RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 KIR2DL5BA0A0G2JPC4 375 aa14.15□□□□□ -0.14
PSPC1-206ENST00000619300 KIR2DL5AQ8N109 375 aa14.15□□□□□ -0.14
PSPC1-206ENST00000619300 NOTCH2Q04721 2471 aa14.15□□□□□ -0.14
PSPC1-206ENST00000619300 GAS8-AS1O95177 125 aa14.15□□□□□ -0.14
PSPC1-206ENST00000619300 DEFB131AP59861 70 aa14.15□□□□□ -0.14
PSPC1-206ENST00000619300 JMJD8Q96S16 334 aa14.15□□□□□ -0.14
PSPC1-206ENST00000619300 HIVEP2P31629 2446 aa14.15□□□□□ -0.14
PSPC1-206ENST00000619300 CUBNO60494 3623 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 M0R381 172 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 NDUFA7O95182 113 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 AMTNQ6UX39 209 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 TRAV12-2A0A075B6T6 113 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 SPRY2O43597 315 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 TNFRSF6BO95407 300 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 SPINK13Q1W4C9 94 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 TMEM70Q9BUB7 260 aa14.14□□□□□ -0.15
PSPC1-206ENST00000619300 KNCNA6PVL3 124 aa14.13□□□□□ -0.15
PSPC1-206ENST00000619300 CD300EQ496F6 205 aaPredicted RBP14.13□□□□□ -0.15
PSPC1-206ENST00000619300 LINC00173Q6ZV60 143 aa14.13□□□□□ -0.15
PSPC1-206ENST00000619300 MAP1LC3AQ9H492 121 aa14.13□□□□□ -0.15
PSPC1-206ENST00000619300 HSPB8Q9UJY1 196 aa14.13□□□□□ -0.15
PSPC1-206ENST00000619300 NUTF2P61970 127 aaKnown RBP14.12□□□□□ -0.15
PSPC1-206ENST00000619300 VAMP8Q9BV40 100 aa14.12□□□□□ -0.15
PSPC1-206ENST00000619300 GATA1P15976 413 aaPredicted RBP14.12□□□□□ -0.15
PSPC1-206ENST00000619300 SORL1Q92673 2214 aa14.11□□□□□ -0.15
PSPC1-206ENST00000619300 CRXO43186 299 aaPredicted RBP14.11□□□□□ -0.15
PSPC1-206ENST00000619300 CD7P09564 240 aa14.11□□□□□ -0.15
PSPC1-206ENST00000619300 HLA-DRB4P13762 266 aa14.11□□□□□ -0.15
PSPC1-206ENST00000619300 OR2K2Q8NGT1 345 aa14.11□□□□□ -0.15
PSPC1-206ENST00000619300 HLA-DRB4X5D2U9 266 aa14.11□□□□□ -0.15
PSPC1-206ENST00000619300 A8MTW9 85 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 H3BMM0 161 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 SPAG8Q99932 426 aaPredicted RBP14.1□□□□□ -0.15
PSPC1-206ENST00000619300 OTOGQ6ZRI0 2925 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 TRAV25A0A0B4J276 109 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 OR4C46A6NHA9 309 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 SYS1-DBNDD2H3BUS1 97 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 NXPH4O95158 308 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 MAP1LC3CQ9BXW4 147 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 PAM16Q9Y3D7 125 aa14.1□□□□□ -0.15
PSPC1-206ENST00000619300 PROK1P58294 105 aa14.09□□□□□ -0.15
PSPC1-206ENST00000619300 MRAP2Q96G30 205 aa14.09□□□□□ -0.15
PSPC1-206ENST00000619300 DPH3P1Q9H4G8 78 aa14.09□□□□□ -0.15
PSPC1-206ENST00000619300 MAP6D1Q9H9H5 199 aa14.09□□□□□ -0.15
PSPC1-206ENST00000619300 ZNF256Q9Y2P7 627 aaPredicted RBP14.09□□□□□ -0.15
PSPC1-206ENST00000619300 A0A096LNJ9 63 aa14.08□□□□□ -0.15
PSPC1-206ENST00000619300 TRAV26-2A0A0B4J265 109 aa14.08□□□□□ -0.15
PSPC1-206ENST00000619300 LINC01546A6NGU7 62 aa14.08□□□□□ -0.15
PSPC1-206ENST00000619300 SPATA12Q7Z6I5 190 aa14.08□□□□□ -0.15
PSPC1-206ENST00000619300 C14orf178Q8N769 122 aaPredicted RBP14.08□□□□□ -0.15
PSPC1-206ENST00000619300 NRACQ8N912 160 aa14.08□□□□□ -0.15
PSPC1-206ENST00000619300 C20orf144Q9BQM9 153 aa14.08□□□□□ -0.15
PSPC1-206ENST00000619300 NXT2Q9NPJ8 142 aaKnown RBP14.08□□□□□ -0.15
PSPC1-206ENST00000619300 AGRNO00468 2067 aa14.08□□□□□ -0.16
PSPC1-206ENST00000619300 IGHV1OR15-1A0A075B7D0 117 aa14.08□□□□□ -0.16
PSPC1-206ENST00000619300 M0R143 59 aa14.08□□□□□ -0.16
PSPC1-206ENST00000619300 ZNF747Q9BV97 191 aa14.08□□□□□ -0.16
PSPC1-206ENST00000619300 IGHV3-16A0A0C4DH30 117 aa14.07□□□□□ -0.16
PSPC1-206ENST00000619300 PRSS47A8MTI9 375 aa14.07□□□□□ -0.16
PSPC1-206ENST00000619300 ZNF124Q15973 351 aa14.07□□□□□ -0.16
PSPC1-206ENST00000619300 DEFB125Q8N687 156 aa14.07□□□□□ -0.16
PSPC1-206ENST00000619300 AP1S3Q96PC3 154 aa14.07□□□□□ -0.16
PSPC1-206ENST00000619300 EREGO14944 169 aa14.07□□□□□ -0.16
PSPC1-206ENST00000619300 TCAPO15273 167 aa14.07□□□□□ -0.16
PSPC1-206ENST00000619300 Q8N1Y9 231 aa14.07□□□□□ -0.16
PSPC1-206ENST00000619300 FXYD7P58549 80 aa14.06□□□□□ -0.16
PSPC1-206ENST00000619300 PET117Q6UWS5 81 aa14.06□□□□□ -0.16
PSPC1-206ENST00000619300 C9orf85Q96MD7 179 aa14.06□□□□□ -0.16
PSPC1-206ENST00000619300 MDFICQ9P1T7 246 aa14.06□□□□□ -0.16
PSPC1-206ENST00000619300 SETD2Q9BYW2 2564 aaPredicted RBP14.05□□□□□ -0.16
PSPC1-206ENST00000619300 INAFM1C9JVW0 142 aa14.05□□□□□ -0.16
PSPC1-206ENST00000619300 HBDP02042 147 aa14.05□□□□□ -0.16
PSPC1-206ENST00000619300 ATOH7Q8N100 152 aa14.05□□□□□ -0.16
PSPC1-206ENST00000619300 Q8N8P6 123 aa14.05□□□□□ -0.16
PSPC1-206ENST00000619300 SNHG12Q9BXW3 62 aa14.05□□□□□ -0.16
PSPC1-206ENST00000619300 RBMY1BA6NDE4 496 aaKnown RBP14.05□□□□□ -0.16
PSPC1-206ENST00000619300 RBMY1EA6NEQ0 496 aaKnown RBP14.05□□□□□ -0.16
PSPC1-206ENST00000619300 ADARB2-AS1A8MUL3 147 aa14.05□□□□□ -0.16
PSPC1-206ENST00000619300 RBMY1DP0C7P1 496 aaKnown RBP14.05□□□□□ -0.16
PSPC1-206ENST00000619300 IGLV2-18A0A075B6J9 118 aa14.04□□□□□ -0.16
PSPC1-206ENST00000619300 C20orf202A1L168 122 aa14.04□□□□□ -0.16
PSPC1-206ENST00000619300 SPATA45Q537H7 98 aa14.03□□□□□ -0.16
PSPC1-206ENST00000619300 POM121L12Q8N7R1 296 aa14.03□□□□□ -0.16
PSPC1-206ENST00000619300 KIF25-AS1Q9Y6Z4 181 aa14.03□□□□□ -0.16
PSPC1-206ENST00000619300 NSUN5P1Q3KNT7 163 aa14.03□□□□□ -0.16
PSPC1-206ENST00000619300 TRAV9-2A0A087WT02 112 aa14.02□□□□□ -0.16
PSPC1-206ENST00000619300 MGPP08493 103 aa14.02□□□□□ -0.16
PSPC1-206ENST00000619300 RBMY1A1P0DJD3 496 aaKnown RBP14.02□□□□□ -0.16
PSPC1-206ENST00000619300 RBMY1CP0DJD4 496 aa14.02□□□□□ -0.16
PSPC1-206ENST00000619300 SMIM17P0DL12 118 aa14.02□□□□□ -0.16
PSPC1-206ENST00000619300 RBMY1FQ15415 496 aaKnown RBP14.02□□□□□ -0.16
PSPC1-206ENST00000619300 ZNF705AQ6ZN79 300 aaPredicted RBP14.02□□□□□ -0.16
PSPC1-206ENST00000619300 RASL10AQ92737 203 aa14.02□□□□□ -0.16
PSPC1-206ENST00000619300 MUC4Q99102 2169 aa14.02□□□□□ -0.17
PSPC1-206ENST00000619300 TRGV11A0A075B6L2 103 aa14.02□□□□□ -0.17
PSPC1-206ENST00000619300 FCER1GP30273 86 aa14.02□□□□□ -0.17
PSPC1-206ENST00000619300 LINC00315P59091 139 aa14.02□□□□□ -0.17
PSPC1-206ENST00000619300 ODF3L2Q3SX64 289 aa14.02□□□□□ -0.17
PSPC1-206ENST00000619300 MAJINQ3KP22 176 aa14.01□□□□□ -0.17
PSPC1-206ENST00000619300 SYT8Q8NBV8 401 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms