RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 Q8N1Y9 231 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
CLDN11-201ENST00000064724 TSHBP01222 138 aa12.85□□□□□ -0.35
CLDN11-201ENST00000064724 CRYGDP07320 174 aa12.85□□□□□ -0.35
CLDN11-201ENST00000064724 FABP2P12104 132 aa12.85□□□□□ -0.35
CLDN11-201ENST00000064724 IGHV1OR15-1A0A075B7D0 117 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 SYT8Q8NBV8 401 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 KIR2DL4Q99706 377 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 SPCS1Q9Y6A9 102 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 F5H697 171 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 IGKV3-20P01619 116 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 RIPPLY3P57055 190 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 TP53TG1Q9Y2A0 90 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 CRYBG3Q68DQ2 2970 aa12.84□□□□□ -0.35
CLDN11-201ENST00000064724 SDHAF1A6NFY7 115 aa12.83□□□□□ -0.36
CLDN11-201ENST00000064724 AMTNQ6UX39 209 aa12.83□□□□□ -0.36
CLDN11-201ENST00000064724 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
CLDN11-201ENST00000064724 NHP2Q9NX24 153 aaKnown RBP12.83□□□□□ -0.36
CLDN11-201ENST00000064724 TRBV7-3A0A075B6L6 115 aa12.83□□□□□ -0.36
CLDN11-201ENST00000064724 K7ERJ3 54 aa12.83□□□□□ -0.36
CLDN11-201ENST00000064724 SPINK13Q1W4C9 94 aa12.83□□□□□ -0.36
CLDN11-201ENST00000064724 TIMM17AQ99595 171 aa12.83□□□□□ -0.36
CLDN11-201ENST00000064724 M0QY20 66 aa12.82□□□□□ -0.36
CLDN11-201ENST00000064724 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
CLDN11-201ENST00000064724 HIST1H4GQ99525 98 aa12.82□□□□□ -0.36
CLDN11-201ENST00000064724 PRADC1Q9BSG0 188 aa12.82□□□□□ -0.36
CLDN11-201ENST00000064724 USP9YO00507 2555 aaPredicted RBP12.81□□□□□ -0.36
CLDN11-201ENST00000064724 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
CLDN11-201ENST00000064724 FBN2P35556 2912 aa12.81□□□□□ -0.36
CLDN11-201ENST00000064724 IGLV4-69A0A075B6H9 119 aa12.81□□□□□ -0.36
CLDN11-201ENST00000064724 HOXA3O43365 443 aaPredicted RBP12.81□□□□□ -0.36
CLDN11-201ENST00000064724 PMVKQ15126 192 aa12.81□□□□□ -0.36
CLDN11-201ENST00000064724 MORN3Q6PF18 240 aaPredicted RBP12.81□□□□□ -0.36
CLDN11-201ENST00000064724 PRB1P04280 392 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 FAM74A4Q5TZK3 123 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 Q8N2B8 174 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 BEX4Q9NWD9 120 aaPredicted RBP12.8□□□□□ -0.36
CLDN11-201ENST00000064724 MYO18BQ8IUG5 2567 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 CSMD2Q7Z408 3487 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 ACACBO00763 2458 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 K7ERU9 68 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 RPL39P62891 51 aaKnown RBP12.8□□□□□ -0.36
CLDN11-201ENST00000064724 C12orf74Q32Q52 190 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 TCTEX1D4Q5JR98 221 aa12.8□□□□□ -0.36
CLDN11-201ENST00000064724 ZNF256Q9Y2P7 627 aaPredicted RBP12.8□□□□□ -0.36
CLDN11-201ENST00000064724 A0A1B0GWB2 263 aa12.79□□□□□ -0.36
CLDN11-201ENST00000064724 UTP20O75691 2785 aaKnown RBP12.79□□□□□ -0.36
CLDN11-201ENST00000064724 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
CLDN11-201ENST00000064724 RNF151Q2KHN1 245 aa12.79□□□□□ -0.36
CLDN11-201ENST00000064724 TRGV11A0A075B6L2 103 aa12.78□□□□□ -0.36
CLDN11-201ENST00000064724 A8MTW9 85 aa12.78□□□□□ -0.36
CLDN11-201ENST00000064724 IGLL5B9A064 214 aa12.78□□□□□ -0.36
CLDN11-201ENST00000064724 TRPT1Q86TN4 253 aaKnown RBP12.78□□□□□ -0.36
CLDN11-201ENST00000064724 RHOHQ15669 191 aa12.77□□□□□ -0.36
CLDN11-201ENST00000064724 ZNF56Q15929 161 aa12.77□□□□□ -0.36
CLDN11-201ENST00000064724 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.36
CLDN11-201ENST00000064724 PCP4P48539 62 aa12.77□□□□□ -0.37
CLDN11-201ENST00000064724 ZNF876PQ49A33 203 aa12.77□□□□□ -0.37
CLDN11-201ENST00000064724 BBC3Q96PG8 261 aaPredicted RBP12.77□□□□□ -0.37
CLDN11-201ENST00000064724 ZNF815PA8K554 130 aa12.76□□□□□ -0.37
CLDN11-201ENST00000064724 KRTAP10-9P60411 292 aa12.76□□□□□ -0.37
CLDN11-201ENST00000064724 TRAV2A0A0B4J234 112 aa12.76□□□□□ -0.37
CLDN11-201ENST00000064724 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
CLDN11-201ENST00000064724 DEFB113Q30KQ7 82 aa12.76□□□□□ -0.37
CLDN11-201ENST00000064724 LRRC75A-AS1Q8N1F1 130 aa12.76□□□□□ -0.37
CLDN11-201ENST00000064724 DEFB104AQ8WTQ1 72 aa12.76□□□□□ -0.37
CLDN11-201ENST00000064724 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
CLDN11-201ENST00000064724 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
CLDN11-201ENST00000064724 SLURP1P55000 103 aa12.75□□□□□ -0.37
CLDN11-201ENST00000064724 HERVK_113P61574 105 aa12.75□□□□□ -0.37
CLDN11-201ENST00000064724 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
CLDN11-201ENST00000064724 CD300EQ496F6 205 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-201ENST00000064724 ZANQ9Y493 2812 aa12.75□□□□□ -0.37
CLDN11-201ENST00000064724 C18orf65Q6ZTR6 163 aa12.74□□□□□ -0.37
CLDN11-201ENST00000064724 ZNF479Q96JC4 524 aa12.74□□□□□ -0.37
CLDN11-201ENST00000064724 EDA2RQ9HAV5 297 aa12.74□□□□□ -0.37
CLDN11-201ENST00000064724 SAP30O75446 220 aa12.74□□□□□ -0.37
CLDN11-201ENST00000064724 P0DMU3 169 aa12.74□□□□□ -0.37
CLDN11-201ENST00000064724 FAM231AP0DMU4 169 aa12.74□□□□□ -0.37
CLDN11-201ENST00000064724 FAM231CP0DMU5 169 aa12.74□□□□□ -0.37
CLDN11-201ENST00000064724 Q5PR19 223 aa12.74□□□□□ -0.37
CLDN11-201ENST00000064724 DOPEY2Q9Y3R5 2298 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 AGRNO00468 2067 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 KNCNA6PVL3 124 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 H3BMM0 161 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 DEFB131AP59861 70 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 SCGB2A2Q13296 93 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 DEFB136Q30KP8 78 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 ZNF843Q8N446 348 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 EMP1P54849 157 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 KLHL30-AS1Q8NEE0 82 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 ZNRF2Q8NHG8 242 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 PLEKHB2Q96CS7 222 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 VPS25Q9BRG1 176 aa12.73□□□□□ -0.37
CLDN11-201ENST00000064724 I3L3M4 83 aa12.72□□□□□ -0.37
CLDN11-201ENST00000064724 RRN3P1Q2M238 152 aa12.72□□□□□ -0.37
CLDN11-201ENST00000064724 NFE4Q86UQ8 179 aa12.72□□□□□ -0.37
CLDN11-201ENST00000064724 C20orf203Q8NBC4 194 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms