RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
LRP3-201ENST00000253193 ETDBQ3ZM63 59 aa13.91□□□□□ -0.18
LRP3-201ENST00000253193 TOMM6Q96B49 74 aa13.91□□□□□ -0.18
LRP3-201ENST00000253193 PSMG3-AS1Q96PY0 264 aa13.91□□□□□ -0.18
LRP3-201ENST00000253193 PGPEP1Q9NXJ5 209 aa13.91□□□□□ -0.18
LRP3-201ENST00000253193 TMEM238LA0A1B0GVL6 79 aa13.91□□□□□ -0.18
LRP3-201ENST00000253193 A6NJY4 79 aa13.91□□□□□ -0.18
LRP3-201ENST00000253193 IGLL5B9A064 214 aa13.91□□□□□ -0.18
LRP3-201ENST00000253193 A0A1B0GWB2 263 aa13.9□□□□□ -0.18
LRP3-201ENST00000253193 ABCA12Q86UK0 2595 aa13.9□□□□□ -0.18
LRP3-201ENST00000253193 VCYO14598 125 aa13.9□□□□□ -0.18
LRP3-201ENST00000253193 ZNF418Q8TF45 676 aaPredicted RBP13.9□□□□□ -0.18
LRP3-201ENST00000253193 AZU1P20160 251 aa13.89□□□□□ -0.19
LRP3-201ENST00000253193 TSSC4Q9Y5U2 329 aaPredicted RBP13.89□□□□□ -0.19
LRP3-201ENST00000253193 NACAE9PAV3 2078 aa13.89□□□□□ -0.19
LRP3-201ENST00000253193 A6NDX4 124 aa13.89□□□□□ -0.19
LRP3-201ENST00000253193 RNASE3P12724 160 aaKnown RBP13.89□□□□□ -0.19
LRP3-201ENST00000253193 SAMD13Q5VXD3 122 aa13.89□□□□□ -0.19
LRP3-201ENST00000253193 SUMO4Q6EEV6 95 aa13.89□□□□□ -0.19
LRP3-201ENST00000253193 IGHV4-4A0A075B6R2 117 aa13.88□□□□□ -0.19
LRP3-201ENST00000253193 PSMB2P49721 201 aa13.88□□□□□ -0.19
LRP3-201ENST00000253193 DEFB112Q30KQ8 113 aa13.88□□□□□ -0.19
LRP3-201ENST00000253193 GAGE13Q4V321 117 aa13.88□□□□□ -0.19
LRP3-201ENST00000253193 LGALS3P17931 250 aaKnown RBP13.88□□□□□ -0.19
LRP3-201ENST00000253193 INSL3P51460 131 aa13.88□□□□□ -0.19
LRP3-201ENST00000253193 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
LRP3-201ENST00000253193 ZNF876PQ49A33 203 aa13.87□□□□□ -0.19
LRP3-201ENST00000253193 LINC01549A6NIU2 74 aa13.87□□□□□ -0.19
LRP3-201ENST00000253193 AVPP01185 164 aa13.87□□□□□ -0.19
LRP3-201ENST00000253193 TRAV12-1A0A0B4J245 112 aa13.86□□□□□ -0.19
LRP3-201ENST00000253193 NEXN-AS1Q8NBZ9 246 aa13.86□□□□□ -0.19
LRP3-201ENST00000253193 TM2D2Q9BX73 214 aa13.86□□□□□ -0.19
LRP3-201ENST00000253193 NDUFS8O00217 210 aa13.86□□□□□ -0.19
LRP3-201ENST00000253193 Q1RN00 199 aa13.86□□□□□ -0.19
LRP3-201ENST00000253193 H3BUA1 57 aa13.86□□□□□ -0.19
LRP3-201ENST00000253193 ATP6V0BQ99437 205 aa13.86□□□□□ -0.19
LRP3-201ENST00000253193 DOPEY1Q5JWR5 2465 aa13.86□□□□□ -0.19
LRP3-201ENST00000253193 ZFP2Q6ZN57 461 aa13.85□□□□□ -0.19
LRP3-201ENST00000253193 VPS13CQ709C8 3753 aa13.85□□□□□ -0.19
LRP3-201ENST00000253193 C11orf86A6NJI1 115 aa13.85□□□□□ -0.19
LRP3-201ENST00000253193 LGALS1P09382 135 aaKnown RBP13.85□□□□□ -0.19
LRP3-201ENST00000253193 PMVKQ15126 192 aa13.85□□□□□ -0.19
LRP3-201ENST00000253193 FOXI2Q6ZQN5 318 aa13.85□□□□□ -0.19
LRP3-201ENST00000253193 OPRPNQ99935 248 aaPredicted RBP13.84□□□□□ -0.19
LRP3-201ENST00000253193 KNCNA6PVL3 124 aa13.84□□□□□ -0.19
LRP3-201ENST00000253193 E9PLD3 99 aa13.84□□□□□ -0.19
LRP3-201ENST00000253193 TAL2Q16559 108 aa13.84□□□□□ -0.19
LRP3-201ENST00000253193 LINC01546A6NGU7 62 aa13.83□□□□□ -0.19
LRP3-201ENST00000253193 SOCS3O14543 225 aa13.83□□□□□ -0.19
LRP3-201ENST00000253193 Q8N1Y9 231 aa13.83□□□□□ -0.19
LRP3-201ENST00000253193 SPANXB1Q9NS25 103 aaPredicted RBP13.83□□□□□ -0.19
LRP3-201ENST00000253193 ABCA2Q9BZC7 2435 aa13.83□□□□□ -0.2
LRP3-201ENST00000253193 PRSS2P07478 247 aa13.83□□□□□ -0.2
LRP3-201ENST00000253193 PLEKHB2Q96CS7 222 aa13.83□□□□□ -0.2
LRP3-201ENST00000253193 BEX4Q9NWD9 120 aaPredicted RBP13.83□□□□□ -0.2
LRP3-201ENST00000253193 FLNCQ14315 2725 aa13.83□□□□□ -0.2
LRP3-201ENST00000253193 RRN3P1Q2M238 152 aa13.83□□□□□ -0.2
LRP3-201ENST00000253193 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
LRP3-201ENST00000253193 SPAG8Q99932 426 aaPredicted RBP13.82□□□□□ -0.2
LRP3-201ENST00000253193 VCX2Q9H322 139 aa13.82□□□□□ -0.2
LRP3-201ENST00000253193 IGHV3OR16-12A0A075B7B8 117 aa13.81□□□□□ -0.2
LRP3-201ENST00000253193 IGHV1OR15-1A0A075B7D0 117 aa13.81□□□□□ -0.2
LRP3-201ENST00000253193 GAGE12HA6NDE8 117 aa13.81□□□□□ -0.2
LRP3-201ENST00000253193 DEFB136Q30KP8 78 aa13.81□□□□□ -0.2
LRP3-201ENST00000253193 SIGMAR1Q99720 223 aa13.81□□□□□ -0.2
LRP3-201ENST00000253193 TRAV2A0A0B4J234 112 aa13.8□□□□□ -0.2
LRP3-201ENST00000253193 DUX3Q96PT4 197 aa13.8□□□□□ -0.2
LRP3-201ENST00000253193 ZNF462Q96JM2 2506 aa13.8□□□□□ -0.2
LRP3-201ENST00000253193 ANKRD17O75179 2603 aaKnown RBP13.8□□□□□ -0.2
LRP3-201ENST00000253193 PRSS47A8MTI9 375 aa13.79□□□□□ -0.2
LRP3-201ENST00000253193 F8W1H4 67 aa13.79□□□□□ -0.2
LRP3-201ENST00000253193 DEFB131AP59861 70 aa13.79□□□□□ -0.2
LRP3-201ENST00000253193 RNF223E7ERA6 249 aa13.79□□□□□ -0.2
LRP3-201ENST00000253193 PRORYQ9H606 182 aa13.79□□□□□ -0.2
LRP3-201ENST00000253193 RAX2Q96IS3 184 aa13.78□□□□□ -0.2
LRP3-201ENST00000253193 MED14OSP0DP75 135 aa13.78□□□□□ -0.2
LRP3-201ENST00000253193 C19orf54Q5BKX5 351 aa13.78□□□□□ -0.2
LRP3-201ENST00000253193 RNASE13Q5GAN3 156 aaKnown RBP13.78□□□□□ -0.2
LRP3-201ENST00000253193 DYNLRB2Q8TF09 96 aa13.78□□□□□ -0.2
LRP3-201ENST00000253193 TNFRSF18Q9Y5U5 241 aa13.78□□□□□ -0.2
LRP3-201ENST00000253193 C11orf44Q8N8P7 122 aa13.78□□□□□ -0.2
LRP3-201ENST00000253193 IGLV1-40P01703 118 aa13.77□□□□□ -0.2
LRP3-201ENST00000253193 TCTEX1D4Q5JR98 221 aa13.77□□□□□ -0.2
LRP3-201ENST00000253193 DCANP1Q8TF63 244 aa13.77□□□□□ -0.2
LRP3-201ENST00000253193 LINC01356Q8N9X3 169 aa13.77□□□□□ -0.21
LRP3-201ENST00000253193 SPXQ9BT56 116 aa13.77□□□□□ -0.21
LRP3-201ENST00000253193 HOXD3P31249 432 aaPredicted RBP13.77□□□□□ -0.21
LRP3-201ENST00000253193 CRIP2P52943 208 aaPredicted RBP13.77□□□□□ -0.21
LRP3-201ENST00000253193 KLLNB2CW77 178 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 K7EMT4 169 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 LYRM7Q5U5X0 104 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 TMEM141Q96I45 108 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 IGHV4OR15-8A0A075B7B6 117 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 A0A087WW49 117 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 KLK9Q2XQG4 91 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 A0A0J9YX75 114 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 ADARB2-AS1A8MUL3 147 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 CD28P10747 220 aa13.76□□□□□ -0.21
LRP3-201ENST00000253193 DLX4Q92988 240 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms