RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 C18orf32Q8TCD1 76 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 MS4A6AQ9H2W1 248 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.51□□□□□ -1.21
VTA1-205ENST00000620996 K7EMT4 169 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 HSBP1O75506 76 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 RPS20P60866 119 aaKnown RBP7.51□□□□□ -1.21
VTA1-205ENST00000620996 Q0VG73 95 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 Q6AWC8 147 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 JMJD8Q96S16 334 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 NF1P21359 2839 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 B5MCH6 92 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 ZNF324O75467 553 aaPredicted RBP7.51□□□□□ -1.21
VTA1-205ENST00000620996 OR10J3Q5JRS4 329 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 KCNS1Q96KK3 526 aa7.51□□□□□ -1.21
VTA1-205ENST00000620996 KRTAP1-1Q07627 177 aa7.5□□□□□ -1.21
VTA1-205ENST00000620996 TCTEX1D4Q5JR98 221 aa7.5□□□□□ -1.21
VTA1-205ENST00000620996 C9orf47Q6ZRZ4 202 aa7.5□□□□□ -1.21
VTA1-205ENST00000620996 OR8A1Q8NGG7 326 aa7.5□□□□□ -1.21
VTA1-205ENST00000620996 M0R2Z0 102 aa7.5□□□□□ -1.21
VTA1-205ENST00000620996 SOCS3O14543 225 aa7.5□□□□□ -1.21
VTA1-205ENST00000620996 PRR9Q5T870 116 aa7.5□□□□□ -1.21
VTA1-205ENST00000620996 HIVEP2P31629 2446 aa7.5□□□□□ -1.21
VTA1-205ENST00000620996 C2orf70A6NJV1 201 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 LINC01619G3V211 115 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 SNRPD3P62318 126 aaKnown RBP7.49□□□□□ -1.21
VTA1-205ENST00000620996 AMN1Q8IY45 258 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 TMEM86BQ8N661 226 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 DYNLRB2Q8TF09 96 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 SPRY2O43597 315 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 S100A4P26447 101 aaKnown RBP7.49□□□□□ -1.21
VTA1-205ENST00000620996 KIR3DS1Q14943 382 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 SLC25A34Q6PIV7 304 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 OR2K2Q8NGT1 345 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 ZNF418Q8TF45 676 aaPredicted RBP7.49□□□□□ -1.21
VTA1-205ENST00000620996 LINC00477Q96M19 166 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 MSRB1Q9NZV6 116 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 LOC389332A0A1B0GUA5 103 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 C12orf54Q6X4T0 127 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 SPATA12Q7Z6I5 190 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 RNF183Q96D59 192 aa7.49□□□□□ -1.21
VTA1-205ENST00000620996 IGKV3D-20A0A0C4DH25 116 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 TRBV7-9A0A0J9YWB2 115 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 OR4C46A6NHA9 309 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 H3BVH4 76 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 SRSF2Q01130 221 aaKnown RBP7.48□□□□□ -1.21
VTA1-205ENST00000620996 SPCS1Q9Y6A9 102 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 SMKR1H3BMG3 65 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 EBLN2Q6P2I7 272 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 Q8N2B8 174 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 PGPEP1Q9NXJ5 209 aa7.48□□□□□ -1.21
VTA1-205ENST00000620996 NCR2O95944 276 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 CD28P10747 220 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 SPANXN1Q5VSR9 72 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 OR10AG1Q8NH19 301 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 MYOZ3Q8TDC0 251 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 DCANP1Q8TF63 244 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 D6R8Y8 96 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 LINC01559Q495D7 138 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 COX8CQ7Z4L0 72 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 WNK1Q9H4A3 2382 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 TRAV21A0A0B4J279 112 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 C4orf3Q8WVX3 66 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 DLX4Q92988 240 aaPredicted RBP7.47□□□□□ -1.21
VTA1-205ENST00000620996 PEMTQ9UBM1 199 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 AKAP9Q99996 3911 aa7.47□□□□□ -1.21
VTA1-205ENST00000620996 TRAV12-2A0A075B6T6 113 aa7.46□□□□□ -1.21
VTA1-205ENST00000620996 M0R381 172 aa7.46□□□□□ -1.21
VTA1-205ENST00000620996 CKS2P33552 79 aa7.46□□□□□ -1.21
VTA1-205ENST00000620996 CD300EQ496F6 205 aaPredicted RBP7.46□□□□□ -1.21
VTA1-205ENST00000620996 PRSS3P2Q8NHM4 247 aa7.46□□□□□ -1.21
VTA1-205ENST00000620996 MRAP2Q96G30 205 aa7.46□□□□□ -1.21
VTA1-205ENST00000620996 SORL1Q92673 2214 aa7.46□□□□□ -1.21
VTA1-205ENST00000620996 CUBNO60494 3623 aa7.46□□□□□ -1.21
VTA1-205ENST00000620996 TRAV12-3A0A0B4J271 114 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 LY6G6DO95868 133 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 FXYD7P58549 80 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 KLF5Q13887 457 aaPredicted RBP7.46□□□□□ -1.22
VTA1-205ENST00000620996 SH2D6Q7Z4S9 175 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 ZFAND2AQ8N6M9 145 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 LGALS9O00182 355 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 IGLC6P0CF74 106 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 LINC00173Q6ZV60 143 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 NEGR1Q7Z3B1 354 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 RNF152Q8N8N0 203 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 OR9G4Q8NGQ1 327 aa7.46□□□□□ -1.22
VTA1-205ENST00000620996 CITED2Q99967 270 aaPredicted RBP7.46□□□□□ -1.22
VTA1-205ENST00000620996 ADAMTSL5Q6ZMM2 481 aa7.45□□□□□ -1.22
VTA1-205ENST00000620996 FA2HQ7L5A8 372 aa7.45□□□□□ -1.22
VTA1-205ENST00000620996 PRELID3AQ96N28 172 aa7.45□□□□□ -1.22
VTA1-205ENST00000620996 HTN1P15515 57 aa7.45□□□□□ -1.22
VTA1-205ENST00000620996 NSUN5P1Q3KNT7 163 aa7.45□□□□□ -1.22
VTA1-205ENST00000620996 FAM104BQ5XKR9 115 aa7.45□□□□□ -1.22
VTA1-205ENST00000620996 KNCNA6PVL3 124 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 K7EP34 96 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 K7EQG2 157 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 GNRH2O43555 120 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 ASIPP42127 132 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 DEFB131AP59861 70 aa7.44□□□□□ -1.22
VTA1-205ENST00000620996 SPINK13Q1W4C9 94 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms