RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ORMDL2Q53FV1 153 aa12.58□□□□□ -0.39
SSPN-201ENST00000242729 SUMO4Q6EEV6 95 aa12.58□□□□□ -0.39
SSPN-201ENST00000242729 TOMM6Q96B49 74 aa12.58□□□□□ -0.39
SSPN-201ENST00000242729 LENEPQ9Y5L5 61 aa12.58□□□□□ -0.39
SSPN-201ENST00000242729 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 IGHV3-73A0A0B4J1V6 119 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 B4DSR2 109 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 SCGB2A2Q13296 93 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 OR11H12B2RN74 326 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 PLNP26678 52 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 C18orf65Q6ZTR6 163 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 NEXN-AS1Q8NBZ9 246 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 OR11H1Q8NG94 326 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 FAM19A4Q96LR4 140 aa12.58□□□□□ -0.4
SSPN-201ENST00000242729 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
SSPN-201ENST00000242729 PLEKHB2Q96CS7 222 aa12.57□□□□□ -0.4
SSPN-201ENST00000242729 PRADC1Q9BSG0 188 aa12.57□□□□□ -0.4
SSPN-201ENST00000242729 PRSS47A8MTI9 375 aa12.56□□□□□ -0.4
SSPN-201ENST00000242729 HLA-DRB4P13762 266 aa12.56□□□□□ -0.4
SSPN-201ENST00000242729 SLC25A16P16260 332 aa12.56□□□□□ -0.4
SSPN-201ENST00000242729 LINC00315P59091 139 aa12.56□□□□□ -0.4
SSPN-201ENST00000242729 ZNF56Q15929 161 aa12.56□□□□□ -0.4
SSPN-201ENST00000242729 HLA-DRB4X5D2U9 266 aa12.56□□□□□ -0.4
SSPN-201ENST00000242729 PRRC2AP48634 2157 aaKnown RBP12.56□□□□□ -0.4
SSPN-201ENST00000242729 PSMB8P28062 276 aa12.55□□□□□ -0.4
SSPN-201ENST00000242729 Q8N1Y9 231 aa12.55□□□□□ -0.4
SSPN-201ENST00000242729 TSHBP01222 138 aa12.55□□□□□ -0.4
SSPN-201ENST00000242729 CFHR3Q02985 330 aa12.55□□□□□ -0.4
SSPN-201ENST00000242729 SCGB1D4Q6XE38 83 aa12.55□□□□□ -0.4
SSPN-201ENST00000242729 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
SSPN-201ENST00000242729 IGHV3-64A0A075B6Q5 118 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 KLLNB2CW77 178 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 ID1P41134 155 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 C20orf78Q9BR46 151 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 MTORP42345 2549 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 IGHV4OR15-8A0A075B7B6 117 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 A0A087WW49 117 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 ZNF815PA8K554 130 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 H3BMG7 143 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 K7ERU9 68 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 KIF25-AS1Q9Y6Z4 181 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 ACANP16112 2415 aa12.54□□□□□ -0.4
SSPN-201ENST00000242729 MYMXA0A1B0GTQ4 84 aa12.53□□□□□ -0.4
SSPN-201ENST00000242729 SDHAF1A6NFY7 115 aa12.53□□□□□ -0.4
SSPN-201ENST00000242729 C11orf86A6NJI1 115 aa12.53□□□□□ -0.4
SSPN-201ENST00000242729 NDUFS8O00217 210 aa12.53□□□□□ -0.4
SSPN-201ENST00000242729 CRYGDP07320 174 aa12.53□□□□□ -0.4
SSPN-201ENST00000242729 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
SSPN-201ENST00000242729 APCP25054 2843 aa12.53□□□□□ -0.4
SSPN-201ENST00000242729 H3BUA1 57 aa12.52□□□□□ -0.4
SSPN-201ENST00000242729 LGALS1P09382 135 aaKnown RBP12.52□□□□□ -0.4
SSPN-201ENST00000242729 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.4
SSPN-201ENST00000242729 KNCNA6PVL3 124 aa12.52□□□□□ -0.41
SSPN-201ENST00000242729 ATP6V0BQ99437 205 aa12.52□□□□□ -0.41
SSPN-201ENST00000242729 IGLL5B9A064 214 aa12.52□□□□□ -0.41
SSPN-201ENST00000242729 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
SSPN-201ENST00000242729 TMEM170BQ5T4T1 132 aa12.52□□□□□ -0.41
SSPN-201ENST00000242729 ZNF479Q96JC4 524 aa12.52□□□□□ -0.41
SSPN-201ENST00000242729 TM2D2Q9BX73 214 aa12.52□□□□□ -0.41
SSPN-201ENST00000242729 P0DMU3 169 aa12.51□□□□□ -0.41
SSPN-201ENST00000242729 FAM231AP0DMU4 169 aa12.51□□□□□ -0.41
SSPN-201ENST00000242729 FAM231CP0DMU5 169 aa12.51□□□□□ -0.41
SSPN-201ENST00000242729 WFDC2Q14508 124 aa12.51□□□□□ -0.41
SSPN-201ENST00000242729 PROK1P58294 105 aa12.51□□□□□ -0.41
SSPN-201ENST00000242729 KRTAP10-9P60411 292 aa12.51□□□□□ -0.41
SSPN-201ENST00000242729 TRAV12-1A0A0B4J245 112 aa12.5□□□□□ -0.41
SSPN-201ENST00000242729 SRSF9Q13242 221 aaKnown RBP eCLIP12.5□□□□□ -0.41
SSPN-201ENST00000242729 TEX48A0A1B0GUV7 120 aa12.5□□□□□ -0.41
SSPN-201ENST00000242729 SLURP1P55000 103 aa12.5□□□□□ -0.41
SSPN-201ENST00000242729 SNRPD3P62318 126 aaKnown RBP12.5□□□□□ -0.41
SSPN-201ENST00000242729 COTL1Q14019 142 aa12.5□□□□□ -0.41
SSPN-201ENST00000242729 A0A0J9YX75 114 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
SSPN-201ENST00000242729 ZNF876PQ49A33 203 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 SH2D6Q7Z4S9 175 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 APRG1Q8IVJ8 170 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 Q9UF83 564 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 ITPR3Q14573 2671 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 HOXA3O43365 443 aaPredicted RBP12.49□□□□□ -0.41
SSPN-201ENST00000242729 APOMO95445 188 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
SSPN-201ENST00000242729 FLNAP21333 2647 aaKnown RBP12.48□□□□□ -0.41
SSPN-201ENST00000242729 RNASE13Q5GAN3 156 aaKnown RBP12.48□□□□□ -0.41
SSPN-201ENST00000242729 C11orf44Q8N8P7 122 aa12.48□□□□□ -0.41
SSPN-201ENST00000242729 IGLV4-69A0A075B6H9 119 aa12.48□□□□□ -0.41
SSPN-201ENST00000242729 TRBV7-3A0A075B6L6 115 aa12.48□□□□□ -0.41
SSPN-201ENST00000242729 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
SSPN-201ENST00000242729 MORN3Q6PF18 240 aaPredicted RBP12.48□□□□□ -0.41
SSPN-201ENST00000242729 RBMY1A1P0DJD3 496 aaKnown RBP12.47□□□□□ -0.41
SSPN-201ENST00000242729 RBMY1CP0DJD4 496 aa12.47□□□□□ -0.41
SSPN-201ENST00000242729 POLR2KP53803 58 aaKnown RBP12.47□□□□□ -0.41
SSPN-201ENST00000242729 RBMY1FQ15415 496 aaKnown RBP12.47□□□□□ -0.41
SSPN-201ENST00000242729 LINC01356Q8N9X3 169 aa12.47□□□□□ -0.41
SSPN-201ENST00000242729 ZNRF2Q8NHG8 242 aa12.47□□□□□ -0.41
SSPN-201ENST00000242729 UBR5O95071 2799 aaPredicted RBP12.47□□□□□ -0.41
SSPN-201ENST00000242729 CEMP1Q6PRD7 247 aaPredicted RBP12.47□□□□□ -0.41
SSPN-201ENST00000242729 OR5A1Q8NGJ0 315 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms