RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 NUP35Q8NFH5 326 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 KCNS1Q96KK3 526 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 MIEN1Q9BRT3 115 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 DNAH6Q9C0G6 4158 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 ZNF705FA8MVS1 300 aaPredicted RBP5.58□□□□□ -1.52
CLK1-215ENST00000621181 ZNF324O75467 553 aaPredicted RBP5.58□□□□□ -1.52
CLK1-215ENST00000621181 TOMM40O96008 361 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 IGKV1-17P01599 117 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 APCSP02743 223 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 ZNF705DP0CH99 300 aaPredicted RBP5.58□□□□□ -1.52
CLK1-215ENST00000621181 ZNF705BP0CI00 300 aaPredicted RBP5.58□□□□□ -1.52
CLK1-215ENST00000621181 MGST1P10620 155 aaKnown RBP5.58□□□□□ -1.52
CLK1-215ENST00000621181 SRIP30626 198 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 GNG5P63218 68 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 RPL19P84098 196 aaKnown RBP5.58□□□□□ -1.52
CLK1-215ENST00000621181 MAPKAPK5-AS1Q8N8E1 139 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 C18orf32Q8TCD1 76 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 TSKUQ8WUA8 353 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 NRN1Q9NPD7 142 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 ZNF492Q9P255 531 aa5.58□□□□□ -1.52
CLK1-215ENST00000621181 TRAV30A0A087WSZ9 112 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 TRBV6-1A0A0K0K1D8 114 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 TEX48A0A1B0GUV7 120 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 SMIM9A6NGZ8 99 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 NPIPB6E9PJ23 425 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 H3BMM0 161 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 M0R143 59 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 HYPMO75409 117 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 LTAP01374 205 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 NBEAP1P0C6P0 100 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 IGLC1P0CG04 106 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 CT83Q5H943 113 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 FAM222AQ5U5X8 452 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 ZNF705AQ6ZN79 300 aaPredicted RBP5.57□□□□□ -1.52
CLK1-215ENST00000621181 ATP5L2Q7Z4Y8 100 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 GLMPQ8WWB7 406 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 GPR82Q96P67 336 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 ALKBH7Q9BT30 221 aaPredicted RBP5.57□□□□□ -1.52
CLK1-215ENST00000621181 TMEM14CQ9P0S9 112 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 NACAE9PAV3 2078 aa5.57□□□□□ -1.52
CLK1-215ENST00000621181 PGPA6NDG6 321 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 ZNF253O75346 499 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 CDK2AP2O75956 126 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 IGKV3-20P01619 116 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 IGLV2-11P01706 119 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 HLA-DRB4P13762 266 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 USF2Q15853 346 aaPredicted RBP5.56□□□□□ -1.52
CLK1-215ENST00000621181 C5orf17Q8NAS9 161 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 OR1B1Q8NGR6 318 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 GTSF1Q8WW33 167 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 URB1-AS1Q96HZ7 61 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 ATG101Q9BSB4 218 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 SAMD10Q9BYL1 202 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 ZNF331Q9NQX6 463 aaPredicted RBP5.56□□□□□ -1.52
CLK1-215ENST00000621181 ZNF586Q9NXT0 402 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 DKK2Q9UBU2 259 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 HLA-DRB4X5D2U9 266 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 FAT2Q9NYQ8 4349 aa5.56□□□□□ -1.52
CLK1-215ENST00000621181 HIGD1CA8MV81 97 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 TCRAP04437 139 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 IL4P05112 153 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 SLC25A5P05141 298 aaKnown RBP5.55□□□□□ -1.52
CLK1-215ENST00000621181 C3orf79P0CE67 100 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 HIST1H1EP10412 219 aaKnown RBP5.55□□□□□ -1.52
CLK1-215ENST00000621181 ORM2P19652 201 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 FXYD7P58549 80 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 SIGLEC15Q6ZMC9 328 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 U3KQE9 123 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 DIRC3C9JPN6 131 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 MRPS12O15235 138 aaKnown RBP5.55□□□□□ -1.52
CLK1-215ENST00000621181 TCAPO15273 167 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 PSG1P11464 419 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 AMTP48728 403 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 OR4B1Q8NGF8 309 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 FMC1Q96HJ9 113 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 VAMP8Q9BV40 100 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 GFRA4Q9GZZ7 299 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 Q9H3A6 140 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 OTORQ9NRC9 128 aa5.55□□□□□ -1.52
CLK1-215ENST00000621181 FAM231BA6NCW3 169 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 BUB3O43684 328 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 FOXA3P55318 350 aaPredicted RBP5.54□□□□□ -1.52
CLK1-215ENST00000621181 KRTDAPP60985 99 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 DAD1P61803 113 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 FAM19A2Q8N3H0 131 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 BLNKQ8WV28 456 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 SLC25A39Q9BZJ4 359 aaPredicted RBP5.54□□□□□ -1.52
CLK1-215ENST00000621181 RPP21Q9H633 154 aaKnown RBP5.54□□□□□ -1.52
CLK1-215ENST00000621181 HIGD1AQ9Y241 93 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 PAM16Q9Y3D7 125 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 GOLT1BQ9Y3E0 138 aa5.54□□□□□ -1.52
CLK1-215ENST00000621181 IGLC2P0DOY2 106 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 IGLC3P0DOY3 106 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 PMCHP20382 165 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 DEFB1P60022 68 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 UBE2G1P62253 170 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 EBLN2Q6P2I7 272 aa5.53□□□□□ -1.52
CLK1-215ENST00000621181 Q86TA4 180 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms