RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 BEAN1Q3B7T3 259 aa16.41■□□□□ 0.22
SIX3-201ENST00000260653 TRPT1Q86TN4 253 aaKnown RBP16.4■□□□□ 0.22
SIX3-201ENST00000260653 NXPH4O95158 308 aa16.4■□□□□ 0.22
SIX3-201ENST00000260653 HTN1P15515 57 aa16.4■□□□□ 0.22
SIX3-201ENST00000260653 PMCHL1Q16048 86 aa16.4■□□□□ 0.22
SIX3-201ENST00000260653 C9orf85Q96MD7 179 aa16.4■□□□□ 0.22
SIX3-201ENST00000260653 TRAV26-2A0A0B4J265 109 aa16.39■□□□□ 0.21
SIX3-201ENST00000260653 LOC389332A0A1B0GUA5 103 aa16.39■□□□□ 0.21
SIX3-201ENST00000260653 GATA1P15976 413 aaPredicted RBP16.39■□□□□ 0.21
SIX3-201ENST00000260653 JOSD1Q15040 202 aaPredicted RBP16.39■□□□□ 0.21
SIX3-201ENST00000260653 C14orf178Q8N769 122 aaPredicted RBP16.39■□□□□ 0.21
SIX3-201ENST00000260653 CHCHD1Q96BP2 118 aaKnown RBP16.39■□□□□ 0.21
SIX3-201ENST00000260653 C19orf73Q9NVV2 129 aa16.39■□□□□ 0.21
SIX3-201ENST00000260653 TRRAPQ9Y4A5 3859 aa16.38■□□□□ 0.21
SIX3-201ENST00000260653 CCL25O15444 150 aa16.38■□□□□ 0.21
SIX3-201ENST00000260653 PRM2P04554 102 aa16.38■□□□□ 0.21
SIX3-201ENST00000260653 IFI27P40305 119 aaPredicted RBP16.38■□□□□ 0.21
SIX3-201ENST00000260653 MRPL52Q86TS9 123 aaKnown RBP16.38■□□□□ 0.21
SIX3-201ENST00000260653 XCL2Q9UBD3 114 aa16.38■□□□□ 0.21
SIX3-201ENST00000260653 PRSS3P2Q8NHM4 247 aa16.37■□□□□ 0.21
SIX3-201ENST00000260653 AP1S3Q96PC3 154 aa16.37■□□□□ 0.21
SIX3-201ENST00000260653 INSP01308 110 aa16.36■□□□□ 0.21
SIX3-201ENST00000260653 CMC4P56277 68 aaPredicted RBP16.36■□□□□ 0.21
SIX3-201ENST00000260653 FAM110AQ9BQ89 295 aa16.36■□□□□ 0.21
SIX3-201ENST00000260653 DPH3P1Q9H4G8 78 aa16.36■□□□□ 0.21
SIX3-201ENST00000260653 TRGV11A0A075B6L2 103 aa16.36■□□□□ 0.21
SIX3-201ENST00000260653 IGHV1-24A0A0C4DH33 117 aa16.36■□□□□ 0.21
SIX3-201ENST00000260653 JPT2Q9H910 190 aa16.36■□□□□ 0.21
SIX3-201ENST00000260653 TNFRSF6BO95407 300 aa16.35■□□□□ 0.21
SIX3-201ENST00000260653 MAST4O15021 2626 aa16.35■□□□□ 0.21
SIX3-201ENST00000260653 KRTAP24-1Q3LI83 254 aa16.35■□□□□ 0.21
SIX3-201ENST00000260653 AP5S1Q9NUS5 200 aa16.35■□□□□ 0.21
SIX3-201ENST00000260653 FA2HQ7L5A8 372 aa16.34■□□□□ 0.21
SIX3-201ENST00000260653 LINC01587Q99440 93 aa16.34■□□□□ 0.21
SIX3-201ENST00000260653 MGPP08493 103 aa16.33■□□□□ 0.2
SIX3-201ENST00000260653 LAMTOR2Q9Y2Q5 125 aa16.33■□□□□ 0.2
SIX3-201ENST00000260653 KRTDAPP60985 99 aa16.32■□□□□ 0.2
SIX3-201ENST00000260653 NRACQ8N912 160 aa16.32■□□□□ 0.2
SIX3-201ENST00000260653 FBN1P35555 2871 aaKnown RBP16.32■□□□□ 0.2
SIX3-201ENST00000260653 C20orf144Q9BQM9 153 aa16.32■□□□□ 0.2
SIX3-201ENST00000260653 MAP1LC3AQ9H492 121 aa16.32■□□□□ 0.2
SIX3-201ENST00000260653 KIF25-AS1Q9Y6Z4 181 aa16.32■□□□□ 0.2
SIX3-201ENST00000260653 SCGB1D1O95968 90 aa16.31■□□□□ 0.2
SIX3-201ENST00000260653 C9orf66Q5T8R8 295 aa16.31■□□□□ 0.2
SIX3-201ENST00000260653 MRAP2Q96G30 205 aa16.31■□□□□ 0.2
SIX3-201ENST00000260653 A0A087WWL8 130 aa16.3■□□□□ 0.2
SIX3-201ENST00000260653 INSL3P51460 131 aa16.3■□□□□ 0.2
SIX3-201ENST00000260653 RPL35AP18077 110 aaKnown RBP16.3■□□□□ 0.2
SIX3-201ENST00000260653 LINC00315P59091 139 aa16.3■□□□□ 0.2
SIX3-201ENST00000260653 SYT8Q8NBV8 401 aa16.3■□□□□ 0.2
SIX3-201ENST00000260653 C1orf158Q8N1D5 194 aa16.29■□□□□ 0.2
SIX3-201ENST00000260653 SMIM17P0DL12 118 aa16.29■□□□□ 0.2
SIX3-201ENST00000260653 ZNF876PQ49A33 203 aa16.29■□□□□ 0.2
SIX3-201ENST00000260653 IGHV3OR16-12A0A075B7B8 117 aa16.28■□□□□ 0.2
SIX3-201ENST00000260653 GIG44P09565 113 aaPredicted RBP16.28■□□□□ 0.2
SIX3-201ENST00000260653 C3orf79P0CE67 100 aa16.28■□□□□ 0.2
SIX3-201ENST00000260653 DEFB125Q8N687 156 aa16.28■□□□□ 0.2
SIX3-201ENST00000260653 LINC00467Q9BRT7 94 aa16.28■□□□□ 0.2
SIX3-201ENST00000260653 STAB1Q9NY15 2570 aa16.28■□□□□ 0.2
SIX3-201ENST00000260653 LINC00173Q6ZV60 143 aa16.27■□□□□ 0.2
SIX3-201ENST00000260653 FAM74A4Q5TZK3 123 aa16.27■□□□□ 0.2
SIX3-201ENST00000260653 RASL10AQ92737 203 aa16.27■□□□□ 0.2
SIX3-201ENST00000260653 C11orf72Q8NBR9 251 aa16.26■□□□□ 0.19
SIX3-201ENST00000260653 RPL39LQ96EH5 51 aaKnown RBP16.26■□□□□ 0.19
SIX3-201ENST00000260653 A0A096LNJ9 63 aa16.26■□□□□ 0.19
SIX3-201ENST00000260653 ZNF415Q09FC8 603 aa16.26■□□□□ 0.19
SIX3-201ENST00000260653 POM121L12Q8N7R1 296 aa16.26■□□□□ 0.19
SIX3-201ENST00000260653 LEPROTL1O95214 131 aa16.25■□□□□ 0.19
SIX3-201ENST00000260653 AZU1P20160 251 aa16.25■□□□□ 0.19
SIX3-201ENST00000260653 PRIMA1Q86XR5 153 aa16.25■□□□□ 0.19
SIX3-201ENST00000260653 NXT2Q9NPJ8 142 aaKnown RBP16.25■□□□□ 0.19
SIX3-201ENST00000260653 Q8N976 141 aa16.24■□□□□ 0.19
SIX3-201ENST00000260653 IGLV2-18A0A075B6J9 118 aa16.24■□□□□ 0.19
SIX3-201ENST00000260653 CRYGDP07320 174 aa16.24■□□□□ 0.19
SIX3-201ENST00000260653 GTSCR1Q86UQ5 136 aa16.24■□□□□ 0.19
SIX3-201ENST00000260653 SPXQ9BT56 116 aa16.23■□□□□ 0.19
SIX3-201ENST00000260653 SUMO4Q6EEV6 95 aa16.23■□□□□ 0.19
SIX3-201ENST00000260653 F5H697 171 aa16.22■□□□□ 0.19
SIX3-201ENST00000260653 UBE2V1Q13404 147 aa16.22■□□□□ 0.19
SIX3-201ENST00000260653 COL5A1-AS1Q5SY13 56 aa16.22■□□□□ 0.19
SIX3-201ENST00000260653 Q8N8P6 123 aa16.22■□□□□ 0.19
SIX3-201ENST00000260653 A0A1B0GV72 72 aa16.22■□□□□ 0.19
SIX3-201ENST00000260653 M0R2P5 195 aa16.22■□□□□ 0.19
SIX3-201ENST00000260653 IGLL1P15814 213 aa16.22■□□□□ 0.19
SIX3-201ENST00000260653 ORAOV1Q8WV07 137 aa16.22■□□□□ 0.19
SIX3-201ENST00000260653 LINC01546A6NGU7 62 aa16.21■□□□□ 0.19
SIX3-201ENST00000260653 OCIAD2Q56VL3 154 aa16.21■□□□□ 0.19
SIX3-201ENST00000260653 WFDC9Q8NEX5 89 aa16.21■□□□□ 0.19
SIX3-201ENST00000260653 SUMO2P61956 95 aaKnown RBP16.2■□□□□ 0.18
SIX3-201ENST00000260653 ZNF56Q15929 161 aa16.2■□□□□ 0.18
SIX3-201ENST00000260653 MCRIP2Q9BUT9 160 aaKnown RBP16.2■□□□□ 0.18
SIX3-201ENST00000260653 ZNF747Q9BV97 191 aa16.2■□□□□ 0.18
SIX3-201ENST00000260653 SMIM2Q9BVW6 85 aa16.2■□□□□ 0.18
SIX3-201ENST00000260653 ZNF705AQ6ZN79 300 aaPredicted RBP16.19■□□□□ 0.18
SIX3-201ENST00000260653 SPATA12Q7Z6I5 190 aa16.19■□□□□ 0.18
SIX3-201ENST00000260653 NACAE9PAV3 2078 aa16.19■□□□□ 0.18
SIX3-201ENST00000260653 HBDP02042 147 aa16.19■□□□□ 0.18
SIX3-201ENST00000260653 MORN3Q6PF18 240 aaPredicted RBP16.19■□□□□ 0.18
SIX3-201ENST00000260653 CSNK1G2-AS1Q8NCQ2 148 aa16.19■□□□□ 0.18
SIX3-201ENST00000260653 TMEM70Q9BUB7 260 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms