RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 IGKV3D-20A0A0C4DH25 116 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 TYMSP04818 313 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 ASIPP42127 132 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 KRTAP10-1P60331 282 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 A0A1W2PPQ1 181 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 SNURFLB1AK76 121 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 EREGO14944 169 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 APOC3P02656 99 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 S100A4P26447 101 aaKnown RBP9.47□□□□□ -0.89
DDX39A-201ENST00000242776 CT83Q5H943 113 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 SVBPQ8N300 66 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 OR10G8Q8NGN5 311 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
DDX39A-201ENST00000242776 ANAPC16Q96DE5 110 aa9.47□□□□□ -0.89
DDX39A-201ENST00000242776 TMSB15BA0A087X1C1 80 aa9.46□□□□□ -0.9
DDX39A-201ENST00000242776 A8MWL6 223 aa9.46□□□□□ -0.9
DDX39A-201ENST00000242776 MT-ND4LP03901 98 aa9.46□□□□□ -0.9
DDX39A-201ENST00000242776 RPL19P84098 196 aaKnown RBP9.46□□□□□ -0.9
DDX39A-201ENST00000242776 Q6ZRN7 208 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-201ENST00000242776 TP53TG3Q9ULZ0 132 aa9.46□□□□□ -0.9
DDX39A-201ENST00000242776 J3QL48 77 aa9.45□□□□□ -0.9
DDX39A-201ENST00000242776 GNRH2O43555 120 aa9.45□□□□□ -0.9
DDX39A-201ENST00000242776 SNAPINO95295 136 aa9.45□□□□□ -0.9
DDX39A-201ENST00000242776 DNLZQ5SXM8 178 aa9.45□□□□□ -0.9
DDX39A-201ENST00000242776 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
DDX39A-201ENST00000242776 TCL1AP56279 114 aa9.44□□□□□ -0.9
DDX39A-201ENST00000242776 RHEBQ15382 184 aa9.44□□□□□ -0.9
DDX39A-201ENST00000242776 SPXQ9BT56 116 aa9.44□□□□□ -0.9
DDX39A-201ENST00000242776 V9GYV3 84 aa9.44□□□□□ -0.9
DDX39A-201ENST00000242776 GRIFINA4D1Z8 144 aa9.43□□□□□ -0.9
DDX39A-201ENST00000242776 H3BVH4 76 aa9.43□□□□□ -0.9
DDX39A-201ENST00000242776 C11orf72Q8NBR9 251 aa9.43□□□□□ -0.9
DDX39A-201ENST00000242776 CLRN3Q8NCR9 226 aa9.43□□□□□ -0.9
DDX39A-201ENST00000242776 GSN-AS1Q9NRJ2 163 aa9.43□□□□□ -0.9
DDX39A-201ENST00000242776 IL36BQ9NZH7 164 aa9.43□□□□□ -0.9
DDX39A-201ENST00000242776 A0A096LPF7 62 aa9.42□□□□□ -0.9
DDX39A-201ENST00000242776 SIVA1O15304 175 aa9.42□□□□□ -0.9
DDX39A-201ENST00000242776 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
DDX39A-201ENST00000242776 CTDSP1Q9GZU7 261 aa9.42□□□□□ -0.9
DDX39A-201ENST00000242776 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
DDX39A-201ENST00000242776 SRRM2Q9UQ35 2752 aaKnown RBP9.42□□□□□ -0.9
DDX39A-201ENST00000242776 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
DDX39A-201ENST00000242776 ARMS2P0C7Q2 107 aa9.41□□□□□ -0.9
DDX39A-201ENST00000242776 GZMBP10144 247 aa9.41□□□□□ -0.9
DDX39A-201ENST00000242776 RNASE3P12724 160 aaKnown RBP9.41□□□□□ -0.9
DDX39A-201ENST00000242776 DAZ2Q13117 558 aaKnown RBP9.41□□□□□ -0.9
DDX39A-201ENST00000242776 Q6ZTI0 123 aa9.41□□□□□ -0.9
DDX39A-201ENST00000242776 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
DDX39A-201ENST00000242776 VSIG2Q96IQ7 327 aa9.41□□□□□ -0.9
DDX39A-201ENST00000242776 C9orf85Q96MD7 179 aa9.41□□□□□ -0.9
DDX39A-201ENST00000242776 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
DDX39A-201ENST00000242776 A0A087WWC5 75 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 F2Z2F3 143 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 SNAI2O43623 268 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 NXPH4O95158 308 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 OR5AL1P0C617 328 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 IGLC6P0CF74 106 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 CDPF1Q6NVV7 123 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 SYT8Q8NBV8 401 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 BORCS7Q96B45 105 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
DDX39A-201ENST00000242776 A0A087WTM6 91 aa9.4□□□□□ -0.91
DDX39A-201ENST00000242776 C7orf77A4D0Y5 90 aa9.4□□□□□ -0.91
DDX39A-201ENST00000242776 M0R2P5 195 aa9.4□□□□□ -0.91
DDX39A-201ENST00000242776 ZFP82Q8N141 532 aa9.4□□□□□ -0.91
DDX39A-201ENST00000242776 NAT8BQ9UHF3 227 aa9.4□□□□□ -0.91
DDX39A-201ENST00000242776 TRGV2A0A075B6R0 118 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 CTRLP40313 264 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 CACNG7P62955 275 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 SPANXN1Q5VSR9 72 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 KCNIP4Q6PIL6 250 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 Q6ZSN1 163 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 PTH2Q96A98 100 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
DDX39A-201ENST00000242776 TMEM242Q9NWH2 141 aa9.39□□□□□ -0.91
DDX39A-201ENST00000242776 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 SMIM27A0A1W2PRY6 76 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 H3BNG1 76 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 SPINK4O60575 86 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 ATP6V1G1O75348 118 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 IGHV3-53P01767 116 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 S100A1P23297 94 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 GCSHP23434 173 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
DDX39A-201ENST00000242776 PIK3CD-AS1Q5SR53 167 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 LYZL1Q6UWQ5 148 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 IMMP2LQ96T52 175 aa9.38□□□□□ -0.91
DDX39A-201ENST00000242776 S100PP25815 95 aa9.37□□□□□ -0.91
DDX39A-201ENST00000242776 ZNF876PQ49A33 203 aa9.37□□□□□ -0.91
DDX39A-201ENST00000242776 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
DDX39A-201ENST00000242776 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
DDX39A-201ENST00000242776 MRPL16Q9NX20 251 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms