RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 UBE2D1P51668 147 aa9.97□□□□□ -0.81
CHD1L-210ENST00000622533 UBE2D3P61077 147 aa9.97□□□□□ -0.81
CHD1L-210ENST00000622533 UBE2D2P62837 147 aa9.97□□□□□ -0.81
CHD1L-210ENST00000622533 AJUBAQ96IF1 538 aa9.97□□□□□ -0.81
CHD1L-210ENST00000622533 CACNA1AO00555 2505 aa9.97□□□□□ -0.81
CHD1L-210ENST00000622533 DEFB104AQ8WTQ1 72 aa9.97□□□□□ -0.81
CHD1L-210ENST00000622533 PIEZO1Q92508 2521 aa9.97□□□□□ -0.81
CHD1L-210ENST00000622533 A8MWV9 139 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 LINC01619G3V211 115 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 ZFHX3Q15911 3703 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 A6NJY4 79 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 CCDC179H3BU77 68 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 EMP1P54849 157 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 C15orf32Q32M92 178 aa9.96□□□□□ -0.81
CHD1L-210ENST00000622533 SCGB1C2P0DMR2 95 aa9.96□□□□□ -0.82
CHD1L-210ENST00000622533 HERV-K104P63124 156 aa9.96□□□□□ -0.82
CHD1L-210ENST00000622533 Q8N9W7 124 aa9.96□□□□□ -0.82
CHD1L-210ENST00000622533 CD7P09564 240 aa9.95□□□□□ -0.82
CHD1L-210ENST00000622533 TCF15Q12870 199 aa9.95□□□□□ -0.82
CHD1L-210ENST00000622533 NDUFA11Q86Y39 141 aa9.95□□□□□ -0.82
CHD1L-210ENST00000622533 CRLF1O75462 422 aa9.95□□□□□ -0.82
CHD1L-210ENST00000622533 IGHV4-4A0A075B6R2 117 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 IGHV3-66A0A0C4DH42 116 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 NEXN-AS1Q8NBZ9 246 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 RASL10AQ92737 203 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 CITED1Q99966 193 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 MSRB2Q9Y3D2 182 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 TRAV12-1A0A0B4J245 112 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 TRAV4A0A0B4J268 109 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 CLEC3BP05452 202 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 CRIP2P52943 208 aaPredicted RBP9.94□□□□□ -0.82
CHD1L-210ENST00000622533 FOXC1Q12948 553 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 SPANXN1Q5VSR9 72 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 METTL26Q96S19 204 aa9.94□□□□□ -0.82
CHD1L-210ENST00000622533 TRAV8-2A0A0B4J237 113 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 TRBV7-9A0A0J9YWB2 115 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 C11orf71Q6IPW1 123 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 EEF1AKMT3Q96AZ1 226 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 AGPAT4-IT1Q9H0P7 198 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 IGHV3OR16-13A0A075B7E8 117 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 TRBV7-1A0A0A6YYK4 115 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 IGHV3-74A0A0B4J1X5 117 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 K7ENP7 123 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 LY6HO94772 140 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 C9orf47Q6ZRZ4 202 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 Q6ZS46 218 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 BAALCQ8WXS3 180 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 SMIM2Q9BVW6 85 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 ARHGAP32A7KAX9 2087 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
CHD1L-210ENST00000622533 TRPT1Q86TN4 253 aaKnown RBP9.93□□□□□ -0.82
CHD1L-210ENST00000622533 RPL39LQ96EH5 51 aaKnown RBP9.93□□□□□ -0.82
CHD1L-210ENST00000622533 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 CFC1P0CG37 223 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 NDUFV3P56181 108 aaKnown RBP9.92□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 RAX2Q96IS3 184 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 LENEPQ9Y5L5 61 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 C9JAW5 83 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 H7C2G1 150 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 COX6B1P14854 86 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 GRNP28799 593 aaKnown RBP9.92□□□□□ -0.82
CHD1L-210ENST00000622533 ECSCRQ19T08 205 aa9.92□□□□□ -0.82
CHD1L-210ENST00000622533 ANKHD1Q8IWZ3 2542 aaKnown RBP9.91□□□□□ -0.82
CHD1L-210ENST00000622533 J3KRW8 73 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 UBE2E1P51965 193 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 SIRPDQ9H106 197 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 CLPSL1A2RUU4 121 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 RHODO00212 210 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 CCL21O00585 134 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 TOMM6Q96B49 74 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 ITPR1Q14643 2758 aa9.91□□□□□ -0.82
CHD1L-210ENST00000622533 TMEM262E9PQX1 116 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 SLC25A20O43772 301 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 LYRM7Q5U5X0 104 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 C2orf66Q6UXQ4 117 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE12JA6NER3 117 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 ATP6V0E1O15342 81 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 SNCGO76070 127 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE7O76087 117 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE12FP0CL80 117 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE12GP0CL81 117 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE12IP0CL82 117 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 SRD5A1P18405 259 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 GAGE4Q13068 117 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 ORMDL2Q53FV1 153 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 CLEC19AQ6UXS0 136 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 VCX2Q9H322 139 aa9.9□□□□□ -0.82
CHD1L-210ENST00000622533 A0A0J9YY99 117 aa9.89□□□□□ -0.83
CHD1L-210ENST00000622533 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
CHD1L-210ENST00000622533 CCDC140Q96MF4 163 aa9.89□□□□□ -0.83
CHD1L-210ENST00000622533 IGHV3-49A0A0A0MS15 119 aa9.89□□□□□ -0.83
CHD1L-210ENST00000622533 M0R381 172 aa9.89□□□□□ -0.83
CHD1L-210ENST00000622533 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms