RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 GSN-AS1Q9NRJ2 163 aa7.19□□□□□ -1.26
PHGDH-215ENST00000641371 SORL1Q92673 2214 aa7.19□□□□□ -1.26
PHGDH-215ENST00000641371 M0R2Z0 102 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 M0R381 172 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 IGKV3-20P01619 116 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 LINC00614P0C842 121 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 RNASE3P12724 160 aaKnown RBP7.18□□□□□ -1.26
PHGDH-215ENST00000641371 AMTP48728 403 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 KRTAP10-3P60369 221 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 ZNF415Q09FC8 603 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 MRPL51Q4U2R6 128 aaKnown RBP7.18□□□□□ -1.26
PHGDH-215ENST00000641371 PDZD11Q5EBL8 140 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 MUC21Q5SSG8 566 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 FA2HQ7L5A8 372 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 TRPT1Q86TN4 253 aaKnown RBP7.18□□□□□ -1.26
PHGDH-215ENST00000641371 GTSCR1Q86UQ5 136 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 AMN1Q8IY45 258 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 DEFB125Q8N687 156 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 OR10AG1Q8NH19 301 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 C9orf85Q96MD7 179 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 NXT2Q9NPJ8 142 aaKnown RBP7.18□□□□□ -1.26
PHGDH-215ENST00000641371 ZMAT5Q9UDW3 170 aaKnown RBP7.18□□□□□ -1.26
PHGDH-215ENST00000641371 SELENOKQ9Y6D0 94 aa7.18□□□□□ -1.26
PHGDH-215ENST00000641371 IGHV3-16A0A0C4DH30 117 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 IFITM10A6NMD0 228 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 PRSS47A8MTI9 375 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 D6R8Y8 96 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 K7EMI3 77 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 JOSD1Q15040 202 aaPredicted RBP7.17□□□□□ -1.26
PHGDH-215ENST00000641371 IQCJQ1A5X6 159 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 PRSS3P2Q8NHM4 247 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 TMEM158Q8WZ71 300 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 SPXQ9BT56 116 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 AP5S1Q9NUS5 200 aa7.17□□□□□ -1.26
PHGDH-215ENST00000641371 AGRNO00468 2067 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 CBY3A6NI87 242 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 CRXO43186 299 aaPredicted RBP7.16□□□□□ -1.26
PHGDH-215ENST00000641371 GNRH2O43555 120 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 RNASEKQ6P5S7 137 aaKnown RBP7.16□□□□□ -1.26
PHGDH-215ENST00000641371 NIT1Q86X76 327 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 POM121L12Q8N7R1 296 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 WFDC9Q8NEX5 89 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 RNF185Q96GF1 192 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 C12orf57Q99622 126 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 ZNF747Q9BV97 191 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 GOLT1BQ9Y3E0 138 aa7.16□□□□□ -1.26
PHGDH-215ENST00000641371 TRAV12-2A0A075B6T6 113 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 LINC01549A6NIU2 74 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 WIPF1O43516 503 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 EVI2AP22794 236 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 G0S2P27469 103 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 LINC00310P59036 64 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 KIR3DS1Q14943 382 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 Q8N1Y9 231 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 C20orf78Q9BR46 151 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 HSPB8Q9UJY1 196 aa7.15□□□□□ -1.26
PHGDH-215ENST00000641371 TIMM8BQ9Y5J9 83 aaPredicted RBP7.15□□□□□ -1.26
PHGDH-215ENST00000641371 RBMY1BA6NDE4 496 aaKnown RBP7.14□□□□□ -1.27
PHGDH-215ENST00000641371 RBMY1EA6NEQ0 496 aaKnown RBP7.14□□□□□ -1.27
PHGDH-215ENST00000641371 LINC01546A6NGU7 62 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 A8MWV9 139 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 M0R2P5 195 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 TCAPO15273 167 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 RBMY1DP0C7P1 496 aaKnown RBP7.14□□□□□ -1.27
PHGDH-215ENST00000641371 RPL32P62910 135 aaKnown RBP7.14□□□□□ -1.27
PHGDH-215ENST00000641371 S100A12P80511 92 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 SHISA2Q6UWI4 295 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 RCHY1Q96PM5 261 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 LINC01587Q99440 93 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 TMEM208Q9BTX3 173 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 MSRB1Q9NZV6 116 aa7.14□□□□□ -1.27
PHGDH-215ENST00000641371 MUC21A0A0G2JKD1 596 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 MUC21A0A140T8X8 626 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 H7C1H1 209 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 RHODO00212 210 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 CIDEAO60543 219 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 SSTP61278 116 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 Q6ZQT7 251 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 Q8N8P6 123 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 EDA2RQ9HAV5 297 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 C19orf73Q9NVV2 129 aa7.13□□□□□ -1.27
PHGDH-215ENST00000641371 C20orf202A1L168 122 aa7.12□□□□□ -1.27
PHGDH-215ENST00000641371 NUPR1O60356 82 aa7.12□□□□□ -1.27
PHGDH-215ENST00000641371 LEPROTL1O95214 131 aa7.12□□□□□ -1.27
PHGDH-215ENST00000641371 PYY3Q5JQD4 70 aa7.12□□□□□ -1.27
PHGDH-215ENST00000641371 HIST2H2BDQ6DRA6 164 aa7.12□□□□□ -1.27
PHGDH-215ENST00000641371 TMEM263Q8WUH6 116 aaKnown RBP7.12□□□□□ -1.27
PHGDH-215ENST00000641371 CUBNO60494 3623 aa7.12□□□□□ -1.27
PHGDH-215ENST00000641371 FBN3Q75N90 2809 aa7.12□□□□□ -1.27
PHGDH-215ENST00000641371 MUC4Q99102 2169 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 KIR2DL5BA0A0G2JN68 375 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 KIR2DL5BA0A0G2JPC4 375 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 NPYP01303 97 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 HBDP02042 147 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 FXYD7P58549 80 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 ZNF124Q15973 351 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 PMCHL1Q16048 86 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 LGALS9BQ3B8N2 356 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms