RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SPXQ9BT56 116 aa13.45□□□□□ -0.26
SSBP4-212ENST00000601919 SCRT2Q9NQ03 307 aa13.45□□□□□ -0.26
SSBP4-212ENST00000601919 MDFICQ9P1T7 246 aa13.45□□□□□ -0.26
SSBP4-212ENST00000601919 NBEAL1Q6ZS30 2694 aa13.44□□□□□ -0.26
SSBP4-212ENST00000601919 SNURFLB1AK76 121 aa13.44□□□□□ -0.26
SSBP4-212ENST00000601919 SPANXN1Q5VSR9 72 aa13.44□□□□□ -0.26
SSBP4-212ENST00000601919 ZFP82Q8N141 532 aa13.44□□□□□ -0.26
SSBP4-212ENST00000601919 SYT8Q8NBV8 401 aa13.44□□□□□ -0.26
SSBP4-212ENST00000601919 OR11H2Q8NH07 326 aa13.44□□□□□ -0.26
SSBP4-212ENST00000601919 RNASE8Q8TDE3 154 aaKnown RBP13.44□□□□□ -0.26
SSBP4-212ENST00000601919 CNFNQ9BYD5 112 aa13.44□□□□□ -0.26
SSBP4-212ENST00000601919 SPINK4O60575 86 aa13.43□□□□□ -0.26
SSBP4-212ENST00000601919 COX19Q49B96 90 aa13.43□□□□□ -0.26
SSBP4-212ENST00000601919 RASL11AQ6T310 242 aa13.43□□□□□ -0.26
SSBP4-212ENST00000601919 C11orf72Q8NBR9 251 aa13.43□□□□□ -0.26
SSBP4-212ENST00000601919 MRAPQ8TCY5 172 aa13.43□□□□□ -0.26
SSBP4-212ENST00000601919 YPEL4Q96NS1 127 aa13.43□□□□□ -0.26
SSBP4-212ENST00000601919 GSN-AS1Q9NRJ2 163 aa13.43□□□□□ -0.26
SSBP4-212ENST00000601919 IGHV4-4A0A075B6R2 117 aa13.42□□□□□ -0.26
SSBP4-212ENST00000601919 TGIF2-C20orf24A0A0A6YYL0 155 aa13.42□□□□□ -0.26
SSBP4-212ENST00000601919 PRM2P04554 102 aa13.42□□□□□ -0.26
SSBP4-212ENST00000601919 MIFP14174 115 aa13.42□□□□□ -0.26
SSBP4-212ENST00000601919 AZU1P20160 251 aa13.42□□□□□ -0.26
SSBP4-212ENST00000601919 HBBP68871 147 aa13.42□□□□□ -0.26
SSBP4-212ENST00000601919 MRPL54Q6P161 138 aaKnown RBP13.42□□□□□ -0.26
SSBP4-212ENST00000601919 FAM210BQ96KR6 192 aa13.42□□□□□ -0.26
SSBP4-212ENST00000601919 X6R8D5 127 aa13.42□□□□□ -0.26
SSBP4-212ENST00000601919 M0R2P5 195 aa13.41□□□□□ -0.26
SSBP4-212ENST00000601919 TWIST1Q15672 202 aa13.41□□□□□ -0.26
SSBP4-212ENST00000601919 OR10AG1Q8NH19 301 aa13.41□□□□□ -0.26
SSBP4-212ENST00000601919 PTH2Q96A98 100 aa13.41□□□□□ -0.26
SSBP4-212ENST00000601919 M0R381 172 aa13.4□□□□□ -0.26
SSBP4-212ENST00000601919 NXPH4O95158 308 aa13.4□□□□□ -0.26
SSBP4-212ENST00000601919 NTF3P20783 257 aa13.4□□□□□ -0.26
SSBP4-212ENST00000601919 PIK3CD-AS1Q5SR53 167 aa13.4□□□□□ -0.26
SSBP4-212ENST00000601919 SMIM15Q7Z3B0 74 aa13.4□□□□□ -0.26
SSBP4-212ENST00000601919 NDUFAF3Q9BU61 184 aa13.4□□□□□ -0.26
SSBP4-212ENST00000601919 MUC21A0A0G2JKD1 596 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 MUC21A0A140T8X8 626 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 A0A1B0GXF2 115 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 COLCA2A8K830 154 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 TRGC1P0CF51 173 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 SSTP61278 116 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 DAZ2Q13117 558 aaKnown RBP13.39□□□□□ -0.27
SSBP4-212ENST00000601919 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 OVOL2Q9BRP0 275 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 DNAH3Q8TD57 4116 aa13.39□□□□□ -0.27
SSBP4-212ENST00000601919 MUC4Q99102 2169 aa13.38□□□□□ -0.27
SSBP4-212ENST00000601919 CAMPP49913 170 aa13.38□□□□□ -0.27
SSBP4-212ENST00000601919 LGALS9BQ3B8N2 356 aa13.38□□□□□ -0.27
SSBP4-212ENST00000601919 ZNF876PQ49A33 203 aa13.38□□□□□ -0.27
SSBP4-212ENST00000601919 SBSPONQ8IVN8 264 aa13.38□□□□□ -0.27
SSBP4-212ENST00000601919 IL17DQ8TAD2 202 aa13.38□□□□□ -0.27
SSBP4-212ENST00000601919 RAB4BP61018 213 aa13.37□□□□□ -0.27
SSBP4-212ENST00000601919 DMRTA1Q5VZB9 504 aa13.37□□□□□ -0.27
SSBP4-212ENST00000601919 AP1S3Q96PC3 154 aa13.37□□□□□ -0.27
SSBP4-212ENST00000601919 MT-ND6P03923 174 aa13.36□□□□□ -0.27
SSBP4-212ENST00000601919 RAB5AP20339 215 aa13.36□□□□□ -0.27
SSBP4-212ENST00000601919 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.36□□□□□ -0.27
SSBP4-212ENST00000601919 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
SSBP4-212ENST00000601919 GNB1LQ9BYB4 327 aa13.36□□□□□ -0.27
SSBP4-212ENST00000601919 NOP10Q9NPE3 64 aaKnown RBP13.36□□□□□ -0.27
SSBP4-212ENST00000601919 IGHV4-28A0A0C4DH34 117 aa13.35□□□□□ -0.27
SSBP4-212ENST00000601919 PLAC8L1A1L4L8 177 aa13.35□□□□□ -0.27
SSBP4-212ENST00000601919 HLA-DQA1P01909 254 aa13.35□□□□□ -0.27
SSBP4-212ENST00000601919 SMIM17P0DL12 118 aa13.35□□□□□ -0.27
SSBP4-212ENST00000601919 EMP1P54849 157 aa13.35□□□□□ -0.27
SSBP4-212ENST00000601919 Q8NAQ8 132 aa13.35□□□□□ -0.27
SSBP4-212ENST00000601919 RASL10AQ92737 203 aa13.35□□□□□ -0.27
SSBP4-212ENST00000601919 ZMAT4Q9H898 229 aa13.35□□□□□ -0.27
SSBP4-212ENST00000601919 TRGV1A0A0A0MS02 117 aa13.34□□□□□ -0.27
SSBP4-212ENST00000601919 A8MWV9 139 aa13.34□□□□□ -0.27
SSBP4-212ENST00000601919 RPS10P46783 165 aaKnown RBP13.34□□□□□ -0.27
SSBP4-212ENST00000601919 GATD1Q8NB37 220 aa13.34□□□□□ -0.27
SSBP4-212ENST00000601919 B9D2Q9BPU9 175 aa13.34□□□□□ -0.27
SSBP4-212ENST00000601919 TMEM191AQ9H0A3 160 aa13.34□□□□□ -0.27
SSBP4-212ENST00000601919 RETNQ9HD89 108 aa13.34□□□□□ -0.27
SSBP4-212ENST00000601919 MSRB1Q9NZV6 116 aa13.34□□□□□ -0.27
SSBP4-212ENST00000601919 TEX48A0A1B0GUV7 120 aa13.33□□□□□ -0.28
SSBP4-212ENST00000601919 LYRM9A8MSI8 78 aa13.33□□□□□ -0.28
SSBP4-212ENST00000601919 DEFA6Q01524 100 aa13.33□□□□□ -0.28
SSBP4-212ENST00000601919 MRPL16Q9NX20 251 aaKnown RBP13.33□□□□□ -0.28
SSBP4-212ENST00000601919 TMEM136Q6ZRR5 245 aa13.32□□□□□ -0.28
SSBP4-212ENST00000601919 DPH3P1Q9H4G8 78 aa13.32□□□□□ -0.28
SSBP4-212ENST00000601919 TRAPPC1Q9Y5R8 145 aa13.32□□□□□ -0.28
SSBP4-212ENST00000601919 FRZBQ92765 325 aa13.31□□□□□ -0.28
SSBP4-212ENST00000601919 APCSP02743 223 aa13.3□□□□□ -0.28
SSBP4-212ENST00000601919 SPART-AS1P0CW21 52 aa13.3□□□□□ -0.28
SSBP4-212ENST00000601919 EVI2AP22794 236 aa13.3□□□□□ -0.28
SSBP4-212ENST00000601919 Q6ZTI0 123 aa13.3□□□□□ -0.28
SSBP4-212ENST00000601919 C14orf178Q8N769 122 aaPredicted RBP13.3□□□□□ -0.28
SSBP4-212ENST00000601919 C11orf68Q9H3H3 251 aaKnown RBP13.3□□□□□ -0.28
SSBP4-212ENST00000601919 DNHD1Q96M86 4753 aa13.29□□□□□ -0.28
SSBP4-212ENST00000601919 TRGV2A0A075B6R0 118 aa13.29□□□□□ -0.28
SSBP4-212ENST00000601919 RHODO00212 210 aa13.29□□□□□ -0.28
SSBP4-212ENST00000601919 FAM222AQ5U5X8 452 aa13.29□□□□□ -0.28
SSBP4-212ENST00000601919 FAM104BQ5XKR9 115 aa13.29□□□□□ -0.28
SSBP4-212ENST00000601919 MRPL18Q9H0U6 180 aaKnown RBP13.29□□□□□ -0.28
SSBP4-212ENST00000601919 DKK2Q9UBU2 259 aa13.29□□□□□ -0.28
SSBP4-212ENST00000601919 GAGE12BA1L429 117 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms