RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TMEM88Q6PEY1 159 aa9.75□□□□□ -0.85
RNF40-212ENST00000602784 C15orf53Q8NAA6 179 aa9.75□□□□□ -0.85
RNF40-212ENST00000602784 SMIM7Q9BQ49 75 aa9.75□□□□□ -0.85
RNF40-212ENST00000602784 TMSB15BA0A087X1C1 80 aa9.74□□□□□ -0.85
RNF40-212ENST00000602784 TRAV4A0A0B4J268 109 aa9.74□□□□□ -0.85
RNF40-212ENST00000602784 GRIFINA4D1Z8 144 aa9.74□□□□□ -0.85
RNF40-212ENST00000602784 ZNF727A8MUV8 499 aa9.74□□□□□ -0.85
RNF40-212ENST00000602784 K7EN84 100 aa9.74□□□□□ -0.85
RNF40-212ENST00000602784 HOXA5P20719 270 aa9.74□□□□□ -0.85
RNF40-212ENST00000602784 RPS20P60866 119 aaKnown RBP9.74□□□□□ -0.85
RNF40-212ENST00000602784 POM121L12Q8N7R1 296 aa9.74□□□□□ -0.85
RNF40-212ENST00000602784 LCE6AA0A183 80 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 XKRY2A2RUG3 117 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 C9JQL5 133 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 H3BVH4 76 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 P01737 135 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 RPL19P84098 196 aaKnown RBP9.73□□□□□ -0.85
RNF40-212ENST00000602784 SRSF3P84103 164 aaKnown RBP9.73□□□□□ -0.85
RNF40-212ENST00000602784 FHL2Q14192 279 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 SYT8Q8NBV8 401 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 OR4C5Q8NGB2 326 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 SSBP4Q9BWG4 385 aaPredicted RBP9.73□□□□□ -0.85
RNF40-212ENST00000602784 PHLDA3Q9Y5J5 127 aa9.73□□□□□ -0.85
RNF40-212ENST00000602784 RS1O15537 224 aa9.72□□□□□ -0.85
RNF40-212ENST00000602784 OR5AL1P0C617 328 aa9.72□□□□□ -0.85
RNF40-212ENST00000602784 LGALS9CQ6DKI2 356 aa9.72□□□□□ -0.85
RNF40-212ENST00000602784 NUDT10Q8NFP7 164 aa9.72□□□□□ -0.85
RNF40-212ENST00000602784 OR2D3Q8NGH3 330 aa9.72□□□□□ -0.85
RNF40-212ENST00000602784 NUDT11Q96G61 164 aa9.72□□□□□ -0.85
RNF40-212ENST00000602784 ZNF479Q96JC4 524 aa9.72□□□□□ -0.85
RNF40-212ENST00000602784 TRAV26-1A0A087WT03 109 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 A8MWV9 139 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 SNAI2O43623 268 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 NXPH4O95158 308 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 IGHV3-53P01767 116 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 TMEM241Q24JQ0 296 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 CFAP126Q5VTH2 177 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 FAM231DQ6ZW35 169 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 LINC01551Q86U37 167 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 LINC00476Q8WZB0 136 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 PRO0255Q9UI72 69 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 HHLA3Q9XRX5 114 aa9.71□□□□□ -0.86
RNF40-212ENST00000602784 TRGV4A0A0C4DH28 118 aa9.7□□□□□ -0.86
RNF40-212ENST00000602784 SFTA3P0C7M3 94 aa9.7□□□□□ -0.86
RNF40-212ENST00000602784 SOHLH1Q5JUK2 328 aa9.7□□□□□ -0.86
RNF40-212ENST00000602784 ZFP2Q6ZN57 461 aa9.7□□□□□ -0.86
RNF40-212ENST00000602784 ZFP82Q8N141 532 aa9.7□□□□□ -0.86
RNF40-212ENST00000602784 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
RNF40-212ENST00000602784 RNASE7Q9H1E1 156 aaKnown RBP9.7□□□□□ -0.86
RNF40-212ENST00000602784 A0A1W2PPQ1 181 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 F2Z2F3 143 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 PAX4O43316 350 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 IGLC6P0CF74 106 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 P0DMU3 169 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 FAM231AP0DMU4 169 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 FAM231CP0DMU5 169 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 CRYBA4P53673 196 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 RPP21Q9H633 154 aaKnown RBP9.69□□□□□ -0.86
RNF40-212ENST00000602784 NAT8Q9UHE5 227 aa9.69□□□□□ -0.86
RNF40-212ENST00000602784 PLECQ15149 4684 aaKnown RBP9.68□□□□□ -0.86
RNF40-212ENST00000602784 A0A0J9YY99 117 aa9.68□□□□□ -0.86
RNF40-212ENST00000602784 GATA1P15976 413 aaPredicted RBP9.68□□□□□ -0.86
RNF40-212ENST00000602784 CT83Q5H943 113 aa9.68□□□□□ -0.86
RNF40-212ENST00000602784 FER1L6-AS1Q8NA97 138 aa9.68□□□□□ -0.86
RNF40-212ENST00000602784 OR10AG1Q8NH19 301 aa9.68□□□□□ -0.86
RNF40-212ENST00000602784 SFRP2Q96HF1 295 aa9.68□□□□□ -0.86
RNF40-212ENST00000602784 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
RNF40-212ENST00000602784 KMT2CQ8NEZ4 4911 aaKnown RBP9.67□□□□□ -0.86
RNF40-212ENST00000602784 M0R381 172 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 RHODO00212 210 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 GATCO43716 136 aaKnown RBP9.67□□□□□ -0.86
RNF40-212ENST00000602784 LY6G6CO95867 125 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 NUDT3O95989 172 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 GZMBP10144 247 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 ERVFC1-1P60608 527 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 RNF212Q495C1 297 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 UFSP1Q6NVU6 142 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 WDR73Q6P4I2 378 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 OSTCQ9NRP0 149 aa9.67□□□□□ -0.86
RNF40-212ENST00000602784 LYSTQ99698 3801 aa9.66□□□□□ -0.86
RNF40-212ENST00000602784 TRBV6-4A0A1B0GX49 114 aa9.66□□□□□ -0.86
RNF40-212ENST00000602784 A8MWL6 223 aa9.66□□□□□ -0.86
RNF40-212ENST00000602784 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
RNF40-212ENST00000602784 CACNG7P62955 275 aa9.66□□□□□ -0.86
RNF40-212ENST00000602784 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
RNF40-212ENST00000602784 UQCC3Q6UW78 93 aa9.66□□□□□ -0.86
RNF40-212ENST00000602784 JPT2Q9H910 190 aa9.66□□□□□ -0.86
RNF40-212ENST00000602784 CRYGDP07320 174 aa9.65□□□□□ -0.86
RNF40-212ENST00000602784 CTRLP40313 264 aa9.65□□□□□ -0.86
RNF40-212ENST00000602784 FAM3BP58499 235 aaPredicted RBP9.65□□□□□ -0.86
RNF40-212ENST00000602784 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
RNF40-212ENST00000602784 C15orf54Q8N8G6 183 aa9.65□□□□□ -0.86
RNF40-212ENST00000602784 ISOC2Q96AB3 205 aa9.65□□□□□ -0.86
RNF40-212ENST00000602784 CNFNQ9BYD5 112 aa9.65□□□□□ -0.86
RNF40-212ENST00000602784 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.86
RNF40-212ENST00000602784 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.87
RNF40-212ENST00000602784 A0A096LPF7 62 aa9.64□□□□□ -0.87
RNF40-212ENST00000602784 FAM231BA6NCW3 169 aa9.64□□□□□ -0.87
RNF40-212ENST00000602784 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms