RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ADAMTSL5Q6ZMM2 481 aa13.15□□□□□ -0.3
CNOT3-209ENST00000617930 UFC1Q9Y3C8 167 aa13.15□□□□□ -0.3
CNOT3-209ENST00000617930 J3KRW8 73 aa13.14□□□□□ -0.31
CNOT3-209ENST00000617930 HOXD3P31249 432 aaPredicted RBP13.14□□□□□ -0.31
CNOT3-209ENST00000617930 SETD2Q9BYW2 2564 aaPredicted RBP13.14□□□□□ -0.31
CNOT3-209ENST00000617930 NPYP01303 97 aa13.13□□□□□ -0.31
CNOT3-209ENST00000617930 VAMP3Q15836 100 aa13.13□□□□□ -0.31
CNOT3-209ENST00000617930 WFDC3Q8IUB2 231 aa13.13□□□□□ -0.31
CNOT3-209ENST00000617930 CNFNQ9BYD5 112 aa13.13□□□□□ -0.31
CNOT3-209ENST00000617930 OVOL1O14753 267 aa13.13□□□□□ -0.31
CNOT3-209ENST00000617930 LINC00477Q96M19 166 aa13.13□□□□□ -0.31
CNOT3-209ENST00000617930 F8P00451 2351 aa13.13□□□□□ -0.31
CNOT3-209ENST00000617930 RNASE1P07998 156 aaKnown RBP13.12□□□□□ -0.31
CNOT3-209ENST00000617930 FXYD7P58549 80 aa13.12□□□□□ -0.31
CNOT3-209ENST00000617930 HILS1P60008 231 aa13.12□□□□□ -0.31
CNOT3-209ENST00000617930 CACNG7P62955 275 aa13.12□□□□□ -0.31
CNOT3-209ENST00000617930 LGALS9BQ3B8N2 356 aa13.12□□□□□ -0.31
CNOT3-209ENST00000617930 LGALS9CQ6DKI2 356 aa13.12□□□□□ -0.31
CNOT3-209ENST00000617930 TAX1BP3O14907 124 aa13.12□□□□□ -0.31
CNOT3-209ENST00000617930 LGALS9O00182 355 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 GAS8-AS1O95177 125 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 SLURP1P55000 103 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 ERASQ7Z444 233 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 DEFB125Q8N687 156 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 OR4C5Q8NGB2 326 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 OR10J6PQ8NGY7 276 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 DUX3Q96PT4 197 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 MAP1LC3AQ9H492 121 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 LENEPQ9Y5L5 61 aa13.11□□□□□ -0.31
CNOT3-209ENST00000617930 DPF1Q92782 380 aa13.1□□□□□ -0.31
CNOT3-209ENST00000617930 RNF185Q96GF1 192 aa13.1□□□□□ -0.31
CNOT3-209ENST00000617930 CBY1Q9Y3M2 126 aa13.1□□□□□ -0.31
CNOT3-209ENST00000617930 CBY3A6NI87 242 aa13.1□□□□□ -0.31
CNOT3-209ENST00000617930 SNAI2O43623 268 aa13.1□□□□□ -0.31
CNOT3-209ENST00000617930 IFI27L1Q96BM0 104 aa13.1□□□□□ -0.31
CNOT3-209ENST00000617930 SPRY2O43597 315 aa13.09□□□□□ -0.31
CNOT3-209ENST00000617930 ANKRD39Q53RE8 183 aa13.09□□□□□ -0.31
CNOT3-209ENST00000617930 C2orf91Q6ZV80 131 aa13.09□□□□□ -0.31
CNOT3-209ENST00000617930 APRG1Q8IVJ8 170 aa13.09□□□□□ -0.31
CNOT3-209ENST00000617930 OR1N2Q8NGR9 330 aa13.09□□□□□ -0.31
CNOT3-209ENST00000617930 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
CNOT3-209ENST00000617930 PPBPP02775 128 aa13.08□□□□□ -0.31
CNOT3-209ENST00000617930 LINC01006Q8NI28 216 aa13.08□□□□□ -0.32
CNOT3-209ENST00000617930 K7EQG2 157 aa13.07□□□□□ -0.32
CNOT3-209ENST00000617930 ZNF688P0C7X2 276 aa13.07□□□□□ -0.32
CNOT3-209ENST00000617930 ZNF418Q8TF45 676 aaPredicted RBP13.07□□□□□ -0.32
CNOT3-209ENST00000617930 RNASE4P34096 147 aaKnown RBP13.06□□□□□ -0.32
CNOT3-209ENST00000617930 OR11H1Q8NG94 326 aa13.06□□□□□ -0.32
CNOT3-209ENST00000617930 TCTAP57738 103 aa13.06□□□□□ -0.32
CNOT3-209ENST00000617930 C11orf44Q8N8P7 122 aa13.06□□□□□ -0.32
CNOT3-209ENST00000617930 FGF6P10767 208 aa13.05□□□□□ -0.32
CNOT3-209ENST00000617930 TMEM97Q5BJF2 176 aa13.05□□□□□ -0.32
CNOT3-209ENST00000617930 PSMG4Q5JS54 123 aa13.05□□□□□ -0.32
CNOT3-209ENST00000617930 TNFRSF6BO95407 300 aa13.05□□□□□ -0.32
CNOT3-209ENST00000617930 EVI2AP22794 236 aa13.05□□□□□ -0.32
CNOT3-209ENST00000617930 C18orf15Q96N68 181 aa13.05□□□□□ -0.32
CNOT3-209ENST00000617930 NXT2Q9NPJ8 142 aaKnown RBP13.05□□□□□ -0.32
CNOT3-209ENST00000617930 C2CD3Q4AC94 2353 aa13.04□□□□□ -0.32
CNOT3-209ENST00000617930 KLLNB2CW77 178 aa13.04□□□□□ -0.32
CNOT3-209ENST00000617930 H3BVH4 76 aa13.04□□□□□ -0.32
CNOT3-209ENST00000617930 ID1P41134 155 aa13.04□□□□□ -0.32
CNOT3-209ENST00000617930 LEPP41159 167 aa13.04□□□□□ -0.32
CNOT3-209ENST00000617930 ANXA2RQ3ZCQ2 193 aa13.04□□□□□ -0.32
CNOT3-209ENST00000617930 C4orf3Q8WVX3 66 aa13.04□□□□□ -0.32
CNOT3-209ENST00000617930 C16orf95Q9H693 158 aa13.04□□□□□ -0.32
CNOT3-209ENST00000617930 TRAV21A0A0B4J279 112 aa13.03□□□□□ -0.32
CNOT3-209ENST00000617930 GNRH2O43555 120 aa13.03□□□□□ -0.32
CNOT3-209ENST00000617930 SEC11AP67812 179 aa13.03□□□□□ -0.32
CNOT3-209ENST00000617930 DLX4Q92988 240 aaPredicted RBP13.03□□□□□ -0.32
CNOT3-209ENST00000617930 LINC01619G3V211 115 aa13.03□□□□□ -0.32
CNOT3-209ENST00000617930 CD28P10747 220 aa13.03□□□□□ -0.32
CNOT3-209ENST00000617930 GATA1P15976 413 aaPredicted RBP13.03□□□□□ -0.32
CNOT3-209ENST00000617930 SMIM15Q7Z3B0 74 aa13.03□□□□□ -0.32
CNOT3-209ENST00000617930 BOD1L2Q8IYS8 172 aa13.03□□□□□ -0.32
CNOT3-209ENST00000617930 IGHV4-4A0A075B6R2 117 aa13.02□□□□□ -0.33
CNOT3-209ENST00000617930 TRBV7-9A0A0J9YWB2 115 aa13.02□□□□□ -0.33
CNOT3-209ENST00000617930 A0A0J9YX75 114 aa13.02□□□□□ -0.33
CNOT3-209ENST00000617930 K7EP13 123 aa13.02□□□□□ -0.33
CNOT3-209ENST00000617930 FCER1GP30273 86 aa13.02□□□□□ -0.33
CNOT3-209ENST00000617930 NMUP48645 174 aa13.02□□□□□ -0.33
CNOT3-209ENST00000617930 OR9G4Q8NGQ1 327 aa13.02□□□□□ -0.33
CNOT3-209ENST00000617930 RNASE8Q8TDE3 154 aaKnown RBP13.02□□□□□ -0.33
CNOT3-209ENST00000617930 C7orf71A4D174 169 aa13.01□□□□□ -0.33
CNOT3-209ENST00000617930 LINC01546A6NGU7 62 aa13.01□□□□□ -0.33
CNOT3-209ENST00000617930 SCGB2A2Q13296 93 aa13.01□□□□□ -0.33
CNOT3-209ENST00000617930 KHDC1LQ5JSQ8 128 aa13.01□□□□□ -0.33
CNOT3-209ENST00000617930 AMMECR1LQ6DCA0 310 aa13.01□□□□□ -0.33
CNOT3-209ENST00000617930 DKK2Q9UBU2 259 aa13.01□□□□□ -0.33
CNOT3-209ENST00000617930 CRLF1O75462 422 aa13.01□□□□□ -0.33
CNOT3-209ENST00000617930 KLHL30-AS1Q8NEE0 82 aa13.01□□□□□ -0.33
CNOT3-209ENST00000617930 TEP1Q99973 2627 aaKnown RBP13□□□□□ -0.33
CNOT3-209ENST00000617930 A6NDN8 102 aa13□□□□□ -0.33
CNOT3-209ENST00000617930 IGKV3-20P01619 116 aa13□□□□□ -0.33
CNOT3-209ENST00000617930 RNASE3P12724 160 aaKnown RBP13□□□□□ -0.33
CNOT3-209ENST00000617930 KRTAP10-3P60369 221 aa13□□□□□ -0.33
CNOT3-209ENST00000617930 NIPBLQ6KC79 2804 aaeCLIP13□□□□□ -0.33
CNOT3-209ENST00000617930 HSD52Q0P140 79 aa13□□□□□ -0.33
CNOT3-209ENST00000617930 SAMD13Q5VXD3 122 aa13□□□□□ -0.33
CNOT3-209ENST00000617930 SIVA1O15304 175 aa12.99□□□□□ -0.33
CNOT3-209ENST00000617930 Q8N8P6 123 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms