RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 CNFNQ9BYD5 112 aa15.25■□□□□ 0.03
CCNE1-201ENST00000262643 BAGE3Q86Y29 109 aa15.24■□□□□ 0.03
CCNE1-201ENST00000262643 GATD1Q8NB37 220 aa15.24■□□□□ 0.03
CCNE1-201ENST00000262643 FABP4P15090 132 aa15.24■□□□□ 0.03
CCNE1-201ENST00000262643 Q6ZTC4 211 aa15.24■□□□□ 0.03
CCNE1-201ENST00000262643 OR5AL1P0C617 328 aa15.23■□□□□ 0.03
CCNE1-201ENST00000262643 S100A4P26447 101 aaKnown RBP15.23■□□□□ 0.03
CCNE1-201ENST00000262643 ASIPP42127 132 aa15.23■□□□□ 0.03
CCNE1-201ENST00000262643 OR10J3Q5JRS4 329 aa15.23■□□□□ 0.03
CCNE1-201ENST00000262643 ZNF493Q6ZR52 646 aa15.23■□□□□ 0.03
CCNE1-201ENST00000262643 HIST1H2BLQ99880 126 aa15.23■□□□□ 0.03
CCNE1-201ENST00000262643 SNAI2O43623 268 aa15.22■□□□□ 0.03
CCNE1-201ENST00000262643 NUPR1O60356 82 aa15.22■□□□□ 0.03
CCNE1-201ENST00000262643 RRN3P1Q2M238 152 aa15.22■□□□□ 0.03
CCNE1-201ENST00000262643 ALKBH7Q9BT30 221 aaPredicted RBP15.22■□□□□ 0.03
CCNE1-201ENST00000262643 HYDINQ4G0P3 5121 aa15.22■□□□□ 0.03
CCNE1-201ENST00000262643 PRM2P04554 102 aa15.22■□□□□ 0.03
CCNE1-201ENST00000262643 ALMS1Q8TCU4 4167 aa15.22■□□□□ 0.03
CCNE1-201ENST00000262643 SERF1AO75920 110 aa15.21■□□□□ 0.03
CCNE1-201ENST00000262643 RNASE3P12724 160 aaKnown RBP15.21■□□□□ 0.03
CCNE1-201ENST00000262643 LINC00310P59036 64 aa15.21■□□□□ 0.03
CCNE1-201ENST00000262643 C12orf74Q32Q52 190 aa15.21■□□□□ 0.02
CCNE1-201ENST00000262643 AMN1Q8IY45 258 aa15.21■□□□□ 0.02
CCNE1-201ENST00000262643 C18orf32Q8TCD1 76 aa15.21■□□□□ 0.02
CCNE1-201ENST00000262643 IQCJQ1A5X6 159 aa15.2■□□□□ 0.02
CCNE1-201ENST00000262643 SPANXN1Q5VSR9 72 aa15.2■□□□□ 0.02
CCNE1-201ENST00000262643 OR10D4PQ8NGN7 298 aa15.2■□□□□ 0.02
CCNE1-201ENST00000262643 KCNS1Q96KK3 526 aa15.2■□□□□ 0.02
CCNE1-201ENST00000262643 SPART-AS1P0CW21 52 aa15.19■□□□□ 0.02
CCNE1-201ENST00000262643 TDRG1Q3Y452 100 aa15.19■□□□□ 0.02
CCNE1-201ENST00000262643 FAM104BQ5XKR9 115 aa15.19■□□□□ 0.02
CCNE1-201ENST00000262643 LINC00518Q8N0U6 118 aa15.19■□□□□ 0.02
CCNE1-201ENST00000262643 PACRGQ96M98 296 aaPredicted RBP15.19■□□□□ 0.02
CCNE1-201ENST00000262643 LINC01587Q99440 93 aa15.19■□□□□ 0.02
CCNE1-201ENST00000262643 IGHV1OR15-1A0A075B7D0 117 aa15.18■□□□□ 0.02
CCNE1-201ENST00000262643 LY6G6CO95867 125 aa15.18■□□□□ 0.02
CCNE1-201ENST00000262643 HTN1P15515 57 aa15.18■□□□□ 0.02
CCNE1-201ENST00000262643 DNLZQ5SXM8 178 aa15.18■□□□□ 0.02
CCNE1-201ENST00000262643 FAM222AQ5U5X8 452 aa15.18■□□□□ 0.02
CCNE1-201ENST00000262643 LINC00476Q8WZB0 136 aa15.18■□□□□ 0.02
CCNE1-201ENST00000262643 TMEM191AQ9H0A3 160 aa15.18■□□□□ 0.02
CCNE1-201ENST00000262643 SCRT2Q9NQ03 307 aa15.18■□□□□ 0.02
CCNE1-201ENST00000262643 IGHV4-4A0A075B6R2 117 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 IGLL5B9A064 214 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 TMEM18Q96B42 140 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 DKK2Q9UBU2 259 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 PHLDA3Q9Y5J5 127 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 TRAV10A0A0B4J240 114 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 M0R381 172 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 EVI2AP22794 236 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 MDFICQ9P1T7 246 aa15.17■□□□□ 0.02
CCNE1-201ENST00000262643 ESDP10768 282 aa15.16■□□□□ 0.02
CCNE1-201ENST00000262643 CACNG7P62955 275 aa15.16■□□□□ 0.02
CCNE1-201ENST00000262643 MED14OSP0DP75 135 aa15.16■□□□□ 0.02
CCNE1-201ENST00000262643 AZU1P20160 251 aa15.16■□□□□ 0.02
CCNE1-201ENST00000262643 MRPL51Q4U2R6 128 aaKnown RBP15.16■□□□□ 0.02
CCNE1-201ENST00000262643 DEFB131BA0A096LNP1 70 aa15.15■□□□□ 0.02
CCNE1-201ENST00000262643 IGHV3-16A0A0C4DH30 117 aa15.15■□□□□ 0.02
CCNE1-201ENST00000262643 DMRTA1Q5VZB9 504 aa15.15■□□□□ 0.02
CCNE1-201ENST00000262643 RNF185Q96GF1 192 aa15.15■□□□□ 0.02
CCNE1-201ENST00000262643 RAB4AP20338 218 aa15.14■□□□□ 0.01
CCNE1-201ENST00000262643 C12orf57Q99622 126 aa15.14■□□□□ 0.01
CCNE1-201ENST00000262643 SMIM6P0DI80 62 aa15.14■□□□□ 0.01
CCNE1-201ENST00000262643 TEX48A0A1B0GUV7 120 aa15.13■□□□□ 0.01
CCNE1-201ENST00000262643 D6R8Y8 96 aa15.13■□□□□ 0.01
CCNE1-201ENST00000262643 CBY3A6NI87 242 aa15.12■□□□□ 0.01
CCNE1-201ENST00000262643 SMKR1H3BMG3 65 aa15.12■□□□□ 0.01
CCNE1-201ENST00000262643 SAMD10Q9BYL1 202 aa15.12■□□□□ 0.01
CCNE1-201ENST00000262643 SMIM15Q7Z3B0 74 aa15.11■□□□□ 0.01
CCNE1-201ENST00000262643 C9orf85Q96MD7 179 aa15.11■□□□□ 0.01
CCNE1-201ENST00000262643 C20orf144Q9BQM9 153 aa15.11■□□□□ 0.01
CCNE1-201ENST00000262643 GAS8-AS1O95177 125 aa15.1■□□□□ 0.01
CCNE1-201ENST00000262643 NCR2O95944 276 aa15.1■□□□□ 0.01
CCNE1-201ENST00000262643 CKS2P33552 79 aa15.1■□□□□ 0.01
CCNE1-201ENST00000262643 DAD1P61803 113 aa15.1■□□□□ 0.01
CCNE1-201ENST00000262643 PYY3Q5JQD4 70 aa15.1■□□□□ 0.01
CCNE1-201ENST00000262643 RNASEKQ6P5S7 137 aaKnown RBP15.1■□□□□ 0.01
CCNE1-201ENST00000262643 APLNQ9ULZ1 77 aa15.1■□□□□ 0.01
CCNE1-201ENST00000262643 PLAC8L1A1L4L8 177 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 HTN3P15516 51 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 NIT1Q86X76 327 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 ORMDL3Q8N138 153 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 C14orf178Q8N769 122 aaPredicted RBP15.09■□□□□ 0.01
CCNE1-201ENST00000262643 PRELID3AQ96N28 172 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 TRGV11A0A075B6L2 103 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 PMCHP20382 165 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 TCTAP57738 103 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 C16orf74Q96GX8 76 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 URB1-AS1Q96HZ7 61 aa15.09■□□□□ 0.01
CCNE1-201ENST00000262643 MUC4Q99102 2169 aa15.08■□□□□ 0
CCNE1-201ENST00000262643 NXPH4O95158 308 aa15.08■□□□□ 0
CCNE1-201ENST00000262643 DEFB130BP0DP73 79 aa15.08■□□□□ 0
CCNE1-201ENST00000262643 DEFB130AP0DP74 79 aa15.08■□□□□ 0
CCNE1-201ENST00000262643 AMTP48728 403 aa15.08■□□□□ 0
CCNE1-201ENST00000262643 JPT2Q9H910 190 aa15.08■□□□□ 0
CCNE1-201ENST00000262643 RNASE8Q8TDE3 154 aaKnown RBP15.07■□□□□ 0
CCNE1-201ENST00000262643 TMEM263Q8WUH6 116 aaKnown RBP15.07■□□□□ 0
CCNE1-201ENST00000262643 LYRM9A8MSI8 78 aa15.07■□□□□ 0
CCNE1-201ENST00000262643 HSBP1O75506 76 aa15.07■□□□□ 0
CCNE1-201ENST00000262643 GATA1P15976 413 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms