RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 BPTFQ12830 3046 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 IGLC6P0CF74 106 aa11.36□□□□□ -0.59
VPS36-207ENST00000611132 CRIP1P50238 77 aa11.35□□□□□ -0.59
VPS36-207ENST00000611132 SRSF2Q01130 221 aaKnown RBP11.35□□□□□ -0.59
VPS36-207ENST00000611132 LGALS1P09382 135 aaKnown RBP11.35□□□□□ -0.59
VPS36-207ENST00000611132 COL5A1P20908 1838 aaPredicted RBP11.34□□□□□ -0.59
VPS36-207ENST00000611132 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
VPS36-207ENST00000611132 ANKRD29Q8N6D5 301 aa11.34□□□□□ -0.59
VPS36-207ENST00000611132 IGHV7-81A0A0B4J1V7 117 aa11.34□□□□□ -0.59
VPS36-207ENST00000611132 C9orf153Q5TBE3 101 aa11.34□□□□□ -0.59
VPS36-207ENST00000611132 TOMM6Q96B49 74 aa11.34□□□□□ -0.59
VPS36-207ENST00000611132 U3KQK5 164 aa11.34□□□□□ -0.59
VPS36-207ENST00000611132 A4D1N5 150 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 CRPP02741 224 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 PRIMA1Q86XR5 153 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 ZNF415Q09FC8 603 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 PRR30Q53SZ7 412 aaPredicted RBP11.33□□□□□ -0.6
VPS36-207ENST00000611132 PTH2Q96A98 100 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 CARD19Q96LW7 228 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 FANCD2OSQ96PS1 177 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 BPESC1Q9GZL8 116 aa11.33□□□□□ -0.6
VPS36-207ENST00000611132 F6UB75 175 aa11.32□□□□□ -0.6
VPS36-207ENST00000611132 SPINK13Q1W4C9 94 aa11.32□□□□□ -0.6
VPS36-207ENST00000611132 ZNF625Q96I27 306 aaPredicted RBP11.32□□□□□ -0.6
VPS36-207ENST00000611132 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
VPS36-207ENST00000611132 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
VPS36-207ENST00000611132 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
VPS36-207ENST00000611132 PEMTQ9UBM1 199 aa11.32□□□□□ -0.6
VPS36-207ENST00000611132 KLK9Q9UKQ9 250 aa11.32□□□□□ -0.6
VPS36-207ENST00000611132 LINC00158P58513 81 aa11.31□□□□□ -0.6
VPS36-207ENST00000611132 PHLDA1Q8WV24 401 aaPredicted RBP11.31□□□□□ -0.6
VPS36-207ENST00000611132 RHOHQ15669 191 aa11.31□□□□□ -0.6
VPS36-207ENST00000611132 ZFP2Q6ZN57 461 aa11.31□□□□□ -0.6
VPS36-207ENST00000611132 TRGV2A0A075B6R0 118 aa11.31□□□□□ -0.6
VPS36-207ENST00000611132 GAGE2AQ6NT46 116 aa11.31□□□□□ -0.6
VPS36-207ENST00000611132 UFSP1Q6NVU6 142 aa11.31□□□□□ -0.6
VPS36-207ENST00000611132 LEPROTO15243 131 aa11.31□□□□□ -0.6
VPS36-207ENST00000611132 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
VPS36-207ENST00000611132 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
VPS36-207ENST00000611132 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
VPS36-207ENST00000611132 EDA2RQ9HAV5 297 aa11.3□□□□□ -0.6
VPS36-207ENST00000611132 C11orf86A6NJI1 115 aa11.3□□□□□ -0.6
VPS36-207ENST00000611132 TRAV13-1A0A0B4J241 112 aa11.3□□□□□ -0.6
VPS36-207ENST00000611132 RPL36AP83881 106 aaKnown RBP11.3□□□□□ -0.6
VPS36-207ENST00000611132 RPL36ALQ969Q0 106 aaKnown RBP11.3□□□□□ -0.6
VPS36-207ENST00000611132 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
VPS36-207ENST00000611132 RUSC1-AS1Q66K80 236 aa11.29□□□□□ -0.6
VPS36-207ENST00000611132 PIFOQ8TCI5 191 aa11.29□□□□□ -0.6
VPS36-207ENST00000611132 TRAV12-2A0A075B6T6 113 aa11.29□□□□□ -0.6
VPS36-207ENST00000611132 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
VPS36-207ENST00000611132 LINC01620Q4KN68 170 aa11.29□□□□□ -0.6
VPS36-207ENST00000611132 CEP192Q8TEP8 1941 aa11.29□□□□□ -0.6
VPS36-207ENST00000611132 Q6ZUT4 128 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 MUSTN1Q8IVN3 82 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 CRYGBP07316 175 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 NDUFA11Q86Y39 141 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 STHQ8IWL8 128 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 GATD1Q8NB37 220 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 SPANXDQ9BXN6 97 aa11.28□□□□□ -0.6
VPS36-207ENST00000611132 RPL39P62891 51 aaKnown RBP11.27□□□□□ -0.6
VPS36-207ENST00000611132 RHODO00212 210 aa11.27□□□□□ -0.61
VPS36-207ENST00000611132 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.61
VPS36-207ENST00000611132 Q8N9W7 124 aa11.27□□□□□ -0.61
VPS36-207ENST00000611132 RNF185Q96GF1 192 aa11.27□□□□□ -0.61
VPS36-207ENST00000611132 PAX4O43316 350 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 IGHG4P01861 327 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 MT-ATP8P03928 68 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 TMEM86BQ8N661 226 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 MSRB2Q9Y3D2 182 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 C16orf54Q6UWD8 224 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 TECTAO75443 2155 aa11.26□□□□□ -0.61
VPS36-207ENST00000611132 TCL1BO95988 128 aa11.25□□□□□ -0.61
VPS36-207ENST00000611132 IGHV1-69P01742 117 aa11.25□□□□□ -0.61
VPS36-207ENST00000611132 TRGV1A0A0A0MS02 117 aa11.25□□□□□ -0.61
VPS36-207ENST00000611132 HIST1H4AP62805 103 aaKnown RBP11.25□□□□□ -0.61
VPS36-207ENST00000611132 SMIM20Q8N5G0 67 aa11.25□□□□□ -0.61
VPS36-207ENST00000611132 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
VPS36-207ENST00000611132 CENPVL3A0A0U1RRI6 287 aa11.24□□□□□ -0.61
VPS36-207ENST00000611132 DEFB131AP59861 70 aa11.24□□□□□ -0.61
VPS36-207ENST00000611132 PIP4P1Q86T03 277 aa11.24□□□□□ -0.61
VPS36-207ENST00000611132 RNF183Q96D59 192 aa11.24□□□□□ -0.61
VPS36-207ENST00000611132 CHCHD5Q9BSY4 110 aa11.24□□□□□ -0.61
VPS36-207ENST00000611132 ZFHX2Q9C0A1 2572 aaPredicted RBP11.24□□□□□ -0.61
VPS36-207ENST00000611132 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
VPS36-207ENST00000611132 C22orf34Q6ZV56 151 aa11.23□□□□□ -0.61
VPS36-207ENST00000611132 TRGV4A0A0C4DH28 118 aa11.23□□□□□ -0.61
VPS36-207ENST00000611132 PRSS47A8MTI9 375 aa11.23□□□□□ -0.61
VPS36-207ENST00000611132 NEXN-AS1Q8NBZ9 246 aa11.23□□□□□ -0.61
VPS36-207ENST00000611132 SPATA25Q9BR10 227 aa11.23□□□□□ -0.61
VPS36-207ENST00000611132 UTRNP46939 3433 aa11.22□□□□□ -0.61
VPS36-207ENST00000611132 CFAP161Q6P656 301 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms