RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 SCN2AQ99250 2005 aa6.97□□□□□ -1.29
GABRB3-216ENST00000628124 APRG1Q8IVJ8 170 aa6.96□□□□□ -1.29
GABRB3-216ENST00000628124 CENPVL3A0A0U1RRI6 287 aa6.96□□□□□ -1.3
GABRB3-216ENST00000628124 TMEM89A2RUT3 159 aa6.96□□□□□ -1.3
GABRB3-216ENST00000628124 C11orf86A6NJI1 115 aa6.96□□□□□ -1.3
GABRB3-216ENST00000628124 DEFB113Q30KQ7 82 aa6.96□□□□□ -1.3
GABRB3-216ENST00000628124 Q6ZUT4 128 aa6.96□□□□□ -1.3
GABRB3-216ENST00000628124 RNF144BQ7Z419 303 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 K7EMT4 169 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 PRSS33Q8NF86 280 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 POLR2AP24928 1970 aaKnown RBP6.95□□□□□ -1.3
GABRB3-216ENST00000628124 C16orf54Q6UWD8 224 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 PRO0255Q9UI72 69 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 KLK12Q9UKR0 248 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 TRBV10-1A0A0K0K1A3 114 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 ATP5EP56381 51 aaPredicted RBP6.95□□□□□ -1.3
GABRB3-216ENST00000628124 PRR30Q53SZ7 412 aaPredicted RBP6.95□□□□□ -1.3
GABRB3-216ENST00000628124 ARTNQ5T4W7 220 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 RPL39LQ96EH5 51 aaKnown RBP6.95□□□□□ -1.3
GABRB3-216ENST00000628124 E9PLD3 99 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 SLURP1P55000 103 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 ANKRD39Q53RE8 183 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 C10orf91Q5T1B1 145 aa6.95□□□□□ -1.3
GABRB3-216ENST00000628124 FOXI1Q12951 378 aa6.94□□□□□ -1.3
GABRB3-216ENST00000628124 MIR7-3HGQ8N6C7 128 aa6.94□□□□□ -1.3
GABRB3-216ENST00000628124 DOCK4Q8N1I0 1966 aa6.94□□□□□ -1.3
GABRB3-216ENST00000628124 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
GABRB3-216ENST00000628124 HIGD2AQ9BW72 106 aa6.94□□□□□ -1.3
GABRB3-216ENST00000628124 TUBGCP6Q96RT7 1819 aa6.94□□□□□ -1.3
GABRB3-216ENST00000628124 SDK2Q58EX2 2172 aa6.94□□□□□ -1.3
GABRB3-216ENST00000628124 FHL1Q13642 323 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 TOMM6Q96B49 74 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 AJUBAQ96IF1 538 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 FREM3P0C091 2139 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 CACNA1BQ00975 2339 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 DEFB136Q30KP8 78 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 IGHV4OR15-8A0A075B7B6 117 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 A0A087WW49 117 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 NACAE9PAV3 2078 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 ABCA7Q8IZY2 2146 aa6.93□□□□□ -1.3
GABRB3-216ENST00000628124 CACNA1EQ15878 2313 aa6.92□□□□□ -1.3
GABRB3-216ENST00000628124 K7EN84 100 aa6.92□□□□□ -1.3
GABRB3-216ENST00000628124 GATA1P15976 413 aaPredicted RBP6.92□□□□□ -1.3
GABRB3-216ENST00000628124 C7orf33Q8WU49 177 aa6.92□□□□□ -1.3
GABRB3-216ENST00000628124 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.92□□□□□ -1.3
GABRB3-216ENST00000628124 TMEM263Q8WUH6 116 aaKnown RBP6.92□□□□□ -1.3
GABRB3-216ENST00000628124 SPTAN1Q13813 2472 aaKnown RBP6.91□□□□□ -1.3
GABRB3-216ENST00000628124 NDUFC1O43677 76 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 IGKV2D-26A0A0A0MRZ7 120 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 MPDZO75970 2070 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 NOTCH3Q9UM47 2321 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 WI2-2373I1.2A0A1W2PRP0 233 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 UQCRQO14949 82 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 HIST2H2BDQ6DRA6 164 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 COL11A1P12107 1806 aaPredicted RBP6.91□□□□□ -1.3
GABRB3-216ENST00000628124 WNK2Q9Y3S1 2297 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 ADAMTS7Q9UKP4 1686 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 C2orf70A6NJV1 201 aa6.91□□□□□ -1.3
GABRB3-216ENST00000628124 ZNF706Q9Y5V0 76 aaPredicted RBP6.91□□□□□ -1.3
GABRB3-216ENST00000628124 IGLV11-55A0A075B6I3 123 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 COA6Q5JTJ3 125 aaKnown RBP6.9□□□□□ -1.3
GABRB3-216ENST00000628124 DEFB135Q30KP9 77 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 FAM19A1Q7Z5A9 133 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 DAND5Q8N907 189 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 ATRXP46100 2492 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 TRAV23DV6A0A075B6W5 121 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 IGHV7-81A0A0B4J1V7 117 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 IGKV2-24A0A0C4DH68 120 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 DIAPH2-AS1Q14236 149 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 GTSF1Q8WW33 167 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 CLEC2BQ92478 149 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 ESM1Q9NQ30 184 aa6.9□□□□□ -1.3
GABRB3-216ENST00000628124 Q8N9L7 120 aa6.9□□□□□ -1.31
GABRB3-216ENST00000628124 C4orf3Q8WVX3 66 aa6.9□□□□□ -1.31
GABRB3-216ENST00000628124 WISP1O95388 367 aa6.9□□□□□ -1.31
GABRB3-216ENST00000628124 C20orf197Q8N268 126 aa6.9□□□□□ -1.31
GABRB3-216ENST00000628124 CREBBPQ92793 2442 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 ARFGEF1Q9Y6D6 1849 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 PTPRFP10586 1907 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 I3L2K1 104 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 GBF1Q92538 1859 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 A0A087WZ39 114 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 WFDC2Q14508 124 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 MIAQ16674 131 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 ACACAQ13085 2346 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 LYRM9A8MSI8 78 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 C1orf147Q96MC9 270 aaPredicted RBP6.89□□□□□ -1.31
GABRB3-216ENST00000628124 FXYD2P54710 66 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 C20orf203Q8NBC4 194 aa6.89□□□□□ -1.31
GABRB3-216ENST00000628124 C10orf105Q8TEF2 133 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 COL6A6A6NMZ7 2263 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 H7C423 109 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 CTSGP08311 255 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 SCN5AQ14524 2016 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 TNS1Q9HBL0 1735 aaKnown RBP6.88□□□□□ -1.31
GABRB3-216ENST00000628124 PI4KAP42356 2102 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms