RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 KHDC3LQ587J8 217 aa13.11□□□□□ -0.31
TARDBP-228ENST00000629725 GOLT1AQ6ZVE7 132 aa13.11□□□□□ -0.31
TARDBP-228ENST00000629725 SMIM3Q9BZL3 60 aa13.11□□□□□ -0.31
TARDBP-228ENST00000629725 URGCP-MRPS24S4R325 110 aa13.11□□□□□ -0.31
TARDBP-228ENST00000629725 A0A087WWC5 75 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 PGPEP1LA6NFU8 196 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 MPC2O95563 127 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 HNRNPA3P51991 378 aaKnown RBP13.1□□□□□ -0.31
TARDBP-228ENST00000629725 TAS2R45P59539 299 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 GAGE1Q13065 139 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 GAGE4Q13068 117 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 GAGE5Q13069 117 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 GAGE13Q4V321 117 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 ZNF506Q5JVG8 444 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 SCGB1C1Q8TD33 95 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
TARDBP-228ENST00000629725 DNAJC30Q96LL9 226 aa13.1□□□□□ -0.31
TARDBP-228ENST00000629725 SSNA1O43805 119 aa13.09□□□□□ -0.31
TARDBP-228ENST00000629725 EIF3GO75821 320 aaKnown RBP eCLIP13.09□□□□□ -0.31
TARDBP-228ENST00000629725 PET100P0DJ07 73 aa13.09□□□□□ -0.31
TARDBP-228ENST00000629725 LINC00694P0DN24 101 aa13.09□□□□□ -0.31
TARDBP-228ENST00000629725 CYB561D1Q8N8Q1 229 aa13.09□□□□□ -0.31
TARDBP-228ENST00000629725 C9orf85Q96MD7 179 aa13.09□□□□□ -0.31
TARDBP-228ENST00000629725 MARVELD1Q9BSK0 173 aa13.09□□□□□ -0.31
TARDBP-228ENST00000629725 MBD2Q9UBB5 411 aa13.09□□□□□ -0.31
TARDBP-228ENST00000629725 LRP2P98164 4655 aa13.08□□□□□ -0.32
TARDBP-228ENST00000629725 SEC11BP0C7V7 166 aa13.08□□□□□ -0.32
TARDBP-228ENST00000629725 RPL12P30050 165 aaKnown RBP13.08□□□□□ -0.32
TARDBP-228ENST00000629725 PTH2Q96A98 100 aa13.08□□□□□ -0.32
TARDBP-228ENST00000629725 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
TARDBP-228ENST00000629725 C11orf21Q9P2W6 132 aa13.07□□□□□ -0.32
TARDBP-228ENST00000629725 KLK12Q9UKR0 248 aa13.07□□□□□ -0.32
TARDBP-228ENST00000629725 TAAR5O14804 337 aa13.06□□□□□ -0.32
TARDBP-228ENST00000629725 ZFP2Q6ZN57 461 aa13.06□□□□□ -0.32
TARDBP-228ENST00000629725 NIT1Q86X76 327 aa13.06□□□□□ -0.32
TARDBP-228ENST00000629725 NDFIP1Q9BT67 221 aa13.06□□□□□ -0.32
TARDBP-228ENST00000629725 MT1HL1P0DM35 61 aa13.05□□□□□ -0.32
TARDBP-228ENST00000629725 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-228ENST00000629725 FGF8P55075 233 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-228ENST00000629725 TMEM75Q8N9X5 138 aa13.05□□□□□ -0.32
TARDBP-228ENST00000629725 OR2T35Q8NGX2 323 aa13.05□□□□□ -0.32
TARDBP-228ENST00000629725 UBE2WQ96B02 151 aa13.05□□□□□ -0.32
TARDBP-228ENST00000629725 SGK494Q96LW2 274 aa13.05□□□□□ -0.32
TARDBP-228ENST00000629725 PARLQ9H300 379 aa13.05□□□□□ -0.32
TARDBP-228ENST00000629725 WFDC1Q9HC57 220 aa13.05□□□□□ -0.32
TARDBP-228ENST00000629725 Q9UF83 564 aa13.05□□□□□ -0.32
TARDBP-228ENST00000629725 RNASE3P12724 160 aaKnown RBP13.04□□□□□ -0.32
TARDBP-228ENST00000629725 DEFA1P59665 94 aa13.04□□□□□ -0.32
TARDBP-228ENST00000629725 DEFA3P59666 94 aa13.04□□□□□ -0.32
TARDBP-228ENST00000629725 GNG5P63218 68 aa13.04□□□□□ -0.32
TARDBP-228ENST00000629725 C14orf177Q52M58 125 aa13.04□□□□□ -0.32
TARDBP-228ENST00000629725 A0A1W2PPV4 95 aa13.03□□□□□ -0.32
TARDBP-228ENST00000629725 A6NHS1 94 aa13.03□□□□□ -0.32
TARDBP-228ENST00000629725 A8MWV9 139 aa13.03□□□□□ -0.32
TARDBP-228ENST00000629725 PQLC2Q6ZP29 291 aa13.03□□□□□ -0.32
TARDBP-228ENST00000629725 OR10G9Q8NGN4 311 aa13.03□□□□□ -0.32
TARDBP-228ENST00000629725 LINC00479Q96M42 142 aa13.03□□□□□ -0.32
TARDBP-228ENST00000629725 SAMD10Q9BYL1 202 aa13.03□□□□□ -0.32
TARDBP-228ENST00000629725 GCGP01275 180 aa13.02□□□□□ -0.33
TARDBP-228ENST00000629725 RAB2AP61019 212 aa13.02□□□□□ -0.33
TARDBP-228ENST00000629725 ELOBQ15370 118 aa13.02□□□□□ -0.33
TARDBP-228ENST00000629725 ATRAIDQ6UW56 229 aa13.02□□□□□ -0.33
TARDBP-228ENST00000629725 A0A087WX48 190 aa13.01□□□□□ -0.33
TARDBP-228ENST00000629725 HMGB3O15347 200 aaKnown RBP13.01□□□□□ -0.33
TARDBP-228ENST00000629725 LGALSLQ3ZCW2 172 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-228ENST00000629725 C14orf178Q8N769 122 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-228ENST00000629725 TNXBP22105 4242 aa13□□□□□ -0.33
TARDBP-228ENST00000629725 Q0VG73 95 aa13□□□□□ -0.33
TARDBP-228ENST00000629725 PIK3CD-AS1Q5SR53 167 aa13□□□□□ -0.33
TARDBP-228ENST00000629725 KCNIP4Q6PIL6 250 aa13□□□□□ -0.33
TARDBP-228ENST00000629725 CHCHD7Q9BUK0 85 aa13□□□□□ -0.33
TARDBP-228ENST00000629725 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
TARDBP-228ENST00000629725 ZFP69Q49AA0 526 aa12.99□□□□□ -0.33
TARDBP-228ENST00000629725 Q6ZRU5 148 aa12.99□□□□□ -0.33
TARDBP-228ENST00000629725 OR10G7Q8NGN6 311 aa12.99□□□□□ -0.33
TARDBP-228ENST00000629725 S100A4P26447 101 aaKnown RBP12.98□□□□□ -0.33
TARDBP-228ENST00000629725 SMUG1Q53HV7 270 aa12.98□□□□□ -0.33
TARDBP-228ENST00000629725 UFSP1Q6NVU6 142 aa12.98□□□□□ -0.33
TARDBP-228ENST00000629725 C1orf43Q9BWL3 253 aa12.98□□□□□ -0.33
TARDBP-228ENST00000629725 JPT2Q9H910 190 aa12.98□□□□□ -0.33
TARDBP-228ENST00000629725 K7EQM0 130 aa12.97□□□□□ -0.33
TARDBP-228ENST00000629725 ARL14EPLP0DKL9 152 aa12.97□□□□□ -0.33
TARDBP-228ENST00000629725 DMRTA1Q5VZB9 504 aa12.97□□□□□ -0.33
TARDBP-228ENST00000629725 PSG8Q9UQ74 426 aa12.97□□□□□ -0.33
TARDBP-228ENST00000629725 TCRAP04437 139 aa12.96□□□□□ -0.33
TARDBP-228ENST00000629725 CDC34P49427 236 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-228ENST00000629725 HSD17B11Q8NBQ5 300 aa12.95□□□□□ -0.34
TARDBP-228ENST00000629725 OR2G3Q8NGZ4 309 aa12.95□□□□□ -0.34
TARDBP-228ENST00000629725 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
TARDBP-228ENST00000629725 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
TARDBP-228ENST00000629725 DGAT2L7PQ6IED9 249 aa12.94□□□□□ -0.34
TARDBP-228ENST00000629725 PRNTQ86SH4 94 aa12.94□□□□□ -0.34
TARDBP-228ENST00000629725 C5orf17Q8NAS9 161 aa12.94□□□□□ -0.34
TARDBP-228ENST00000629725 ALG5Q9Y673 324 aa12.94□□□□□ -0.34
TARDBP-228ENST00000629725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-228ENST00000629725 IGKV3D-20A0A0C4DH25 116 aa12.93□□□□□ -0.34
TARDBP-228ENST00000629725 A0A0D9SG52 128 aa12.93□□□□□ -0.34
TARDBP-228ENST00000629725 USP17L23D6RBM5 183 aa12.93□□□□□ -0.34
TARDBP-228ENST00000629725 RHODO00212 210 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms