RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 S100A11P31949 105 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 AKR1C3P42330 323 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 INSL3P51460 131 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 CKS1BP61024 79 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 UBE2BP63146 152 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 PSG9Q00887 426 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 SMIM21Q3B7S5 101 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 BRMS1LQ5PSV4 323 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 LYZL1Q6UWQ5 148 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 LHFPL1Q86WI0 220 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 SIGLECL1Q8N7X8 197 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 LINC00304Q8N9R0 145 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 PFN4Q8NHR9 129 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 TVP23CQ96ET8 276 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 BORCS8Q96FH0 119 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 CARD19Q96LW7 228 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 HIST1H2BLQ99880 126 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 SLC25A21Q9BQT8 299 aaPredicted RBP1.69□□□□□ -2.14
VPS8-228ENST00000628962 GINS4Q9BRT9 223 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 ZNF471Q9BX82 626 aaPredicted RBP1.69□□□□□ -2.14
VPS8-228ENST00000628962 TIMM9Q9Y5J7 89 aa1.69□□□□□ -2.14
VPS8-228ENST00000628962 CCDC88CQ9P219 2028 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 OVOL1O14753 267 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 OR2T1O43869 369 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 TCL1BO95988 128 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 LGALS3P17931 250 aaKnown RBP1.68□□□□□ -2.14
VPS8-228ENST00000628962 FKBP2P26885 142 aaKnown RBP1.68□□□□□ -2.14
VPS8-228ENST00000628962 RNASE4P34096 147 aaKnown RBP1.68□□□□□ -2.14
VPS8-228ENST00000628962 EIF2B2P49770 351 aaKnown RBP1.68□□□□□ -2.14
VPS8-228ENST00000628962 UBA52P62987 128 aaKnown RBP1.68□□□□□ -2.14
VPS8-228ENST00000628962 SUPT4H1P63272 117 aaKnown RBP1.68□□□□□ -2.14
VPS8-228ENST00000628962 FOXF1Q12946 379 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 PABPC1L2AQ5JQF8 200 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 HRCT1Q6UXD1 115 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 SLC35E3Q7Z769 313 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 IFT20Q8IY31 132 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 LYPD1Q8N2G4 141 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 TMEM229BQ8NBD8 167 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 Q8NDZ9 215 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 OR8J3Q8NGG0 315 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 OR4C16Q8NGL9 310 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 C10orf105Q8TEF2 133 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 ZNF418Q8TF45 676 aaPredicted RBP1.68□□□□□ -2.14
VPS8-228ENST00000628962 MRPS24Q96EL2 167 aaKnown RBP1.68□□□□□ -2.14
VPS8-228ENST00000628962 YIPF3Q9GZM5 350 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 TRAPPC2LQ9UL33 140 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 EPDR1Q9UM22 224 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 MPDZO75970 2070 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 FREM1Q5H8C1 2179 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 ANKRD36A6QL64 1941 aa1.68□□□□□ -2.14
VPS8-228ENST00000628962 ZNF407Q9C0G0 2248 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 DNAH7Q8WXX0 4024 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 KIAA1549Q9HCM3 1950 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 IGLV10-54A0A075B6I4 117 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 TRGV10A0A0A0MS01 117 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 TRAV5A0A0B4J249 113 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 TRBV10-2A0A0K0K1G8 114 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 E7EQL1 145 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 GABARAPH6UMI1 98 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 H7C2G1 150 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 NDUFA2O43678 99 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 COX4I1P13073 169 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 DYNLT3P51808 116 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 FXYD2P54710 66 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 DEFB110Q30KQ9 67 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 MORN2Q502X0 79 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 KHDC3LQ587J8 217 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 OR8I2Q8N0Y5 310 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 OR4E2Q8NGC2 313 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 TMEM106AQ96A25 262 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 PFDN5Q99471 154 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 MRPL32Q9BYC8 188 aaKnown RBP1.67□□□□□ -2.14
VPS8-228ENST00000628962 OR2H1Q9GZK4 316 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 TPT1P8Q9HAU6 139 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 OTORQ9NRC9 128 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 COPZ2Q9P299 210 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 PAIP2BQ9ULR5 123 aaKnown RBP1.67□□□□□ -2.14
VPS8-228ENST00000628962 HHLA3Q9XRX5 114 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 CADP27708 2225 aa1.67□□□□□ -2.14
VPS8-228ENST00000628962 PLXNB1O43157 2135 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 ROS1P08922 2347 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 A0A0D9SG52 128 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 C7orf71A4D174 169 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 CST7O76096 145 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 SCTP09683 121 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 FUSP35637 526 aaKnown RBP eCLIP1.66□□□□□ -2.14
VPS8-228ENST00000628962 RHOGP84095 191 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 SPCS2Q15005 226 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 TAF9Q16594 264 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 DEFB121Q5J5C9 76 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 FAM27BQ5VT28 67 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 DPPA3Q6W0C5 159 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 DEFB106AQ8N104 65 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 OR2T10Q8NGZ9 312 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 ADAT1Q9BUB4 502 aaKnown RBP1.66□□□□□ -2.14
VPS8-228ENST00000628962 CACYBPQ9HB71 228 aaKnown RBP1.66□□□□□ -2.14
VPS8-228ENST00000628962 POPDC3Q9HBV1 291 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 NDUFB11Q9NX14 153 aa1.66□□□□□ -2.14
VPS8-228ENST00000628962 NAT8BQ9UHF3 227 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms