RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 POM121L12Q8N7R1 296 aa12.89□□□□□ -0.35
LRFN3-201ENST00000246529 LGALS9O00182 355 aa12.89□□□□□ -0.35
LRFN3-201ENST00000246529 COTL1Q14019 142 aa12.89□□□□□ -0.35
LRFN3-201ENST00000246529 TRBV25-1A0A075B6N4 114 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 CDKN1BP46527 198 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 CHAC1Q9BUX1 264 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 CHTOPQ9Y3Y2 248 aaKnown RBP12.88□□□□□ -0.35
LRFN3-201ENST00000246529 NBPF19A0A087WUL8 3843 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 H7C1H1 209 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 GCSHP23434 173 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 NEXN-AS1Q8NBZ9 246 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 RNASE8Q8TDE3 154 aaKnown RBP12.88□□□□□ -0.35
LRFN3-201ENST00000246529 BAALCQ8WXS3 180 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 TLN2Q9Y4G6 2542 aa12.88□□□□□ -0.35
LRFN3-201ENST00000246529 A6NDN8 102 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 KNCNA6PVL3 124 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 F8VRH5 84 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 K7EMI3 77 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 DUSP14O95147 198 aaKnown RBP12.87□□□□□ -0.35
LRFN3-201ENST00000246529 PLNP26678 52 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 C9orf85Q96MD7 179 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 JMJD8Q96S16 334 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 ODF3Q96PU9 254 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 MYO9AB2RTY4 2548 aa12.87□□□□□ -0.35
LRFN3-201ENST00000246529 TRAV12-1A0A0B4J245 112 aa12.86□□□□□ -0.35
LRFN3-201ENST00000246529 FXYD2P54710 66 aa12.86□□□□□ -0.35
LRFN3-201ENST00000246529 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
LRFN3-201ENST00000246529 H3BRM9 83 aa12.86□□□□□ -0.35
LRFN3-201ENST00000246529 H3BUT2 72 aa12.86□□□□□ -0.35
LRFN3-201ENST00000246529 RNF152Q8N8N0 203 aa12.86□□□□□ -0.35
LRFN3-201ENST00000246529 RBMY1A1P0DJD3 496 aaKnown RBP12.85□□□□□ -0.35
LRFN3-201ENST00000246529 RBMY1CP0DJD4 496 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 RBMY1FQ15415 496 aaKnown RBP12.85□□□□□ -0.35
LRFN3-201ENST00000246529 KHDC1LQ5JSQ8 128 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 KRTAP1-3Q8IUG1 177 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 PRSS29PA6NIE9 313 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 PPP1R17O96001 155 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 HTN1P15515 57 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 RPL39P62891 51 aaKnown RBP12.85□□□□□ -0.35
LRFN3-201ENST00000246529 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
LRFN3-201ENST00000246529 C9orf118A6NHY6 69 aa12.84□□□□□ -0.35
LRFN3-201ENST00000246529 PRM2P04554 102 aa12.84□□□□□ -0.35
LRFN3-201ENST00000246529 POLR2KP53803 58 aaKnown RBP12.84□□□□□ -0.35
LRFN3-201ENST00000246529 HIGD1BQ9P298 99 aa12.84□□□□□ -0.35
LRFN3-201ENST00000246529 TP53TG1Q9Y2A0 90 aa12.84□□□□□ -0.35
LRFN3-201ENST00000246529 ZNF56Q15929 161 aa12.84□□□□□ -0.35
LRFN3-201ENST00000246529 ZFP2Q6ZN57 461 aa12.84□□□□□ -0.35
LRFN3-201ENST00000246529 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
LRFN3-201ENST00000246529 OR11H1Q8NG94 326 aa12.84□□□□□ -0.35
LRFN3-201ENST00000246529 SDHAF1A6NFY7 115 aa12.83□□□□□ -0.36
LRFN3-201ENST00000246529 K7ERJ3 54 aa12.83□□□□□ -0.36
LRFN3-201ENST00000246529 TSHBP01222 138 aa12.83□□□□□ -0.36
LRFN3-201ENST00000246529 DEFB131AP59861 70 aa12.83□□□□□ -0.36
LRFN3-201ENST00000246529 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
LRFN3-201ENST00000246529 CRYGDP07320 174 aa12.83□□□□□ -0.36
LRFN3-201ENST00000246529 EMP1P54849 157 aa12.83□□□□□ -0.36
LRFN3-201ENST00000246529 HIST2H2BCQ6DN03 193 aa12.83□□□□□ -0.36
LRFN3-201ENST00000246529 ZNF256Q9Y2P7 627 aaPredicted RBP12.83□□□□□ -0.36
LRFN3-201ENST00000246529 SONP18583 2426 aaKnown RBP12.82□□□□□ -0.36
LRFN3-201ENST00000246529 CYSLTR1Q9Y271 337 aa12.82□□□□□ -0.36
LRFN3-201ENST00000246529 PRRC2AP48634 2157 aaKnown RBP12.81□□□□□ -0.36
LRFN3-201ENST00000246529 CUBNO60494 3623 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 ITPR3Q14573 2671 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 Q8N2B8 174 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 LINC01619G3V211 115 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 VCYO14598 125 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 ZNF876PQ49A33 203 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 TMEM61Q8N0U2 210 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 LRRC75A-AS1Q8N1F1 130 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 SYT8Q8NBV8 401 aa12.81□□□□□ -0.36
LRFN3-201ENST00000246529 AKAP9Q99996 3911 aa12.8□□□□□ -0.36
LRFN3-201ENST00000246529 RBMY1BA6NDE4 496 aaKnown RBP12.8□□□□□ -0.36
LRFN3-201ENST00000246529 RBMY1EA6NEQ0 496 aaKnown RBP12.8□□□□□ -0.36
LRFN3-201ENST00000246529 M0QY20 66 aa12.8□□□□□ -0.36
LRFN3-201ENST00000246529 RBMY1DP0C7P1 496 aaKnown RBP12.8□□□□□ -0.36
LRFN3-201ENST00000246529 GAGE10A6NGK3 116 aa12.8□□□□□ -0.36
LRFN3-201ENST00000246529 IGIPA6NJ69 53 aa12.8□□□□□ -0.36
LRFN3-201ENST00000246529 WFDC11Q8NEX6 87 aa12.8□□□□□ -0.36
LRFN3-201ENST00000246529 DLX4Q92988 240 aaPredicted RBP12.8□□□□□ -0.36
LRFN3-201ENST00000246529 KIR2DL4Q99706 377 aa12.8□□□□□ -0.36
LRFN3-201ENST00000246529 TENM4Q6N022 2769 aa12.8□□□□□ -0.36
LRFN3-201ENST00000246529 RPL32P62910 135 aaKnown RBP12.79□□□□□ -0.36
LRFN3-201ENST00000246529 NF1P21359 2839 aa12.79□□□□□ -0.36
LRFN3-201ENST00000246529 CEND1Q8N111 149 aa12.79□□□□□ -0.36
LRFN3-201ENST00000246529 IGHV3-73A0A0B4J1V6 119 aa12.78□□□□□ -0.36
LRFN3-201ENST00000246529 OR11H12B2RN74 326 aa12.78□□□□□ -0.36
LRFN3-201ENST00000246529 SMIM13P0DJ93 91 aa12.78□□□□□ -0.36
LRFN3-201ENST00000246529 C11orf44Q8N8P7 122 aa12.78□□□□□ -0.36
LRFN3-201ENST00000246529 KLHL30-AS1Q8NEE0 82 aa12.78□□□□□ -0.36
LRFN3-201ENST00000246529 OR11H2Q8NH07 326 aa12.78□□□□□ -0.36
LRFN3-201ENST00000246529 NHP2Q9NX24 153 aaKnown RBP12.78□□□□□ -0.36
LRFN3-201ENST00000246529 TRBV27A0A0K0K1C4 114 aa12.78□□□□□ -0.36
LRFN3-201ENST00000246529 PRADC1Q9BSG0 188 aa12.78□□□□□ -0.36
LRFN3-201ENST00000246529 CCDC168Q8NDH2 2452 aa12.77□□□□□ -0.37
LRFN3-201ENST00000246529 IGLV4-69A0A075B6H9 119 aa12.77□□□□□ -0.37
LRFN3-201ENST00000246529 TRBV6-5A0A0K0K1A5 114 aa12.77□□□□□ -0.37
LRFN3-201ENST00000246529 MYMXA0A1B0GTQ4 84 aa12.77□□□□□ -0.37
LRFN3-201ENST00000246529 GAGE12BA1L429 117 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms