RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 TNRC6AQ8NDV7 1962 aaKnown RBP5.35□□□□□ -1.55
CLCN3-211ENST00000613795 RP1P56715 2156 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 TEX49A0A1B0GTD5 131 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 RNF223E7ERA6 249 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 CACNA1IQ9P0X4 2223 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 PATE2Q6UY27 113 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 TMEM61Q8N0U2 210 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 TRAV25A0A0B4J276 109 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 ZNF561-AS1K7EIQ3 104 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 PRB3Q04118 309 aaPredicted RBP5.35□□□□□ -1.55
CLCN3-211ENST00000613795 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 IGLV2-8P01709 118 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 SERTAD4-AS1Q5TG53 156 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 MBD6Q96DN6 1003 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 COX7A2LO14548 114 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
CLCN3-211ENST00000613795 AGPAT4-IT1Q9H0P7 198 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 SND1-IT1Q9HBX3 110 aa5.35□□□□□ -1.55
CLCN3-211ENST00000613795 UNC13CQ8NB66 2214 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 CACNA1DQ01668 2161 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 TMEM256-PLSCR3K7ERE1 68 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 CRYGCP07315 174 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 HOXB4P17483 251 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-211ENST00000613795 C20orf197Q8N268 126 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 VPREB3Q9UKI3 123 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
CLCN3-211ENST00000613795 MIAQ16674 131 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 C17orf77Q96MU5 243 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 TET1Q8NFU7 2136 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 TRAV4A0A0B4J268 109 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 LINC00694P0DN24 101 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 GDF5OSQ5U4N7 250 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 RUSC1-AS1Q66K80 236 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 CCDC140Q96MF4 163 aa5.34□□□□□ -1.55
CLCN3-211ENST00000613795 OPRPNQ99935 248 aaPredicted RBP5.34□□□□□ -1.55
CLCN3-211ENST00000613795 A0A0J9YXV3 536 aa5.34□□□□□ -1.56
CLCN3-211ENST00000613795 A0A0U1RQV1 116 aa5.34□□□□□ -1.56
CLCN3-211ENST00000613795 DAZAP2Q15038 168 aaPredicted RBP5.34□□□□□ -1.56
CLCN3-211ENST00000613795 FAM215AQ9Y5M1 114 aa5.34□□□□□ -1.56
CLCN3-211ENST00000613795 HEATR5AQ86XA9 2040 aa5.34□□□□□ -1.56
CLCN3-211ENST00000613795 LHBP01229 141 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 FUSP35637 526 aaKnown RBP eCLIP5.33□□□□□ -1.56
CLCN3-211ENST00000613795 C4orf48Q5BLP8 95 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 RPL39LQ96EH5 51 aaKnown RBP5.33□□□□□ -1.56
CLCN3-211ENST00000613795 TRBV12-3P01733 135 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 C9orf66Q5T8R8 295 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 ODF3L1Q8IXM7 274 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 UPK3BQ9BT76 320 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 IGHV1-58A0A0C4DH39 117 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 BUB3O43684 328 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 IGHV3-53P01767 116 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 DEFB121Q5J5C9 76 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 ZNRF2Q8NHG8 242 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 TP73-AS1Q9UF72 201 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 SMIM26A0A096LP01 95 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 ZMAT4Q9H898 229 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 DOCK9Q9BZ29 2069 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 KMT2EQ8IZD2 1858 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 UBE2E2Q96LR5 201 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 MSRB1Q9NZV6 116 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 MYO7AQ13402 2215 aa5.33□□□□□ -1.56
CLCN3-211ENST00000613795 NKAPP1Q8N9T2 125 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 NXPH4O95158 308 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 SHISA2Q6UWI4 295 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 ZNF524Q96C55 264 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 LYRM9A8MSI8 78 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 NREPQ16612 68 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 C10orf105Q8TEF2 133 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 LINC00526Q96FQ7 95 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 TPSG1Q9NRR2 321 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 ZNRD1Q9P1U0 126 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 KLK9Q9UKQ9 250 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 U3KQK5 164 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 TRAV23DV6A0A075B6W5 121 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 HELZP42694 1942 aaKnown RBP5.32□□□□□ -1.56
CLCN3-211ENST00000613795 FANCMQ8IYD8 2048 aa5.32□□□□□ -1.56
CLCN3-211ENST00000613795 LECT2O14960 151 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 P0C879 139 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 LOXL1Q08397 574 aaPredicted RBP5.31□□□□□ -1.56
CLCN3-211ENST00000613795 SPINK13Q1W4C9 94 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 MDFICQ9P1T7 246 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 MRPS12O15235 138 aaKnown RBP5.31□□□□□ -1.56
CLCN3-211ENST00000613795 TIRAPP58753 221 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 Q8N976 141 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 PRSS33Q8NF86 280 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 C16orf74Q96GX8 76 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 F8WDY8 70 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 DAZ2Q13117 558 aaKnown RBP5.31□□□□□ -1.56
CLCN3-211ENST00000613795 SDIM1Q6ZPB5 146 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 DAZ4Q86SG3 579 aaKnown RBP5.31□□□□□ -1.56
CLCN3-211ENST00000613795 DAZ3Q9NR90 486 aaKnown RBP5.31□□□□□ -1.56
CLCN3-211ENST00000613795 USP17L23D6RBM5 183 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 I3L2K1 104 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 DEFB113Q30KQ7 82 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 NEXN-AS1Q8NBZ9 246 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 MPLKIPQ8TAP9 179 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 COX7B2Q8TF08 81 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 FANCD2OSQ96PS1 177 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 MLST8Q9BVC4 326 aa5.31□□□□□ -1.56
CLCN3-211ENST00000613795 CSDC2Q9Y534 153 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms