RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 CRIP1P50238 77 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 PTPRBP23467 1997 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 ZNF292O60281 2723 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 IGKV3D-20A0A0C4DH25 116 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 SDHAF1A6NFY7 115 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 SLURP1P55000 103 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 ZFAND3Q9H8U3 227 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 SMAD5-AS1Q9Y6J3 95 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 SFTA2Q6UW10 78 aa10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 RAI1Q7Z5J4 1906 aaPredicted RBP10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 PRRC2AP48634 2157 aaKnown RBP10.11□□□□□ -0.79
PPP4R3B-206ENST00000616407 EPG5Q9HCE0 2579 aa10.1□□□□□ -0.79
PPP4R3B-206ENST00000616407 IGLV2-11P01706 119 aa10.1□□□□□ -0.79
PPP4R3B-206ENST00000616407 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
PPP4R3B-206ENST00000616407 TP53TG1Q9Y2A0 90 aa10.1□□□□□ -0.79
PPP4R3B-206ENST00000616407 IGF1P05019 195 aa10.1□□□□□ -0.79
PPP4R3B-206ENST00000616407 CTRLP40313 264 aa10.1□□□□□ -0.79
PPP4R3B-206ENST00000616407 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
PPP4R3B-206ENST00000616407 IGHV4OR15-8A0A075B7B6 117 aa10.09□□□□□ -0.79
PPP4R3B-206ENST00000616407 A0A087WW49 117 aa10.09□□□□□ -0.79
PPP4R3B-206ENST00000616407 COX8AP10176 69 aa10.09□□□□□ -0.79
PPP4R3B-206ENST00000616407 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
PPP4R3B-206ENST00000616407 CIRBPQ14011 172 aaKnown RBP10.09□□□□□ -0.79
PPP4R3B-206ENST00000616407 MRGPRG-AS1Q2M3A8 158 aa10.09□□□□□ -0.79
PPP4R3B-206ENST00000616407 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
PPP4R3B-206ENST00000616407 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
PPP4R3B-206ENST00000616407 TMEM262E9PQX1 116 aa10.08□□□□□ -0.8
PPP4R3B-206ENST00000616407 TRPT1Q86TN4 253 aaKnown RBP10.08□□□□□ -0.8
PPP4R3B-206ENST00000616407 TRGV4A0A0C4DH28 118 aa10.08□□□□□ -0.8
PPP4R3B-206ENST00000616407 K7EMT4 169 aa10.08□□□□□ -0.8
PPP4R3B-206ENST00000616407 TMEM101Q96IK0 257 aa10.08□□□□□ -0.8
PPP4R3B-206ENST00000616407 SPEGQ15772 3267 aa10.08□□□□□ -0.8
PPP4R3B-206ENST00000616407 RPL39LQ96EH5 51 aaKnown RBP10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 IGHV3-16A0A0C4DH30 117 aa10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 CD5LO43866 347 aa10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 KIR3DS1Q14943 382 aa10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 FOXI2Q6ZQN5 318 aa10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 CHAC1Q9BUX1 264 aa10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 COX11Q9Y6N1 276 aa10.07□□□□□ -0.8
PPP4R3B-206ENST00000616407 SPTBN5Q9NRC6 3674 aaKnown RBP10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 CELSR3Q9NYQ7 3312 aa10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 RIPPLY3P57055 190 aa10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 LOXL1Q08397 574 aaPredicted RBP10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 VWC2LB2RUY7 222 aa10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 ZNF493Q6ZR52 646 aa10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 H3BRM9 83 aa10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 ZNF124Q15973 351 aa10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 LINC01545Q5VT33 79 aa10.06□□□□□ -0.8
PPP4R3B-206ENST00000616407 COX6CP09669 75 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 Q6ZS46 218 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 COL6A3P12111 3177 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 TRAV2A0A0B4J234 112 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 IGHG4P01861 327 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 RPL36AP83881 106 aaKnown RBP10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 C10orf99Q6UWK7 81 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 RPL36ALQ969Q0 106 aaKnown RBP10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 TOMM7Q9P0U1 55 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 UBE2V1Q13404 147 aa10.05□□□□□ -0.8
PPP4R3B-206ENST00000616407 F8VRH5 84 aa10.04□□□□□ -0.8
PPP4R3B-206ENST00000616407 IGLC6P0CF74 106 aa10.04□□□□□ -0.8
PPP4R3B-206ENST00000616407 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
PPP4R3B-206ENST00000616407 APRG1Q8IVJ8 170 aa10.04□□□□□ -0.8
PPP4R3B-206ENST00000616407 DOPEY1Q5JWR5 2465 aa10.04□□□□□ -0.8
PPP4R3B-206ENST00000616407 Q6ZVH6 145 aa10.04□□□□□ -0.8
PPP4R3B-206ENST00000616407 ZNF479Q96JC4 524 aa10.04□□□□□ -0.8
PPP4R3B-206ENST00000616407 HTN3P15516 51 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 PCP2Q8IVA1 136 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 AVPP01185 164 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 C20orf173Q96LM9 149 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 PMVKQ15126 192 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 A0A0U1RRA0 63 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 A8MWV9 139 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 NPSP0C0P6 89 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 ZNF843Q8N446 348 aa10.03□□□□□ -0.8
PPP4R3B-206ENST00000616407 TRAV8-2A0A0B4J237 113 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 F8W735 103 aaPredicted RBP10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 I3L3M4 83 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 CCL24O00175 119 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 SPXQ9BT56 116 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 BVES-AS1Q5T3Y7 98 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 RNF114Q9Y508 228 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 TMEM89A2RUT3 159 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 IGHV4-31P0DP07 118 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 HLA-DRB4P13762 266 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 LINC00310P59036 64 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 C1QTNF4Q9BXJ3 329 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 HLA-DRB4X5D2U9 266 aa10.02□□□□□ -0.81
PPP4R3B-206ENST00000616407 A0A087WX48 190 aa10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 RHODO00212 210 aa10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 MRPS12O15235 138 aaKnown RBP10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 CIDEAO60543 219 aa10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 Q8N1Y9 231 aa10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 CHCHD5Q9BSY4 110 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms