RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 M0R036 132 aa15.5■□□□□ 0.07
CCDC9-204ENST00000599398 RS1O15537 224 aa15.5■□□□□ 0.07
CCDC9-204ENST00000599398 GATA1P15976 413 aaPredicted RBP15.5■□□□□ 0.07
CCDC9-204ENST00000599398 TCTE3Q8IZS6 198 aa15.5■□□□□ 0.07
CCDC9-204ENST00000599398 PKD1P98161 4303 aa15.49■□□□□ 0.07
CCDC9-204ENST00000599398 SH2D1AO60880 128 aa15.49■□□□□ 0.07
CCDC9-204ENST00000599398 CRIP1P50238 77 aa15.49■□□□□ 0.07
CCDC9-204ENST00000599398 FAM162BQ5T6X4 162 aa15.49■□□□□ 0.07
CCDC9-204ENST00000599398 NHLRC2Q8NBF2 726 aa15.49■□□□□ 0.07
CCDC9-204ENST00000599398 TRBV6-1A0A0K0K1D8 114 aa15.48■□□□□ 0.07
CCDC9-204ENST00000599398 LTAP01374 205 aa15.48■□□□□ 0.07
CCDC9-204ENST00000599398 LGALSLQ3ZCW2 172 aaPredicted RBP15.48■□□□□ 0.07
CCDC9-204ENST00000599398 COX8CQ7Z4L0 72 aa15.48■□□□□ 0.07
CCDC9-204ENST00000599398 PTH2Q96A98 100 aa15.48■□□□□ 0.07
CCDC9-204ENST00000599398 SCO2A0A1W2PP80 73 aa15.47■□□□□ 0.07
CCDC9-204ENST00000599398 CIDEAO60543 219 aa15.47■□□□□ 0.07
CCDC9-204ENST00000599398 EIF5AL1Q6IS14 154 aaKnown RBP15.47■□□□□ 0.07
CCDC9-204ENST00000599398 Q6ZNX1 250 aa15.47■□□□□ 0.07
CCDC9-204ENST00000599398 GRIFINA4D1Z8 144 aa15.46■□□□□ 0.07
CCDC9-204ENST00000599398 KRBOX1C9JBD0 128 aa15.46■□□□□ 0.07
CCDC9-204ENST00000599398 H3BVH4 76 aa15.46■□□□□ 0.07
CCDC9-204ENST00000599398 SLC25A29Q8N8R3 303 aa15.46■□□□□ 0.07
CCDC9-204ENST00000599398 PRADC1Q9BSG0 188 aa15.46■□□□□ 0.07
CCDC9-204ENST00000599398 IL36BQ9NZH7 164 aa15.46■□□□□ 0.07
CCDC9-204ENST00000599398 S100A9P06702 114 aaKnown RBP15.45■□□□□ 0.06
CCDC9-204ENST00000599398 RHOHQ15669 191 aa15.45■□□□□ 0.06
CCDC9-204ENST00000599398 ZNF674Q2M3X9 581 aa15.45■□□□□ 0.06
CCDC9-204ENST00000599398 SH2D6Q7Z4S9 175 aa15.45■□□□□ 0.06
CCDC9-204ENST00000599398 TMSB15BA0A087X1C1 80 aa15.44■□□□□ 0.06
CCDC9-204ENST00000599398 C1QBP02746 253 aa15.44■□□□□ 0.06
CCDC9-204ENST00000599398 RAB5CP51148 216 aa15.44■□□□□ 0.06
CCDC9-204ENST00000599398 GNG13Q9P2W3 67 aa15.44■□□□□ 0.06
CCDC9-204ENST00000599398 hCG_2014768A0A024R1R8 64 aa15.43■□□□□ 0.06
CCDC9-204ENST00000599398 TRBV6-4A0A1B0GX49 114 aa15.43■□□□□ 0.06
CCDC9-204ENST00000599398 A8MWV9 139 aa15.43■□□□□ 0.06
CCDC9-204ENST00000599398 ARMS2P0C7Q2 107 aa15.43■□□□□ 0.06
CCDC9-204ENST00000599398 LINC00315P59091 139 aa15.43■□□□□ 0.06
CCDC9-204ENST00000599398 WFDC10BQ8IUB3 73 aa15.43■□□□□ 0.06
CCDC9-204ENST00000599398 LY96Q9Y6Y9 160 aa15.43■□□□□ 0.06
CCDC9-204ENST00000599398 KIAA1109Q2LD37 5005 aa15.42■□□□□ 0.06
CCDC9-204ENST00000599398 TEX46H3BTG2 121 aa15.42■□□□□ 0.06
CCDC9-204ENST00000599398 MGST1P10620 155 aaKnown RBP15.42■□□□□ 0.06
CCDC9-204ENST00000599398 BTF3P20290 206 aaKnown RBP15.42■□□□□ 0.06
CCDC9-204ENST00000599398 CCL20P78556 96 aa15.42■□□□□ 0.06
CCDC9-204ENST00000599398 LINC01559Q495D7 138 aa15.42■□□□□ 0.06
CCDC9-204ENST00000599398 SYT8Q8NBV8 401 aa15.42■□□□□ 0.06
CCDC9-204ENST00000599398 PARLQ9H300 379 aa15.42■□□□□ 0.06
CCDC9-204ENST00000599398 MANBALQ9NQG1 85 aa15.42■□□□□ 0.06
CCDC9-204ENST00000599398 HERC2O95714 4834 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 DNAH11Q96DT5 4516 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 DYNC1H1Q14204 4646 aaKnown RBP15.41■□□□□ 0.06
CCDC9-204ENST00000599398 TRAV9-2A0A087WT02 112 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 PIK3CD-AS1Q5SR53 167 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 DNLZQ5SXM8 178 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 DMRTA1Q5VZB9 504 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 AKAP14Q86UN6 197 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 ZNF575Q86XF7 245 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 BAGE2Q86Y30 109 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 JPT2Q9H910 190 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 PHLDA3Q9Y5J5 127 aa15.41■□□□□ 0.06
CCDC9-204ENST00000599398 TRAV1-1A0A0B4J248 108 aa15.4■□□□□ 0.06
CCDC9-204ENST00000599398 SULT1A2P50226 295 aa15.4■□□□□ 0.06
CCDC9-204ENST00000599398 ZFP2Q6ZN57 461 aa15.4■□□□□ 0.06
CCDC9-204ENST00000599398 SLC51BQ86UW2 128 aa15.4■□□□□ 0.06
CCDC9-204ENST00000599398 EVI2AP22794 236 aa15.39■□□□□ 0.05
CCDC9-204ENST00000599398 Q6ZSN1 163 aa15.38■□□□□ 0.05
CCDC9-204ENST00000599398 SAMD10Q9BYL1 202 aa15.38■□□□□ 0.05
CCDC9-204ENST00000599398 M0R381 172 aa15.37■□□□□ 0.05
CCDC9-204ENST00000599398 MED14OSP0DP75 135 aa15.37■□□□□ 0.05
CCDC9-204ENST00000599398 RPL35P42766 123 aaKnown RBP15.37■□□□□ 0.05
CCDC9-204ENST00000599398 TIRAPP58753 221 aa15.37■□□□□ 0.05
CCDC9-204ENST00000599398 FAM74A4Q5TZK3 123 aa15.37■□□□□ 0.05
CCDC9-204ENST00000599398 PRR27Q6MZM9 219 aa15.37■□□□□ 0.05
CCDC9-204ENST00000599398 TNFRSF18Q9Y5U5 241 aa15.37■□□□□ 0.05
CCDC9-204ENST00000599398 C16orf90A8MZG2 172 aa15.36■□□□□ 0.05
CCDC9-204ENST00000599398 DNAH10OSP0CZ25 163 aa15.36■□□□□ 0.05
CCDC9-204ENST00000599398 RPL19P84098 196 aaKnown RBP15.36■□□□□ 0.05
CCDC9-204ENST00000599398 ATP6V0E2Q8NHE4 81 aa15.36■□□□□ 0.05
CCDC9-204ENST00000599398 MLST8Q9BVC4 326 aa15.36■□□□□ 0.05
CCDC9-204ENST00000599398 SCRT2Q9NQ03 307 aa15.36■□□□□ 0.05
CCDC9-204ENST00000599398 RHODO00212 210 aa15.35■□□□□ 0.05
CCDC9-204ENST00000599398 OR10J3Q5JRS4 329 aa15.35■□□□□ 0.05
CCDC9-204ENST00000599398 ZFP82Q8N141 532 aa15.35■□□□□ 0.05
CCDC9-204ENST00000599398 DERL1Q9BUN8 251 aa15.35■□□□□ 0.05
CCDC9-204ENST00000599398 A0A087WWL8 130 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 TRAV8-6A0A0B4J262 113 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 GAGE12JA6NER3 117 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 K7EP13 123 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 IFNA1P01562 189 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 GAGE1Q13065 139 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 GAGE4Q13068 117 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 GAGE5Q13069 117 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 GAGE13Q4V321 117 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 UFSP1Q6NVU6 142 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 Q6ZRN7 208 aaPredicted RBP15.34■□□□□ 0.05
CCDC9-204ENST00000599398 SPATA12Q7Z6I5 190 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 C11orf52Q96A22 123 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 GTSF1LQ9H1H1 148 aa15.34■□□□□ 0.05
CCDC9-204ENST00000599398 IGHV3-38A0A0C4DH36 116 aa15.33■□□□□ 0.04
CCDC9-204ENST00000599398 CRYGDP07320 174 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms