RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MP68P56378 58 aa13.88□□□□□ -0.19
COL5A3-201ENST00000264828 FOXI1Q12951 378 aa13.88□□□□□ -0.19
COL5A3-201ENST00000264828 MRPL36Q9P0J6 103 aaKnown RBP13.88□□□□□ -0.19
COL5A3-201ENST00000264828 FAM167A-AS1Q96KT0 104 aa13.87□□□□□ -0.19
COL5A3-201ENST00000264828 C9orf66Q5T8R8 295 aa13.87□□□□□ -0.19
COL5A3-201ENST00000264828 ATP5G1P05496 136 aa13.87□□□□□ -0.19
COL5A3-201ENST00000264828 SEM1Q6ZVN7 128 aa13.87□□□□□ -0.19
COL5A3-201ENST00000264828 SPTBN1Q01082 2364 aaKnown RBP13.86□□□□□ -0.19
COL5A3-201ENST00000264828 F8W735 103 aaPredicted RBP13.86□□□□□ -0.19
COL5A3-201ENST00000264828 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
COL5A3-201ENST00000264828 WI2-2373I1.2A0A1W2PRP0 233 aa13.86□□□□□ -0.19
COL5A3-201ENST00000264828 SPART-AS1P0CW21 52 aa13.86□□□□□ -0.19
COL5A3-201ENST00000264828 NDUFB1O75438 58 aa13.85□□□□□ -0.19
COL5A3-201ENST00000264828 IGFL2Q6UWQ7 119 aa13.85□□□□□ -0.19
COL5A3-201ENST00000264828 EML6Q6ZMW3 1958 aa13.85□□□□□ -0.19
COL5A3-201ENST00000264828 C11orf86A6NJI1 115 aa13.85□□□□□ -0.19
COL5A3-201ENST00000264828 UBE2AP49459 152 aa13.85□□□□□ -0.19
COL5A3-201ENST00000264828 HHLA3Q9XRX5 114 aa13.85□□□□□ -0.19
COL5A3-201ENST00000264828 C5orf56Q8N8D9 126 aa13.85□□□□□ -0.19
COL5A3-201ENST00000264828 RNF152Q8N8N0 203 aa13.85□□□□□ -0.19
COL5A3-201ENST00000264828 NDUFC2O95298 119 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 CRYGBP07316 175 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 Q8N9W7 124 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 PTH2Q96A98 100 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 GVINP1Q7Z2Y8 2422 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 COL6A6A6NMZ7 2263 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 USF3Q68DE3 2245 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 EP300Q09472 2414 aaPredicted RBP13.84□□□□□ -0.19
COL5A3-201ENST00000264828 TRBV7-3A0A075B6L6 115 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 KRTAP27-1Q3LI81 207 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 ZNF407Q9C0G0 2248 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 E9PLD3 99 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 IGF2-ASQ6U949 168 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 NRGNQ92686 78 aa13.84□□□□□ -0.19
COL5A3-201ENST00000264828 TRBV10-2A0A0K0K1G8 114 aa13.83□□□□□ -0.19
COL5A3-201ENST00000264828 J3KT08 172 aa13.83□□□□□ -0.19
COL5A3-201ENST00000264828 WFDC11Q8NEX6 87 aa13.83□□□□□ -0.2
COL5A3-201ENST00000264828 CCL18P55774 89 aa13.83□□□□□ -0.2
COL5A3-201ENST00000264828 E7EUB6 86 aa13.83□□□□□ -0.2
COL5A3-201ENST00000264828 HIGD1BQ9P298 99 aa13.83□□□□□ -0.2
COL5A3-201ENST00000264828 TEX22C9J3V5 150 aa13.82□□□□□ -0.2
COL5A3-201ENST00000264828 NDUFA1O15239 70 aa13.82□□□□□ -0.2
COL5A3-201ENST00000264828 DEFB113Q30KQ7 82 aa13.82□□□□□ -0.2
COL5A3-201ENST00000264828 MIR7-3HGQ8N6C7 128 aa13.82□□□□□ -0.2
COL5A3-201ENST00000264828 C2orf70A6NJV1 201 aa13.81□□□□□ -0.2
COL5A3-201ENST00000264828 NFE4Q86UQ8 179 aa13.81□□□□□ -0.2
COL5A3-201ENST00000264828 CEMP1Q6PRD7 247 aaPredicted RBP13.81□□□□□ -0.2
COL5A3-201ENST00000264828 TNRC6BQ9UPQ9 1833 aaKnown RBP13.81□□□□□ -0.2
COL5A3-201ENST00000264828 ABCA1O95477 2261 aa13.81□□□□□ -0.2
COL5A3-201ENST00000264828 PKDREJQ9NTG1 2253 aa13.81□□□□□ -0.2
COL5A3-201ENST00000264828 ODF1Q14990 250 aa13.81□□□□□ -0.2
COL5A3-201ENST00000264828 ROS1P08922 2347 aa13.8□□□□□ -0.2
COL5A3-201ENST00000264828 G3V4G9 280 aa13.8□□□□□ -0.2
COL5A3-201ENST00000264828 PROP1O75360 226 aa13.8□□□□□ -0.2
COL5A3-201ENST00000264828 DENND4CQ5VZ89 1909 aa13.8□□□□□ -0.2
COL5A3-201ENST00000264828 MDFICQ9P1T7 246 aa13.8□□□□□ -0.2
COL5A3-201ENST00000264828 IGLV2-14P01704 120 aa13.79□□□□□ -0.2
COL5A3-201ENST00000264828 RNF183Q96D59 192 aa13.79□□□□□ -0.2
COL5A3-201ENST00000264828 IGKV2D-26A0A0A0MRZ7 120 aa13.79□□□□□ -0.2
COL5A3-201ENST00000264828 SVIPQ8NHG7 77 aa13.79□□□□□ -0.2
COL5A3-201ENST00000264828 DIRC1Q969H9 104 aa13.79□□□□□ -0.2
COL5A3-201ENST00000264828 PLA2G5P39877 138 aa13.79□□□□□ -0.2
COL5A3-201ENST00000264828 SPAG11BQ08648 103 aa13.79□□□□□ -0.2
COL5A3-201ENST00000264828 NCKAP5O14513 1909 aa13.79□□□□□ -0.2
COL5A3-201ENST00000264828 HIGD2BQ4VC39 106 aa13.78□□□□□ -0.2
COL5A3-201ENST00000264828 CTRLP40313 264 aa13.78□□□□□ -0.2
COL5A3-201ENST00000264828 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
COL5A3-201ENST00000264828 ADORA2A-AS1P86434 159 aa13.78□□□□□ -0.2
COL5A3-201ENST00000264828 DEFB135Q30KP9 77 aa13.78□□□□□ -0.2
COL5A3-201ENST00000264828 TRBV12-3P01733 135 aa13.78□□□□□ -0.2
COL5A3-201ENST00000264828 KLK12Q9UKR0 248 aa13.77□□□□□ -0.2
COL5A3-201ENST00000264828 JMJD7-PLA2G4BH0Y9G9 81 aa13.77□□□□□ -0.2
COL5A3-201ENST00000264828 LOXL1Q08397 574 aaPredicted RBP13.77□□□□□ -0.21
COL5A3-201ENST00000264828 ODF3L1Q8IXM7 274 aa13.77□□□□□ -0.21
COL5A3-201ENST00000264828 DYSFO75923 2080 aa13.77□□□□□ -0.21
COL5A3-201ENST00000264828 IGHV1-58A0A0C4DH39 117 aa13.77□□□□□ -0.21
COL5A3-201ENST00000264828 ZFP36P26651 326 aaKnown RBP13.77□□□□□ -0.21
COL5A3-201ENST00000264828 H0Y9J4 135 aa13.76□□□□□ -0.21
COL5A3-201ENST00000264828 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
COL5A3-201ENST00000264828 TCL1BO95988 128 aa13.76□□□□□ -0.21
COL5A3-201ENST00000264828 BRK1Q8WUW1 75 aa13.76□□□□□ -0.21
COL5A3-201ENST00000264828 COL4A4P53420 1690 aaPredicted RBP13.76□□□□□ -0.21
COL5A3-201ENST00000264828 NOTCH4Q99466 2003 aa13.75□□□□□ -0.21
COL5A3-201ENST00000264828 P0DMU3 169 aa13.75□□□□□ -0.21
COL5A3-201ENST00000264828 FAM231AP0DMU4 169 aa13.75□□□□□ -0.21
COL5A3-201ENST00000264828 FAM231CP0DMU5 169 aa13.75□□□□□ -0.21
COL5A3-201ENST00000264828 PKIGQ9Y2B9 76 aa13.75□□□□□ -0.21
COL5A3-201ENST00000264828 UNQ9165/PRO28630Q6UXU0 137 aa13.75□□□□□ -0.21
COL5A3-201ENST00000264828 Q6ZUT4 128 aa13.75□□□□□ -0.21
COL5A3-201ENST00000264828 Q8N7P7 452 aa13.75□□□□□ -0.21
COL5A3-201ENST00000264828 A0A1W2PNU3 283 aaPredicted RBP13.74□□□□□ -0.21
COL5A3-201ENST00000264828 NDUFA11Q86Y39 141 aa13.74□□□□□ -0.21
COL5A3-201ENST00000264828 TRAV23DV6A0A075B6W5 121 aa13.74□□□□□ -0.21
COL5A3-201ENST00000264828 SPTBN2O15020 2390 aa13.74□□□□□ -0.21
COL5A3-201ENST00000264828 TRAV26-1A0A087WT03 109 aa13.74□□□□□ -0.21
COL5A3-201ENST00000264828 H3BQ85 93 aa13.74□□□□□ -0.21
COL5A3-201ENST00000264828 CNOT1A5YKK6 2376 aaKnown RBP13.74□□□□□ -0.21
COL5A3-201ENST00000264828 RNF138Q8WVD3 245 aa13.73□□□□□ -0.21
COL5A3-201ENST00000264828 FAM110AQ9BQ89 295 aa13.73□□□□□ -0.21
COL5A3-201ENST00000264828 TM2D2Q9BX73 214 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms