□□□□ -0.33
TSPAN3-201ENST00000267970 MT-ATP8P03928 68 aa12.97□□□□□ -0.33
TSPAN3-201ENST00000267970 WT1P19544 449 aaPredicted RBP12.97□□□□□ -0.33
TSPAN3-201ENST00000267970 PCNX1Q96RV3 2341 aa12.97□□□□□ -0.33
TSPAN3-201ENST00000267970 CENPVL3A0A0U1RRI6 287 aa12.97□□□□□ -0.33
TSPAN3-201ENST00000267970 C11orf86A6NJI1 115 aa12.96□□□□□ -0.33
TSPAN3-201ENST00000267970 MIR7-3HGQ8N6C7 128 aa12.96□□□□□ -0.33
TSPAN3-201ENST00000267970 MDFICQ9P1T7 246 aa12.96□□□□□ -0.33
TSPAN3-201ENST00000267970 LYPD6BQ8NI32 183 aa12.96□□□□□ -0.33
TSPAN3-201ENST00000267970 SPANXCQ9NY87 97 aa12.96□□□□□ -0.33
TSPAN3-201ENST00000267970 NFE4Q86UQ8 179 aa12.96□□□□□ -0.34
TSPAN3-201ENST00000267970 C20orf197Q8N268 126 aa12.96□□□□□ -0.34
TSPAN3-201ENST00000267970 MRPL36Q9P0J6 103 aaKnown RBP12.96□□□□□ -0.34
TSPAN3-201ENST00000267970 DEFB135Q30KP9 77 aa12.95□□□□□ -0.34
TSPAN3-201ENST00000267970 CTSGP08311 255 aa12.95□□□□□ -0.34
TSPAN3-201ENST00000267970 UPK3BQ9BT76 320 aa12.95□□□□□ -0.34
TSPAN3-201ENST00000267970 HHLA3Q9XRX5 114 aa12.95□□□□□ -0.34
TSPAN3-201ENST00000267970 TM2D2Q9BX73 214 aa12.95□□□□□ -0.34
TSPAN3-201ENST00000267970 KLK12Q9UKR0 248 aa12.95□□□□□ -0.34
TSPAN3-201ENST00000267970 RNF152Q8N8N0 203 aa12.95□□□□□ -0.34
TSPAN3-201ENST00000267970 IGLV3-1P01715 115 aa12.94□□□□□ -0.34
TSPAN3-201ENST00000267970 IGKV1-17P01599 117 aa12.94□□□□□ -0.34
TSPAN3-201ENST00000267970 SLPIP03973 132 aa12.94□□□□□ -0.34
TSPAN3-201ENST00000267970 TP53TG3Q9ULZ0 132 aa12.94□□□□□ -0.34
TSPAN3-201ENST00000267970 SIP14410 1827 aa12.94□□□□□ -0.34
TSPAN3-201ENST00000267970 ZSWIM8A7E2V4 1837 aa12.93□□□□□ -0.34
TSPAN3-201ENST00000267970 TRBV10-2A0A0K0K1G8 114 aa12.93□□□□□ -0.34
TSPAN3-201ENST00000267970 C16orf74Q96GX8 76 aa12.93□□□□□ -0.34
TSPAN3-201ENST00000267970 TOMM6Q96B49 74 aa12.93□□□□□ -0.34
TSPAN3-201ENST00000267970 MED13Q9UHV7 2174 aa12.92□□□□□ -0.34
TSPAN3-201ENST00000267970 TCL1BO95988 128 aa12.92□□□□□ -0.34
TSPAN3-201ENST00000267970 H0YGX0 51 aa12.92□□□□□ -0.34
TSPAN3-201ENST00000267970 C10orf105Q8TEF2 133 aa12.92□□□□□ -0.34
TSPAN3-201ENST00000267970 NBASA2RRP1 2371 aa12.91□□□□□ -0.34
TSPAN3-201ENST00000267970 IGKV2-24A0A0C4DH68 120 aa12.91□□□□□ -0.34
TSPAN3-201ENST00000267970 C16orf54Q6UWD8 224 aa12.91□□□□□ -0.34
TSPAN3-201ENST00000267970 MGAMO43451 1857 aa12.91□□□□□ -0.34
TSPAN3-201ENST00000267970 FAM167A-AS1Q96KT0 104 aa12.91□□□□□ -0.34
TSPAN3-201ENST00000267970 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 PLXNA4Q9HCM2 1894 aa12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 TEX49A0A1B0GTD5 131 aa12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 DAZ2Q13117 558 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 Q6ZUT4 128 aa12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 DAZ4Q86SG3 579 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 DAZ3Q9NR90 486 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 LRCOL1A6NCL2 159 aa12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 J3QLI3 93 aa12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 SIRPDQ9H106 197 aa12.9□□□□□ -0.34
TSPAN3-201ENST00000267970 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.35
TSPAN3-201ENST00000267970 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.35
TSPAN3-201ENST00000267970 UNQ9165/PRO28630Q6UXU0 137 aa12.89□□□□□ -0.35
TSPAN3-201ENST00000267970 MED13LQ71F56 2210 aa12.89□□□□□ -0.35
TSPAN3-201ENST00000267970 C3orf22Q8N5N4 141 aa12.89□□□□□ -0.35
TSPAN3-201ENST00000267970 IGLC6P0CF74 106 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms