RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 RHODO00212 210 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 FGF6P10767 208 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 AJUBAQ96IF1 538 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 NDUFA12Q9UI09 145 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 KLF12Q9Y4X4 402 aa12.54□□□□□ -0.4
GABRB3-215ENST00000622697 J3QQQ9 107 aa12.53□□□□□ -0.4
GABRB3-215ENST00000622697 LINC00322Q6ZN03 302 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-215ENST00000622697 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
GABRB3-215ENST00000622697 WI2-2373I1.2A0A1W2PRP0 233 aa12.53□□□□□ -0.4
GABRB3-215ENST00000622697 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
GABRB3-215ENST00000622697 IGF2-ASQ6U949 168 aa12.53□□□□□ -0.4
GABRB3-215ENST00000622697 ACACBO00763 2458 aa12.52□□□□□ -0.4
GABRB3-215ENST00000622697 RBAKDNA6NC62 111 aa12.52□□□□□ -0.4
GABRB3-215ENST00000622697 HOXD3P31249 432 aaPredicted RBP12.52□□□□□ -0.4
GABRB3-215ENST00000622697 GAGE6Q13070 117 aa12.52□□□□□ -0.4
GABRB3-215ENST00000622697 Q8NA96 180 aa12.52□□□□□ -0.4
GABRB3-215ENST00000622697 NACAE9PAV3 2078 aa12.52□□□□□ -0.4
GABRB3-215ENST00000622697 CUL9Q8IWT3 2517 aa12.52□□□□□ -0.41
GABRB3-215ENST00000622697 CGB3P0DN86 165 aa12.52□□□□□ -0.41
GABRB3-215ENST00000622697 CGB7P0DN87 165 aa12.52□□□□□ -0.41
GABRB3-215ENST00000622697 LINC01545Q5VT33 79 aa12.52□□□□□ -0.41
GABRB3-215ENST00000622697 DEFB125Q8N687 156 aa12.52□□□□□ -0.41
GABRB3-215ENST00000622697 SCRT2Q9NQ03 307 aa12.51□□□□□ -0.41
GABRB3-215ENST00000622697 A0A096LPF7 62 aa12.51□□□□□ -0.41
GABRB3-215ENST00000622697 HIST1H4AP62805 103 aaKnown RBP12.51□□□□□ -0.41
GABRB3-215ENST00000622697 TRBV25-1A0A075B6N4 114 aa12.5□□□□□ -0.41
GABRB3-215ENST00000622697 IGLV2-8P01709 118 aa12.5□□□□□ -0.41
GABRB3-215ENST00000622697 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
GABRB3-215ENST00000622697 MRPL53Q96EL3 112 aaKnown RBP12.5□□□□□ -0.41
GABRB3-215ENST00000622697 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-215ENST00000622697 IGKV2-29A2NJV5 120 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-215ENST00000622697 GAGE2AQ6NT46 116 aa12.5□□□□□ -0.41
GABRB3-215ENST00000622697 EIF4EBP1Q13541 118 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-215ENST00000622697 PRO1854Q9UHT4 67 aa12.5□□□□□ -0.41
GABRB3-215ENST00000622697 PIEZO2Q9H5I5 2752 aa12.5□□□□□ -0.41
GABRB3-215ENST00000622697 SIVA1O15304 175 aa12.5□□□□□ -0.41
GABRB3-215ENST00000622697 CSPG4Q6UVK1 2322 aa12.5□□□□□ -0.41
GABRB3-215ENST00000622697 SLURP1P55000 103 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 C5orf56Q8N8D9 126 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 LAMTOR3Q9UHA4 124 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 F8W1H4 67 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 INS-IGF2F8WCM5 200 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 SS18Q15532 418 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 FANCD2OSQ96PS1 177 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 PRB1P04280 392 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 GDF5OSQ5U4N7 250 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 CRYGCP07315 174 aa12.49□□□□□ -0.41
GABRB3-215ENST00000622697 PLXNB1O43157 2135 aa12.48□□□□□ -0.41
GABRB3-215ENST00000622697 SUMO4Q6EEV6 95 aa12.48□□□□□ -0.41
GABRB3-215ENST00000622697 ATP6V0BQ99437 205 aa12.48□□□□□ -0.41
GABRB3-215ENST00000622697 ELANEP08246 267 aa12.48□□□□□ -0.41
GABRB3-215ENST00000622697 NXPH4O95158 308 aa12.47□□□□□ -0.41
GABRB3-215ENST00000622697 LOXL1Q08397 574 aaPredicted RBP12.47□□□□□ -0.41
GABRB3-215ENST00000622697 C16orf54Q6UWD8 224 aa12.47□□□□□ -0.41
GABRB3-215ENST00000622697 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
GABRB3-215ENST00000622697 H3BUA1 57 aa12.47□□□□□ -0.41
GABRB3-215ENST00000622697 TRBV12-3P01733 135 aa12.47□□□□□ -0.41
GABRB3-215ENST00000622697 TRBV20-1A0A075B6N2 111 aa12.47□□□□□ -0.41
GABRB3-215ENST00000622697 CLPSL2Q6UWE3 100 aa12.47□□□□□ -0.41
GABRB3-215ENST00000622697 VPREB3Q9UKI3 123 aa12.47□□□□□ -0.41
GABRB3-215ENST00000622697 TANC2Q9HCD6 1990 aa12.46□□□□□ -0.41
GABRB3-215ENST00000622697 H3BMM0 161 aa12.46□□□□□ -0.41
GABRB3-215ENST00000622697 LGALS1P09382 135 aaKnown RBP12.46□□□□□ -0.41
GABRB3-215ENST00000622697 FOXI2Q6ZQN5 318 aa12.46□□□□□ -0.41
GABRB3-215ENST00000622697 UBE2WQ96B02 151 aa12.46□□□□□ -0.41
GABRB3-215ENST00000622697 TMEM243Q9BU79 118 aa12.46□□□□□ -0.41
GABRB3-215ENST00000622697 U3KQE9 123 aa12.46□□□□□ -0.41
GABRB3-215ENST00000622697 TP73-AS1Q9UF72 201 aa12.46□□□□□ -0.41
GABRB3-215ENST00000622697 LINC01548A6NM66 108 aa12.46□□□□□ -0.42
GABRB3-215ENST00000622697 J3QLI3 93 aa12.46□□□□□ -0.42
GABRB3-215ENST00000622697 RPL39P62891 51 aaKnown RBP12.46□□□□□ -0.42
GABRB3-215ENST00000622697 LENEPQ9Y5L5 61 aa12.46□□□□□ -0.42
GABRB3-215ENST00000622697 F5H768 121 aa12.45□□□□□ -0.42
GABRB3-215ENST00000622697 UNQ9165/PRO28630Q6UXU0 137 aa12.45□□□□□ -0.42
GABRB3-215ENST00000622697 TAL2Q16559 108 aa12.45□□□□□ -0.42
GABRB3-215ENST00000622697 NOP10Q9NPE3 64 aaKnown RBP12.45□□□□□ -0.42
GABRB3-215ENST00000622697 ZNF80P51504 273 aaPredicted RBP12.45□□□□□ -0.42
GABRB3-215ENST00000622697 FXYD2P54710 66 aa12.44□□□□□ -0.42
GABRB3-215ENST00000622697 SH2D6Q7Z4S9 175 aa12.44□□□□□ -0.42
GABRB3-215ENST00000622697 PPDPFLQ8WWR9 84 aa12.44□□□□□ -0.42
GABRB3-215ENST00000622697 NOTCH2Q04721 2471 aa12.44□□□□□ -0.42
GABRB3-215ENST00000622697 YPEL4Q96NS1 127 aa12.44□□□□□ -0.42
GABRB3-215ENST00000622697 OTOGLQ3ZCN5 2332 aa12.43□□□□□ -0.42
GABRB3-215ENST00000622697 KIAA1549Q9HCM3 1950 aa12.43□□□□□ -0.42
GABRB3-215ENST00000622697 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
GABRB3-215ENST00000622697 CEP350Q5VT06 3117 aa12.43□□□□□ -0.42
GABRB3-215ENST00000622697 GAGE12HA6NDE8 117 aa12.43□□□□□ -0.42
GABRB3-215ENST00000622697 C2orf70A6NJV1 201 aa12.42□□□□□ -0.42
GABRB3-215ENST00000622697 DAZAP2Q15038 168 aaPredicted RBP12.42□□□□□ -0.42
GABRB3-215ENST00000622697 ZFP2Q6ZN57 461 aa12.42□□□□□ -0.42
GABRB3-215ENST00000622697 DEFB121Q5J5C9 76 aa12.42□□□□□ -0.42
GABRB3-215ENST00000622697 RNASE8Q8TDE3 154 aaKnown RBP12.42□□□□□ -0.42
GABRB3-215ENST00000622697 SIRPDQ9H106 197 aa12.42□□□□□ -0.42
GABRB3-215ENST00000622697 PCNTO95613 3336 aa12.42□□□□□ -0.42
GABRB3-215ENST00000622697 A0A0J9YXV3 536 aa12.42□□□□□ -0.42
GABRB3-215ENST00000622697 ZNF48Q96MX3 618 aaPredicted RBP12.42□□□□□ -0.42
GABRB3-215ENST00000622697 LINC00574Q9H8X3 128 aa12.42□□□□□ -0.42
GABRB3-215ENST00000622697 CACNA1AO00555 2505 aa12.41□□□□□ -0.42
GABRB3-215ENST00000622697 TAX1BP3O14907 124 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms