RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MAPK1IP1LQ8NDC0 245 aa8.09□□□□□ -1.12
VCL-201ENST00000211998 IGHV4-4A0A075B6R2 117 aa8.08□□□□□ -1.12
VCL-201ENST00000211998 VSIG2Q96IQ7 327 aa8.08□□□□□ -1.12
VCL-201ENST00000211998 MRPS12O15235 138 aaKnown RBP8.08□□□□□ -1.12
VCL-201ENST00000211998 SHANK1Q9Y566 2161 aa8.08□□□□□ -1.12
VCL-201ENST00000211998 IGLV2-14P01704 120 aa8.08□□□□□ -1.12
VCL-201ENST00000211998 DAZ2Q13117 558 aaKnown RBP8.08□□□□□ -1.12
VCL-201ENST00000211998 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
VCL-201ENST00000211998 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
VCL-201ENST00000211998 LINC00322Q6ZN03 302 aaPredicted RBP8.08□□□□□ -1.12
VCL-201ENST00000211998 DAZ4Q86SG3 579 aaKnown RBP8.08□□□□□ -1.12
VCL-201ENST00000211998 DAZ3Q9NR90 486 aaKnown RBP8.08□□□□□ -1.12
VCL-201ENST00000211998 XCL1P47992 114 aa8.07□□□□□ -1.12
VCL-201ENST00000211998 CLPSL2Q6UWE3 100 aa8.07□□□□□ -1.12
VCL-201ENST00000211998 FUSP35637 526 aaKnown RBP eCLIP8.07□□□□□ -1.12
VCL-201ENST00000211998 PLXND1Q9Y4D7 1925 aa8.07□□□□□ -1.12
VCL-201ENST00000211998 DOPEY2Q9Y3R5 2298 aa8.07□□□□□ -1.12
VCL-201ENST00000211998 TSC2P49815 1807 aa8.07□□□□□ -1.12
VCL-201ENST00000211998 BUB3O43684 328 aa8.07□□□□□ -1.12
VCL-201ENST00000211998 C5orf38Q86SI9 138 aa8.07□□□□□ -1.12
VCL-201ENST00000211998 IGKV1-17P01599 117 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 IGF2-ASQ6U949 168 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 I3L2K1 104 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 NFE4Q86UQ8 179 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 NDUFS5O43920 106 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 WI2-2373I1.2A0A1W2PRP0 233 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 MIAQ16674 131 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 Q6ZSR3 168 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 PRSS33Q8NF86 280 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 FAM110AQ9BQ89 295 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 VPREB3Q9UKI3 123 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 SPTBN1Q01082 2364 aaKnown RBP8.06□□□□□ -1.12
VCL-201ENST00000211998 IGHV1-58A0A0C4DH39 117 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 IGHV3-30-3P0DP02 117 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 COX7CP15954 63 aa8.06□□□□□ -1.12
VCL-201ENST00000211998 TRBV6-1A0A0K0K1D8 114 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 HOXB4P17483 251 aaPredicted RBP8.05□□□□□ -1.12
VCL-201ENST00000211998 SERP2Q8N6R1 65 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 PRAC2D3DTV9 90 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 C11orf53Q8IXP5 236 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 IMUPQ9GZP8 106 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 COX7A2LO14548 114 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 EML6Q6ZMW3 1958 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 CXCL5P42830 114 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 HIST2H2BCQ6DN03 193 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 UFSP1Q6NVU6 142 aa8.05□□□□□ -1.12
VCL-201ENST00000211998 TMEM256-PLSCR3K7ERE1 68 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 IGFL2Q6UWQ7 119 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 MBD6Q96DN6 1003 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 TANC1Q9C0D5 1861 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 PLXNA2O75051 1894 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 CADP27708 2225 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 K7EIM0 57 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 TRIAP1O43715 76 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 P0DMU3 169 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 FAM231AP0DMU4 169 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 FAM231CP0DMU5 169 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 KIAA1671Q9BY89 1806 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 ZNF295-AS1Q8N0V1 137 aa8.04□□□□□ -1.12
VCL-201ENST00000211998 ENHOQ6UWT2 76 aa8.03□□□□□ -1.12
VCL-201ENST00000211998 TEX22C9J3V5 150 aa8.03□□□□□ -1.12
VCL-201ENST00000211998 ANGP03950 147 aaKnown RBP8.03□□□□□ -1.12
VCL-201ENST00000211998 MRPL36Q9P0J6 103 aaKnown RBP8.03□□□□□ -1.12
VCL-201ENST00000211998 SPTBN2O15020 2390 aa8.03□□□□□ -1.12
VCL-201ENST00000211998 A0A0J9YY99 117 aa8.03□□□□□ -1.12
VCL-201ENST00000211998 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
VCL-201ENST00000211998 ROS1P08922 2347 aa8.03□□□□□ -1.12
VCL-201ENST00000211998 RPL18AQ02543 176 aaKnown RBP8.02□□□□□ -1.12
VCL-201ENST00000211998 RITA1Q96K30 269 aa8.02□□□□□ -1.12
VCL-201ENST00000211998 CACNA1GO43497 2377 aa8.02□□□□□ -1.12
VCL-201ENST00000211998 CHKB-CPT1BH3BT56 60 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 FANCD2OSQ96PS1 177 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 A0A096LPF7 62 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 DEFB112Q30KQ8 113 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 NEXN-AS1Q8NBZ9 246 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 NLRC5Q86WI3 1866 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 TRBV30A0A0K0K1B3 111 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 H3BQ85 93 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 IGHV3-33P01772 117 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 C20orf173Q96LM9 149 aa8.02□□□□□ -1.13
VCL-201ENST00000211998 CENPVL3A0A0U1RRI6 287 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 TIMM17BO60830 172 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 Q8N976 141 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 KRTAP27-1Q3LI81 207 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 CTSZQ9UBR2 303 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 USP17L23D6RBM5 183 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 HIST2H2BDQ6DRA6 164 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 Q6Q795 121 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 MLST8Q9BVC4 326 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 COL6A6A6NMZ7 2263 aa8.01□□□□□ -1.13
VCL-201ENST00000211998 NCR3O14931 201 aa8□□□□□ -1.13
VCL-201ENST00000211998 DEFB113Q30KQ7 82 aa8□□□□□ -1.13
VCL-201ENST00000211998 HIGD2BQ4VC39 106 aa8□□□□□ -1.13
VCL-201ENST00000211998 ATP5EP2Q5VTU8 51 aa8□□□□□ -1.13
VCL-201ENST00000211998 NPBQ8NG41 125 aa8□□□□□ -1.13
VCL-201ENST00000211998 RNF138Q8WVD3 245 aa8□□□□□ -1.13
VCL-201ENST00000211998 LINC00310P59036 64 aa8□□□□□ -1.13
VCL-201ENST00000211998 C20orf203Q8NBC4 194 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms