RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 LY96Q9Y6Y9 160 aa12.29□□□□□ -0.44
SHANK3-201ENST00000262795 C10orf91Q5T1B1 145 aa12.28□□□□□ -0.44
SHANK3-201ENST00000262795 Q8N8P6 123 aa12.28□□□□□ -0.44
SHANK3-201ENST00000262795 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
SHANK3-201ENST00000262795 Q0VG73 95 aa12.28□□□□□ -0.44
SHANK3-201ENST00000262795 FOXI1Q12951 378 aa12.28□□□□□ -0.44
SHANK3-201ENST00000262795 IGLC1P0CG04 106 aa12.27□□□□□ -0.44
SHANK3-201ENST00000262795 J3KT08 172 aa12.27□□□□□ -0.44
SHANK3-201ENST00000262795 NTN5Q8WTR8 489 aaPredicted RBP12.27□□□□□ -0.44
SHANK3-201ENST00000262795 TDRG1Q3Y452 100 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 MED13Q9UHV7 2174 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 A0A1B0GX51 115 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 HIGD2AQ9BW72 106 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 OTOGLQ3ZCN5 2332 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 TNCP24821 2201 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 NDUFA1O15239 70 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 GPR179Q6PRD1 2367 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 ZNF491Q8N8L2 437 aa12.27□□□□□ -0.45
SHANK3-201ENST00000262795 SH2D6Q7Z4S9 175 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 C2orf16Q68DN1 1984 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 Q8N9W7 124 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 NUP210Q8TEM1 1887 aaPredicted RBP12.26□□□□□ -0.45
SHANK3-201ENST00000262795 SLC25A29Q8N8R3 303 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 KAAG1Q9UBP8 84 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 SPTAN1Q13813 2472 aaKnown RBP12.26□□□□□ -0.45
SHANK3-201ENST00000262795 PRR20EP86478 221 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 PRR20CP86479 221 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 PRR20DP86480 221 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 PRR20BP86481 221 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 PRR20AP86496 221 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 FAM104BQ5XKR9 115 aa12.26□□□□□ -0.45
SHANK3-201ENST00000262795 ARHGAP21Q5T5U3 1957 aa12.25□□□□□ -0.45
SHANK3-201ENST00000262795 NDUFB1O75438 58 aa12.25□□□□□ -0.45
SHANK3-201ENST00000262795 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
SHANK3-201ENST00000262795 RNASE8Q8TDE3 154 aaKnown RBP12.25□□□□□ -0.45
SHANK3-201ENST00000262795 C7orf33Q8WU49 177 aa12.25□□□□□ -0.45
SHANK3-201ENST00000262795 TRAV13-2A0A0B4J235 113 aa12.25□□□□□ -0.45
SHANK3-201ENST00000262795 IGFL2Q6UWQ7 119 aa12.25□□□□□ -0.45
SHANK3-201ENST00000262795 Q8N1Y9 231 aa12.25□□□□□ -0.45
SHANK3-201ENST00000262795 OXLD1Q5BKU9 147 aa12.24□□□□□ -0.45
SHANK3-201ENST00000262795 CT83Q5H943 113 aa12.24□□□□□ -0.45
SHANK3-201ENST00000262795 AGPAT4-IT1Q9H0P7 198 aa12.24□□□□□ -0.45
SHANK3-201ENST00000262795 LOXL1Q08397 574 aaPredicted RBP12.24□□□□□ -0.45
SHANK3-201ENST00000262795 COX8AP10176 69 aa12.24□□□□□ -0.45
SHANK3-201ENST00000262795 RETNQ9HD89 108 aa12.24□□□□□ -0.45
SHANK3-201ENST00000262795 FAM236AA0A1B0GUQ0 79 aa12.24□□□□□ -0.45
SHANK3-201ENST00000262795 FAM236BA0A1B0GV22 79 aa12.24□□□□□ -0.45
SHANK3-201ENST00000262795 DKK2Q9UBU2 259 aa12.24□□□□□ -0.45
SHANK3-201ENST00000262795 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
SHANK3-201ENST00000262795 INSL3P51460 131 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 DAND5Q8N907 189 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 V9GYY9 64 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 FAM222AQ5U5X8 452 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 FNDC10F2Z333 226 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 GFRA4Q9GZZ7 299 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 V9GYV3 84 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 LYPD6Q86Y78 171 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 MUSTN1Q8IVN3 82 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 COL4A3Q01955 1670 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 PLXNA2O75051 1894 aa12.23□□□□□ -0.45
SHANK3-201ENST00000262795 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
SHANK3-201ENST00000262795 NPYP01303 97 aa12.22□□□□□ -0.45
SHANK3-201ENST00000262795 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
SHANK3-201ENST00000262795 K7EN84 100 aa12.22□□□□□ -0.45
SHANK3-201ENST00000262795 DAZ2Q13117 558 aaKnown RBP12.22□□□□□ -0.45
SHANK3-201ENST00000262795 FAM19A5Q7Z5A7 132 aaPredicted RBP12.22□□□□□ -0.45
SHANK3-201ENST00000262795 DAZ4Q86SG3 579 aaKnown RBP12.22□□□□□ -0.45
SHANK3-201ENST00000262795 DAZ3Q9NR90 486 aaKnown RBP12.22□□□□□ -0.45
SHANK3-201ENST00000262795 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
SHANK3-201ENST00000262795 Q8N7P7 452 aa12.21□□□□□ -0.45
SHANK3-201ENST00000262795 SMIM27A0A1W2PRY6 76 aa12.21□□□□□ -0.45
SHANK3-201ENST00000262795 IGLC7A0M8Q6 106 aa12.21□□□□□ -0.45
SHANK3-201ENST00000262795 NUPR1O60356 82 aa12.21□□□□□ -0.45
SHANK3-201ENST00000262795 TMEM190Q8WZ59 177 aa12.21□□□□□ -0.45
SHANK3-201ENST00000262795 BAALC-AS2P0C853 105 aa12.2□□□□□ -0.46
SHANK3-201ENST00000262795 C14orf177Q52M58 125 aa12.2□□□□□ -0.46
SHANK3-201ENST00000262795 FUSP35637 526 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■■■□□ 15.1
SHANK3-201ENST00000262795 MAP6D1Q9H9H5 199 aa12.2□□□□□ -0.46
SHANK3-201ENST00000262795 UBE2D3P61077 147 aa12.2□□□□□ -0.46
SHANK3-201ENST00000262795 HERV-K104P63124 156 aa12.2□□□□□ -0.46
SHANK3-201ENST00000262795 C9orf85Q96MD7 179 aa12.2□□□□□ -0.46
SHANK3-201ENST00000262795 LTAP01374 205 aa12.19□□□□□ -0.46
SHANK3-201ENST00000262795 FXYD5Q96DB9 178 aa12.19□□□□□ -0.46
SHANK3-201ENST00000262795 FAM19A1Q7Z5A9 133 aa12.19□□□□□ -0.46
SHANK3-201ENST00000262795 LRRC75A-AS1Q8N1F1 130 aa12.19□□□□□ -0.46
SHANK3-201ENST00000262795 PSMB8P28062 276 aa12.19□□□□□ -0.46
SHANK3-201ENST00000262795 UNQ9165/PRO28630Q6UXU0 137 aa12.19□□□□□ -0.46
SHANK3-201ENST00000262795 ZNF492Q9P255 531 aa12.19□□□□□ -0.46
SHANK3-201ENST00000262795 PRO1854Q9UHT4 67 aa12.19□□□□□ -0.46
SHANK3-201ENST00000262795 IGKV1D-37A0A075B6S9 117 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 SEC61GP60059 68 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 FAM231DQ6ZW35 169 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 LINC00269Q8N2A0 174 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 MRPL35Q9NZE8 188 aaKnown RBP12.18□□□□□ -0.46
SHANK3-201ENST00000262795 TNRC6BQ9UPQ9 1833 aaKnown RBP12.18□□□□□ -0.46
SHANK3-201ENST00000262795 PLA2G2EQ9NZK7 142 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 Q6YL49 198 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 ZNF493Q6ZR52 646 aa12.18□□□□□ -0.46
SHANK3-201ENST00000262795 PCP2Q8IVA1 136 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms