RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 COX7B2Q8TF08 81 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 FBXL19-AS1Q494R0 122 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 SUMO4Q6EEV6 95 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 OPRPNQ99935 248 aaPredicted RBP3.43□□□□□ -1.86
CHD9-201ENST00000219084 MORN5Q5VZ52 161 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 MUC7Q8TAX7 377 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 Q9H8V8 135 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 ZNRF2Q8NHG8 242 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 TPSG1Q9NRR2 321 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 LGALS9O00182 355 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 TIMM17BO60830 172 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 CTSGP08311 255 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 BRD3OSQ6XYD6 125 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 ZNF524Q96C55 264 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 MRPL36Q9P0J6 103 aaKnown RBP3.43□□□□□ -1.86
CHD9-201ENST00000219084 TECTAO75443 2155 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 RPL35AP18077 110 aaKnown RBP3.43□□□□□ -1.86
CHD9-201ENST00000219084 LINC00643Q86TS7 51 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 C5orf56Q8N8D9 126 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 NDUFC1O43677 76 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 C4orf3Q8WVX3 66 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 ZNF503Q96F45 646 aa3.43□□□□□ -1.86
CHD9-201ENST00000219084 MED13LQ71F56 2210 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 IGHV7-81A0A0B4J1V7 117 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 CENPVL3A0A0U1RRI6 287 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 TEX22C9J3V5 150 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 EIF4EBP1Q13541 118 aaPredicted RBP3.42□□□□□ -1.86
CHD9-201ENST00000219084 MIAQ16674 131 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 KLK9Q9UKQ9 250 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 NDUFA11Q86Y39 141 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 ODF3L1Q8IXM7 274 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 C2orf70A6NJV1 201 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 KNCNA6PVL3 124 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 C5orf24Q7Z6I8 188 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 PIK3CD-AS1Q5SR53 167 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 UNQ6494/PRO21346Q6UXR6 183 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 NTN5Q8WTR8 489 aaPredicted RBP3.42□□□□□ -1.86
CHD9-201ENST00000219084 MP68P56378 58 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 AJUBAQ96IF1 538 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 PLA2G2EQ9NZK7 142 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 G3V318 75 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 IGFL4Q6B9Z1 124 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
CHD9-201ENST00000219084 COX7A2LO14548 114 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 IGLV1-47P01700 117 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 PRB3Q04118 309 aaPredicted RBP3.41□□□□□ -1.86
CHD9-201ENST00000219084 SND1-IT1Q9HBX3 110 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 TRAV4A0A0B4J268 109 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 DAZAP2Q15038 168 aaPredicted RBP3.41□□□□□ -1.86
CHD9-201ENST00000219084 TMEM263Q8WUH6 116 aaKnown RBP3.41□□□□□ -1.86
CHD9-201ENST00000219084 UQCRQO14949 82 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 NBL1P41271 181 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 C9orf66Q5T8R8 295 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 F5H768 121 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 PATE2Q6UY27 113 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 XCL2Q9UBD3 114 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 SORL1Q92673 2214 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 DEFB130BP0DP73 79 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 DEFB130AP0DP74 79 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 INSL3P51460 131 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 MLST8Q9BVC4 326 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 LINC00527Q9UJ94 153 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 TRAV26-1A0A087WT03 109 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 PFN2P35080 140 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 HAMPP81172 84 aa3.41□□□□□ -1.86
CHD9-201ENST00000219084 FGF23Q9GZV9 251 aaPredicted RBP3.41□□□□□ -1.86
CHD9-201ENST00000219084 GNLYP22749 145 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 FXYD2P54710 66 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 COL27A1Q8IZC6 1860 aaPredicted RBP3.4□□□□□ -1.86
CHD9-201ENST00000219084 IGHV3-53P01767 116 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 RUSC1-AS1Q66K80 236 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 MUSTN1Q8IVN3 82 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 WFDC12Q8WWY7 111 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 KMT2BQ9UMN6 2715 aaPredicted RBP3.4□□□□□ -1.86
CHD9-201ENST00000219084 FAM236AA0A1B0GUQ0 79 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 FAM236BA0A1B0GV22 79 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 WT1P19544 449 aaPredicted RBP3.4□□□□□ -1.86
CHD9-201ENST00000219084 NDUFV3P56181 108 aaKnown RBP3.4□□□□□ -1.86
CHD9-201ENST00000219084 RBM3P98179 157 aaKnown RBP3.4□□□□□ -1.86
CHD9-201ENST00000219084 ZNRD1Q9P1U0 126 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 CTSZQ9UBR2 303 aa3.4□□□□□ -1.86
CHD9-201ENST00000219084 PSMB8P28062 276 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 Q6ZUT4 128 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 U3KQE9 123 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 FAM240AA0A1B0GVK7 77 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 ODF3BA8MYP8 253 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 WISP1O95388 367 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 ANGP03950 147 aaKnown RBP3.4□□□□□ -1.87
CHD9-201ENST00000219084 CDPF1Q6NVV7 123 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 IGLC6P0CF74 106 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 RPL39LQ96EH5 51 aaKnown RBP3.4□□□□□ -1.87
CHD9-201ENST00000219084 TRBV30A0A0K0K1B3 111 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 CCL24O00175 119 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 AMTNQ6UX39 209 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 NEXN-AS1Q8NBZ9 246 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 MBD6Q96DN6 1003 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 CNFNQ9BYD5 112 aa3.4□□□□□ -1.87
CHD9-201ENST00000219084 TRAV12-2A0A075B6T6 113 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 A0A0J9YX75 114 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms