RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CEP170BQ9Y4F5 1589 aaPredicted RBP1.3□□□□□ -2.2
SCAMP1-205ENST00000614488 ZC3H13Q5T200 1668 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 CUL9Q8IWT3 2517 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 ANK1P16157 1881 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 PTPRFP10586 1907 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 AKAP11Q9UKA4 1901 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 PNMA8CA0A1B0GUJ8 204 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 TCRBV4S1A1TA0A5B7 111 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 IFITM5A6NNB3 132 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 E7EUB6 86 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 M0R143 59 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 M0R2P5 195 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 EDF1O60869 148 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 KLF7O75840 302 aaPredicted RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 PRB4P10163 310 aaPredicted RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 DSCR4P56555 118 aaPredicted RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 BTG2P78543 158 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 MRPL54Q6P161 138 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 Q6ZTI0 123 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 ARPINQ7Z6K5 226 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 C8orf59Q8N0T1 100 aaPredicted RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 LINC00269Q8N2A0 174 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 Q8TAT8 98 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 PSMF1Q92530 271 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 LSM10Q969L4 123 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 HEATR1Q9H583 2144 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 RERGLQ9H628 205 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 NOP16Q9Y3C1 178 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 VPS8Q8N3P4 1428 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 ATP10BO94823 1461 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 ADGRB1O14514 1584 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 LAMC1P11047 1609 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 COL4A1P02462 1669 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 KDM5AP29375 1690 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 IQGAP1P46940 1657 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 QRICH2Q9H0J4 1663 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 CASZ1Q86V15 1759 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 PLXNA2O75051 1894 aa1.29□□□□□ -2.2
SCAMP1-205ENST00000614488 PCDH15Q96QU1 1955 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 ZFHX2Q9C0A1 2572 aaPredicted RBP1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 TRAV30A0A087WSZ9 112 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 TRAV10A0A0B4J240 114 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 TRAV12-1A0A0B4J245 112 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 C2orf70A6NJV1 201 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 YPEL1O60688 119 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 ERC2-IT1O76042 136 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 IFNA17P01571 189 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 GNG2P59768 71 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 S100A10P60903 97 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 PKIAP61925 76 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 HSD52Q0P140 79 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 TPRXLQ17RH7 258 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 LINC01545Q5VT33 79 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 GKN2Q86XP6 184 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 ACBD7Q8N6N7 88 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 SFT2D1Q8WV19 159 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 ZNF625Q96I27 306 aaPredicted RBP1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 Q96M85 177 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 SMIM7Q9BQ49 75 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 NAA60Q9H7X0 242 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 A2ML1A8K2U0 1454 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 MLH3Q9UHC1 1453 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 DIP2AQ14689 1571 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 CROCC2H7BZ55 1655 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 ROBO1Q9Y6N7 1651 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 MUC4Q99102 2169 aa1.28□□□□□ -2.2
SCAMP1-205ENST00000614488 EP400Q96L91 3159 aa1.28□□□□□ -2.21
SCAMP1-205ENST00000614488 NINQ8N4C6 2090 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 MCM3APO60318 1980 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 KIAA1549LQ6ZVL6 1849 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 MROH1Q8NDA8 1641 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 ATP7AQ04656 1500 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 RALGAPBQ86X10 1494 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 IGKV2-29A2NJV5 120 aaPredicted RBP1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 MCRIP1C9JLW8 97 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 J3QLW9 94 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 GEMIN2O14893 280 aaKnown RBP1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 HYPMO75409 117 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 IL5P05113 134 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 MIR22HGQ0VDD5 57 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 ASB16-AS1Q495Z4 193 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 Q56UQ5 140 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 C9orf153Q5TBE3 101 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 CASC2Q6XLA1 102 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 ATP11AUNQ6ZP68 121 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 FOXI2Q6ZQN5 318 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 ZCCHC23Q6ZST2 131 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 C5orf17Q8NAS9 161 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 ATP6V0E2Q8NHE4 81 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 COPS9Q8WXC6 57 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 IER3IP1Q9Y5U9 82 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 CHCHD2Q9Y6H1 151 aaPredicted RBP1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 SERP1Q9Y6X1 66 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 MED12LQ86YW9 2145 aa1.27□□□□□ -2.21
SCAMP1-205ENST00000614488 LAMB4A4D0S4 1761 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 RGPD3A6NKT7 1758 aaPredicted RBP1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 RGPD4Q7Z3J3 1758 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 PLXNC1O60486 1568 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 DIP2CQ9Y2E4 1556 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms