RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 USMG5Q96IX5 58 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 ABCA12Q86UK0 2595 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 IGHV7-4-1A0A0J9YVY3 117 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 ADARB2-AS1A8MUL3 147 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 TMEM238C9JI98 176 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 G3V4G9 280 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 IGHV4-39P01824 125 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 RRN3P1Q2M238 152 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 RNASE13Q5GAN3 156 aaKnown RBP3.61□□□□□ -1.83
USP44-201ENST00000258499 PAPPA-AS1Q5QFB9 102 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 FOXI2Q6ZQN5 318 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 C11orf44Q8N8P7 122 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 DYNLRB2Q8TF09 96 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 RASL10AQ92737 203 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 HIGD1BQ9P298 99 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 RELNP78509 3460 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 GAGE12HA6NDE8 117 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 CD28P10747 220 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 EBI3Q14213 229 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 C11orf71Q6IPW1 123 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 NRACQ8N912 160 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 BAALCQ8WXS3 180 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 DUX3Q96PT4 197 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 C20orf78Q9BR46 151 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 SPXQ9BT56 116 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 TNFRSF18Q9Y5U5 241 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 F8W1H4 67 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 PMVKQ15126 192 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 NRGNQ92686 78 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 MRPL53Q96EL3 112 aaKnown RBP3.6□□□□□ -1.83
USP44-201ENST00000258499 OPRPNQ99935 248 aaPredicted RBP3.6□□□□□ -1.83
USP44-201ENST00000258499 GEMIN7Q9H840 131 aaKnown RBP3.6□□□□□ -1.83
USP44-201ENST00000258499 ASH1LQ9NR48 2969 aaKnown RBP3.6□□□□□ -1.83
USP44-201ENST00000258499 COL12A1Q99715 3063 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 C11orf86A6NJI1 115 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 ZFAND2AQ8N6M9 145 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 ITLN2Q8WWU7 325 aaPredicted RBP3.6□□□□□ -1.83
USP44-201ENST00000258499 A8MWV9 139 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 C19orf84I3L1E1 186 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 MSMBP08118 114 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 LGALS1P09382 135 aaKnown RBP3.6□□□□□ -1.83
USP44-201ENST00000258499 SUMO4Q6EEV6 95 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 UFSP1Q6NVU6 142 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 Q6ZS46 218 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 PTH2Q96A98 100 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 CNFNQ9BYD5 112 aa3.6□□□□□ -1.83
USP44-201ENST00000258499 MTORP42345 2549 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 IGHV4-30-2A0A087WSY4 118 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 IGKV3OR2-268A0A0C4DH90 116 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 A0A1B0GV72 72 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 IGHV4-59P01825 116 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 TAL2Q16559 108 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 PHLDA1Q8WV24 401 aaPredicted RBP3.59□□□□□ -1.83
USP44-201ENST00000258499 PLEKHB2Q96CS7 222 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 LENEPQ9Y5L5 61 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 COL27A1Q8IZC6 1860 aaPredicted RBP3.59□□□□□ -1.83
USP44-201ENST00000258499 C9JAW5 83 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 J3QQQ9 107 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 SRSF2Q01130 221 aaKnown RBP3.59□□□□□ -1.83
USP44-201ENST00000258499 ZFP2Q6ZN57 461 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 TOMM6Q96B49 74 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 LINC01587Q99440 93 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 TM2D2Q9BX73 214 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 MDFICQ9P1T7 246 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 ERG28Q9UKR5 140 aa3.59□□□□□ -1.83
USP44-201ENST00000258499 HIVEP2P31629 2446 aa3.59□□□□□ -1.84
USP44-201ENST00000258499 IGHV3-16A0A0C4DH30 117 aa3.59□□□□□ -1.84
USP44-201ENST00000258499 EDN2P20800 178 aa3.59□□□□□ -1.84
USP44-201ENST00000258499 DEFB131AP59861 70 aa3.59□□□□□ -1.84
USP44-201ENST00000258499 PKD1L2Q7Z442 2459 aa3.59□□□□□ -1.84
USP44-201ENST00000258499 FN1P02751 2386 aaKnown RBP3.58□□□□□ -1.84
USP44-201ENST00000258499 IGHV3-38A0A0C4DH36 116 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 A0A1W2PRX2 142 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 B4DSR2 109 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 E9PLD3 99 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 DEFB136Q30KP8 78 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 C10orf99Q6UWK7 81 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 JMJD1CQ15652 2540 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 A0A0J9YXV3 536 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 COX6CP09669 75 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 SPINK8P0C7L1 97 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 INSL3P51460 131 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 Q8N1Y9 231 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 ZNF625Q96I27 306 aaPredicted RBP3.58□□□□□ -1.84
USP44-201ENST00000258499 SPAG8Q99932 426 aaPredicted RBP3.58□□□□□ -1.84
USP44-201ENST00000258499 IGHV1OR15-1A0A075B7D0 117 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 TRAV12-1A0A0B4J245 112 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 NEXN-AS1Q8NBZ9 246 aa3.58□□□□□ -1.84
USP44-201ENST00000258499 RNASE3P12724 160 aaKnown RBP3.57□□□□□ -1.84
USP44-201ENST00000258499 CKS1BP61024 79 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 DEFB112Q30KQ8 113 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 COX8CQ7Z4L0 72 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 IGLV2-18A0A075B6J9 118 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 IGHV3-53P01767 116 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 IGHG2P01859 326 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 TCTEX1D4Q5JR98 221 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 MEIG1Q5JSS6 88 aa3.57□□□□□ -1.84
USP44-201ENST00000258499 TRPT1Q86TN4 253 aaKnown RBP3.57□□□□□ -1.84
USP44-201ENST00000258499 TIMM21Q9BVV7 248 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms