RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 XKRY2A2RUG3 117 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 H3BVH4 76 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 GNRH2O43555 120 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 SPRY2O43597 315 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 PRM2P04554 102 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 CXCL1P09341 107 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 S100A1P23297 94 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 ASIPP42127 132 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 TCL1AP56279 114 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 ZNF415Q09FC8 603 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 LGALS9CQ6DKI2 356 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 ATRAIDQ6UW56 229 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 TMEM263Q8WUH6 116 aaKnown RBP6.76□□□□□ -1.33
PHGDH-228ENST00000641847 CTDSP1Q9GZU7 261 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 RPS10P5Q9NQ39 176 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 TP53TG1Q9Y2A0 90 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 X6R8D5 127 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 HERC1Q15751 4861 aa6.76□□□□□ -1.33
PHGDH-228ENST00000641847 A0A087WWC5 75 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 A8MWL6 223 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 AZU1P20160 251 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 S100A4P26447 101 aaKnown RBP6.75□□□□□ -1.33
PHGDH-228ENST00000641847 RRN3P1Q2M238 152 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 ZNF575Q86XF7 245 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 OR11H2Q8NH07 326 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 RNASE8Q8TDE3 154 aaKnown RBP6.75□□□□□ -1.33
PHGDH-228ENST00000641847 TSKUQ8WUA8 353 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 NEU1Q99519 415 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 OVOL2Q9BRP0 275 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 TPPP3Q9BW30 176 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 IL36BQ9NZH7 164 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 MDFICQ9P1T7 246 aa6.75□□□□□ -1.33
PHGDH-228ENST00000641847 TIMM8BQ9Y5J9 83 aaPredicted RBP6.75□□□□□ -1.33
PHGDH-228ENST00000641847 SMIM9A6NGZ8 99 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 IGLC6P0CF74 106 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 RNASE3P12724 160 aaKnown RBP6.74□□□□□ -1.33
PHGDH-228ENST00000641847 LINC00336Q6ZUF6 198 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 FER1L6-AS1Q8NA97 138 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 C11orf72Q8NBR9 251 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 GTSF1Q8WW33 167 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 GFRA4Q9GZZ7 299 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 GSN-AS1Q9NRJ2 163 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 TMEM242Q9NWH2 141 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 NAT8BQ9UHF3 227 aa6.74□□□□□ -1.33
PHGDH-228ENST00000641847 IGHV4-28A0A0C4DH34 117 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 A0A1W2PPQ1 181 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 SMIM27A0A1W2PRY6 76 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 ARMS2P0C7Q2 107 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 MIFP14174 115 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 CTRLP40313 264 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 DNLZQ5SXM8 178 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 KCNIP4Q6PIL6 250 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 ZNF493Q6ZR52 646 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 Q8NAQ8 132 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 PGLYRP4Q96LB8 373 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 C9orf85Q96MD7 179 aa6.73□□□□□ -1.33
PHGDH-228ENST00000641847 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 MUC21A0A0G2JKD1 596 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 MUC21A0A140T8X8 626 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 FAM231BA6NCW3 169 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 HIGD1CA8MV81 97 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 SNURFLB1AK76 121 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 SNAI2O43623 268 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 S100PP25815 95 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 EMP1P54849 157 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 LYZL1Q6UWQ5 148 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 CBLN2Q8IUK8 224 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 BORCS7Q96B45 105 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 IMMP2LQ96T52 175 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 SCRT2Q9NQ03 307 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 PHLDA3Q9Y5J5 127 aa6.72□□□□□ -1.33
PHGDH-228ENST00000641847 PLAC8L1A1L4L8 177 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 F2Z2F3 143 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 M0R381 172 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 DEFB4AO15263 64 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 SCO1O75880 301 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 OR5AL1P0C617 328 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 FAM3BP58499 235 aaPredicted RBP6.71□□□□□ -1.34
PHGDH-228ENST00000641847 TMEM88Q6PEY1 159 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 OR10AG1Q8NH19 301 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 SSBP4Q9BWG4 385 aaPredicted RBP6.71□□□□□ -1.34
PHGDH-228ENST00000641847 SMCO4Q9NRQ5 59 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 URGCP-MRPS24S4R325 110 aa6.71□□□□□ -1.34
PHGDH-228ENST00000641847 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 MUC4Q99102 2169 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 EREGO14944 169 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 SPINK4O60575 86 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 NXPH4O95158 308 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 FOXA3P55318 350 aaPredicted RBP6.7□□□□□ -1.34
PHGDH-228ENST00000641847 SSTP61278 116 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 CACNG7P62955 275 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 DAZ2Q13117 558 aaKnown RBP6.7□□□□□ -1.34
PHGDH-228ENST00000641847 SPANXN1Q5VSR9 72 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 MRPL54Q6P161 138 aaKnown RBP6.7□□□□□ -1.34
PHGDH-228ENST00000641847 ZFP82Q8N141 532 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 SYT8Q8NBV8 401 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 SPXQ9BT56 116 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 NOP10Q9NPE3 64 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms