RNA–Protein interactions for RNA: ENST00000624039.1

AC055811.4-201, humanhuman

BASIC

Gene AC055811.4, Length 1,754 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.4-201ENST00000624039 ZNF124Q15973 351 aa11.3□□□□□ -0.6
AC055811.4-201ENST00000624039 VAMP8Q9BV40 100 aa11.3□□□□□ -0.6
AC055811.4-201ENST00000624039 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
AC055811.4-201ENST00000624039 NOTCH3Q9UM47 2321 aa11.29□□□□□ -0.6
AC055811.4-201ENST00000624039 C3orf79P0CE67 100 aa11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 TWIST1Q15672 202 aa11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 PMCHL1Q16048 86 aa11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 ORMDL3Q8N138 153 aa11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 U3KQK5 164 aa11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 F6UB75 175 aa11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 PRB2P02812 416 aaPredicted RBP11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 BTF3P20290 206 aaKnown RBP11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 URB1-AS1Q96HZ7 61 aa11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 NDUFAF3Q9BU61 184 aa11.28□□□□□ -0.6
AC055811.4-201ENST00000624039 PPBPP02775 128 aa11.27□□□□□ -0.61
AC055811.4-201ENST00000624039 CMC4P56277 68 aaPredicted RBP11.27□□□□□ -0.61
AC055811.4-201ENST00000624039 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
AC055811.4-201ENST00000624039 C20orf144Q9BQM9 153 aa11.27□□□□□ -0.61
AC055811.4-201ENST00000624039 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 FA2HQ7L5A8 372 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 AP5S1Q9NUS5 200 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 LAMTOR2Q9Y2Q5 125 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 TRAV21A0A0B4J279 112 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 CACNG7P62955 275 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 EBLN2Q6P2I7 272 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 C19orf73Q9NVV2 129 aa11.26□□□□□ -0.61
AC055811.4-201ENST00000624039 IGKV3D-20A0A0C4DH25 116 aa11.25□□□□□ -0.61
AC055811.4-201ENST00000624039 D6R8Y8 96 aa11.25□□□□□ -0.61
AC055811.4-201ENST00000624039 KPRPQ5T749 579 aaPredicted RBP11.25□□□□□ -0.61
AC055811.4-201ENST00000624039 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
AC055811.4-201ENST00000624039 Q8N976 141 aa11.25□□□□□ -0.61
AC055811.4-201ENST00000624039 PRSS3P2Q8NHM4 247 aa11.25□□□□□ -0.61
AC055811.4-201ENST00000624039 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
AC055811.4-201ENST00000624039 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
AC055811.4-201ENST00000624039 C20orf202A1L168 122 aa11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 MRPL51Q4U2R6 128 aaKnown RBP11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 FOXI2Q6ZQN5 318 aa11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 Q8N1Y9 231 aa11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 C14orf144Q96I85 54 aa11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
AC055811.4-201ENST00000624039 SNAI2O43623 268 aa11.23□□□□□ -0.61
AC055811.4-201ENST00000624039 CKS2P33552 79 aa11.23□□□□□ -0.61
AC055811.4-201ENST00000624039 STHQ8IWL8 128 aa11.23□□□□□ -0.61
AC055811.4-201ENST00000624039 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
AC055811.4-201ENST00000624039 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
AC055811.4-201ENST00000624039 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
AC055811.4-201ENST00000624039 ZFAND2AQ8N6M9 145 aa11.23□□□□□ -0.61
AC055811.4-201ENST00000624039 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
AC055811.4-201ENST00000624039 SORL1Q92673 2214 aa11.22□□□□□ -0.61
AC055811.4-201ENST00000624039 A0A0J9YX75 114 aa11.22□□□□□ -0.61
AC055811.4-201ENST00000624039 MED14OSP0DP75 135 aa11.22□□□□□ -0.61
AC055811.4-201ENST00000624039 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
AC055811.4-201ENST00000624039 PAM16Q9Y3D7 125 aa11.22□□□□□ -0.61
AC055811.4-201ENST00000624039 HLA-DRB4P13762 266 aa11.21□□□□□ -0.61
AC055811.4-201ENST00000624039 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.61
AC055811.4-201ENST00000624039 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
AC055811.4-201ENST00000624039 MAP1LC3CQ9BXW4 147 aa11.21□□□□□ -0.61
AC055811.4-201ENST00000624039 HLA-DRB4X5D2U9 266 aa11.21□□□□□ -0.61
AC055811.4-201ENST00000624039 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.62
AC055811.4-201ENST00000624039 IGHV4-30-4P0DP06 118 aa11.21□□□□□ -0.62
AC055811.4-201ENST00000624039 SSTP61278 116 aa11.21□□□□□ -0.62
AC055811.4-201ENST00000624039 ODF3Q96PU9 254 aa11.21□□□□□ -0.62
AC055811.4-201ENST00000624039 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.62
AC055811.4-201ENST00000624039 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 H3BMM0 161 aa11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 SPATA45Q537H7 98 aa11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 SPANXN1Q5VSR9 72 aa11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 MAP1LC3AQ9H492 121 aa11.2□□□□□ -0.62
AC055811.4-201ENST00000624039 SYS1-DBNDD2H3BUS1 97 aa11.19□□□□□ -0.62
AC055811.4-201ENST00000624039 ASIPP42127 132 aa11.19□□□□□ -0.62
AC055811.4-201ENST00000624039 PRR9Q5T870 116 aa11.19□□□□□ -0.62
AC055811.4-201ENST00000624039 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
AC055811.4-201ENST00000624039 K7EIL1 84 aa11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 IFI27P40305 119 aaPredicted RBP11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 TDRG1Q3Y452 100 aa11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 DEFB121Q5J5C9 76 aa11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 S100A4P26447 101 aaKnown RBP11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 LEPP41159 167 aa11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 FXYD7P58549 80 aa11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 ZNF705AQ6ZN79 300 aaPredicted RBP11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 NXT2Q9NPJ8 142 aaKnown RBP11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 MSRB1Q9NZV6 116 aa11.18□□□□□ -0.62
AC055811.4-201ENST00000624039 DNAH3Q8TD57 4116 aa11.17□□□□□ -0.62
AC055811.4-201ENST00000624039 TRAV9-2A0A087WT02 112 aa11.17□□□□□ -0.62
AC055811.4-201ENST00000624039 RBMY1BA6NDE4 496 aaKnown RBP11.17□□□□□ -0.62
AC055811.4-201ENST00000624039 RBMY1EA6NEQ0 496 aaKnown RBP11.17□□□□□ -0.62
AC055811.4-201ENST00000624039 KLLNB2CW77 178 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms