RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 TRAV8-4A0A0B4J246 113 aa10.81□□□□□ -0.68
SHPK-201ENST00000225519 G3V318 75 aa10.81□□□□□ -0.68
SHPK-201ENST00000225519 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
SHPK-201ENST00000225519 GNRH2O43555 120 aa10.81□□□□□ -0.68
SHPK-201ENST00000225519 IFITM1P13164 125 aa10.81□□□□□ -0.68
SHPK-201ENST00000225519 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
SHPK-201ENST00000225519 TRAV4A0A0B4J268 109 aa10.81□□□□□ -0.68
SHPK-201ENST00000225519 NDUFV3P56181 108 aaKnown RBP10.81□□□□□ -0.68
SHPK-201ENST00000225519 ZNF256Q9Y2P7 627 aaPredicted RBP10.81□□□□□ -0.68
SHPK-201ENST00000225519 ATP6V0E1O15342 81 aa10.8□□□□□ -0.68
SHPK-201ENST00000225519 FAM110DQ8TAY7 271 aaPredicted RBP10.8□□□□□ -0.68
SHPK-201ENST00000225519 PRSS2P07478 247 aa10.8□□□□□ -0.68
SHPK-201ENST00000225519 TSPEAR-AS2P59090 65 aa10.8□□□□□ -0.68
SHPK-201ENST00000225519 FAM74A4Q5TZK3 123 aa10.8□□□□□ -0.68
SHPK-201ENST00000225519 MTORP42345 2549 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 UCNP55089 124 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 SMIM20Q8N5G0 67 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 MRPL53Q96EL3 112 aaKnown RBP10.79□□□□□ -0.68
SHPK-201ENST00000225519 JMJD1CQ15652 2540 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 A0A087WWL8 130 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 CRYGDP07320 174 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 ATXN8Q156A1 80 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 C9orf139Q6ZV77 190 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 Q8N1Y9 231 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 LINC00477Q96M19 166 aa10.79□□□□□ -0.68
SHPK-201ENST00000225519 CLPSL1A2RUU4 121 aa10.78□□□□□ -0.68
SHPK-201ENST00000225519 CCDC179H3BU77 68 aa10.78□□□□□ -0.68
SHPK-201ENST00000225519 RHODO00212 210 aa10.78□□□□□ -0.68
SHPK-201ENST00000225519 C15orf53Q8NAA6 179 aa10.78□□□□□ -0.68
SHPK-201ENST00000225519 IGLV4-69A0A075B6H9 119 aa10.78□□□□□ -0.68
SHPK-201ENST00000225519 AJUBAQ96IF1 538 aa10.78□□□□□ -0.68
SHPK-201ENST00000225519 SBSPONQ8IVN8 264 aa10.78□□□□□ -0.68
SHPK-201ENST00000225519 LY6G5BQ8NDX9 201 aa10.78□□□□□ -0.68
SHPK-201ENST00000225519 MYO9AB2RTY4 2548 aa10.77□□□□□ -0.68
SHPK-201ENST00000225519 IGHV1-69DA0A0B4J2H0 117 aa10.77□□□□□ -0.68
SHPK-201ENST00000225519 M0R1W7 72 aa10.77□□□□□ -0.68
SHPK-201ENST00000225519 VCYO14598 125 aa10.77□□□□□ -0.68
SHPK-201ENST00000225519 Q8N9W7 124 aa10.77□□□□□ -0.68
SHPK-201ENST00000225519 CCDC140Q96MF4 163 aa10.77□□□□□ -0.68
SHPK-201ENST00000225519 ABCA12Q86UK0 2595 aa10.77□□□□□ -0.68
SHPK-201ENST00000225519 CRLF1O75462 422 aa10.77□□□□□ -0.69
SHPK-201ENST00000225519 CITED1Q99966 193 aa10.77□□□□□ -0.69
SHPK-201ENST00000225519 LINC00527Q9UJ94 153 aa10.77□□□□□ -0.69
SHPK-201ENST00000225519 F6UB75 175 aa10.77□□□□□ -0.69
SHPK-201ENST00000225519 IGHV3-33P01772 117 aa10.77□□□□□ -0.69
SHPK-201ENST00000225519 LINC01620Q4KN68 170 aa10.77□□□□□ -0.69
SHPK-201ENST00000225519 MUSTN1Q8IVN3 82 aa10.77□□□□□ -0.69
SHPK-201ENST00000225519 TMEM141Q96I45 108 aa10.77□□□□□ -0.69
SHPK-201ENST00000225519 C20orf173Q96LM9 149 aa10.76□□□□□ -0.69
SHPK-201ENST00000225519 TEX49A0A1B0GTD5 131 aa10.76□□□□□ -0.69
SHPK-201ENST00000225519 SDHAF1A6NFY7 115 aa10.76□□□□□ -0.69
SHPK-201ENST00000225519 ODF3BA8MYP8 253 aa10.76□□□□□ -0.69
SHPK-201ENST00000225519 TSHBP01222 138 aa10.76□□□□□ -0.69
SHPK-201ENST00000225519 SRD5A1P18405 259 aa10.76□□□□□ -0.69
SHPK-201ENST00000225519 C2orf82Q6UX34 121 aa10.76□□□□□ -0.69
SHPK-201ENST00000225519 JPT2Q9H910 190 aa10.76□□□□□ -0.69
SHPK-201ENST00000225519 ZFAND2AQ8N6M9 145 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 LENEPQ9Y5L5 61 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 AKAP13Q12802 2813 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 H3BMM0 161 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 OVOL1O14753 267 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 NHLRC4P0CG21 123 aaPredicted RBP10.75□□□□□ -0.69
SHPK-201ENST00000225519 FAM159AQ6UWV7 190 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 ZNRF2Q8NHG8 242 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 UBE2WQ96B02 151 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
SHPK-201ENST00000225519 HERV-K104P63124 156 aa10.75□□□□□ -0.69
SHPK-201ENST00000225519 OPRPNQ99935 248 aaPredicted RBP10.75□□□□□ -0.69
SHPK-201ENST00000225519 TRBV7-9A0A0J9YWB2 115 aa10.74□□□□□ -0.69
SHPK-201ENST00000225519 USP9YO00507 2555 aaPredicted RBP10.74□□□□□ -0.69
SHPK-201ENST00000225519 SPENQ96T58 3664 aaKnown RBP10.74□□□□□ -0.69
SHPK-201ENST00000225519 HELZ2Q9BYK8 2649 aaKnown RBP10.74□□□□□ -0.69
SHPK-201ENST00000225519 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
SHPK-201ENST00000225519 IGIPA6NJ69 53 aa10.74□□□□□ -0.69
SHPK-201ENST00000225519 OOSP1A8MZH6 123 aa10.74□□□□□ -0.69
SHPK-201ENST00000225519 ZNF56Q15929 161 aa10.74□□□□□ -0.69
SHPK-201ENST00000225519 GPHB5Q86YW7 130 aa10.74□□□□□ -0.69
SHPK-201ENST00000225519 ADARB2-AS1A8MUL3 147 aa10.73□□□□□ -0.69
SHPK-201ENST00000225519 SUMO4Q6EEV6 95 aa10.73□□□□□ -0.69
SHPK-201ENST00000225519 Q8N6K4 173 aa10.73□□□□□ -0.69
SHPK-201ENST00000225519 COX6CP09669 75 aa10.73□□□□□ -0.69
SHPK-201ENST00000225519 MINOS1Q5TGZ0 78 aa10.73□□□□□ -0.69
SHPK-201ENST00000225519 MINOS1-NBL1R4GNA1 71 aa10.73□□□□□ -0.69
SHPK-201ENST00000225519 HIVEP3Q5T1R4 2406 aa10.73□□□□□ -0.69
SHPK-201ENST00000225519 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
SHPK-201ENST00000225519 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
SHPK-201ENST00000225519 TMEM263Q8WUH6 116 aaKnown RBP10.72□□□□□ -0.69
SHPK-201ENST00000225519 CSMD1Q96PZ7 3565 aa10.71□□□□□ -0.69
SHPK-201ENST00000225519 NPC2P61916 151 aa10.71□□□□□ -0.69
SHPK-201ENST00000225519 USP24Q9UPU5 2620 aa10.71□□□□□ -0.69
SHPK-201ENST00000225519 CENPVL3A0A0U1RRI6 287 aa10.71□□□□□ -0.69
SHPK-201ENST00000225519 LEPROTO15243 131 aa10.71□□□□□ -0.69
SHPK-201ENST00000225519 RNASE3P12724 160 aaKnown RBP10.71□□□□□ -0.69
SHPK-201ENST00000225519 ZNF876PQ49A33 203 aa10.71□□□□□ -0.69
SHPK-201ENST00000225519 MEIG1Q5JSS6 88 aa10.71□□□□□ -0.69
SHPK-201ENST00000225519 M0R2P5 195 aa10.71□□□□□ -0.7
SHPK-201ENST00000225519 PRR30Q53SZ7 412 aaPredicted RBP10.7□□□□□ -0.7
SHPK-201ENST00000225519 A0A0B4J2C4 111 aa10.7□□□□□ -0.7
SHPK-201ENST00000225519 TRBV10-2A0A0K0K1G8 114 aa10.7□□□□□ -0.7
SHPK-201ENST00000225519 ELANEP08246 267 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms