RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 NTN5Q8WTR8 489 aaPredicted RBP9.19□□□□□ -0.94
SHKBP1-208ENST00000595726 IGHV3-16A0A0C4DH30 117 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 KANTRA0A1W2PQU2 76 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 FBLL1A6NHQ2 334 aaKnown RBP9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 GNRH2O43555 120 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 IGHV3-53P01767 116 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 SEC11BP0C7V7 166 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 Q8N814 137 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 LINC00479Q96M42 142 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 SPXQ9BT56 116 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 ZNF471Q9BX82 626 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 SDF2L1Q9HCN8 221 aa9.18□□□□□ -0.94
SHKBP1-208ENST00000595726 PEX7O00628 323 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 PSCAO43653 123 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 GCGP01275 180 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 IFNA7P01567 189 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 ZFP69Q49AA0 526 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 Q6ZSA8 131 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 RASL10AQ92737 203 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 KCNS1Q96KK3 526 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 NKX6-2Q9C056 277 aaPredicted RBP9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
SHKBP1-208ENST00000595726 TRAV34A0A0B4J273 112 aa9.16□□□□□ -0.94
SHKBP1-208ENST00000595726 C1QBP02746 253 aa9.16□□□□□ -0.94
SHKBP1-208ENST00000595726 PFN1P07737 140 aaKnown RBP9.16□□□□□ -0.94
SHKBP1-208ENST00000595726 EVI2AP22794 236 aa9.16□□□□□ -0.94
SHKBP1-208ENST00000595726 FHL2Q14192 279 aa9.16□□□□□ -0.94
SHKBP1-208ENST00000595726 SMUG1Q53HV7 270 aa9.16□□□□□ -0.94
SHKBP1-208ENST00000595726 Q86TA4 180 aa9.16□□□□□ -0.94
SHKBP1-208ENST00000595726 ARL2-SNX15V9GYD0 113 aa9.16□□□□□ -0.94
SHKBP1-208ENST00000595726 UMAD1C9J7I0 102 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 M0R2P5 195 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 CRYGDP07320 174 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 SFTA3P0C7M3 94 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 PPT1P50897 306 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 CRYBA4P53673 196 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 SAPCD1Q5SSQ6 148 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 TMUB2Q71RG4 321 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 STOML3Q8TAV4 291 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 FAM213BQ8TBF2 198 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 ZNF479Q96JC4 524 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 PRO0255Q9UI72 69 aa9.15□□□□□ -0.94
SHKBP1-208ENST00000595726 PFDN1O60925 122 aa9.14□□□□□ -0.95
SHKBP1-208ENST00000595726 TPT1P13693 172 aaKnown RBP9.14□□□□□ -0.95
SHKBP1-208ENST00000595726 SLAQ13239 276 aa9.14□□□□□ -0.95
SHKBP1-208ENST00000595726 TCTE3Q8IZS6 198 aa9.14□□□□□ -0.95
SHKBP1-208ENST00000595726 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
SHKBP1-208ENST00000595726 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
SHKBP1-208ENST00000595726 TRAV4A0A0B4J268 109 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 EIF5AP63241 154 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 MRPL23Q16540 153 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 LINC01620Q4KN68 170 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 DPPA3Q6W0C5 159 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 Q6ZNX1 250 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 SCXQ7RTU7 201 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 NEGR1Q7Z3B1 354 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 SFT2D1Q8WV19 159 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 TCEAL7Q9BRU2 100 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 TNXBP22105 4242 aa9.13□□□□□ -0.95
SHKBP1-208ENST00000595726 A0A1B0GV50 99 aa9.12□□□□□ -0.95
SHKBP1-208ENST00000595726 PAGE4O60829 102 aa9.12□□□□□ -0.95
SHKBP1-208ENST00000595726 WFDC2Q14508 124 aa9.12□□□□□ -0.95
SHKBP1-208ENST00000595726 CST9LP1Q5W188 147 aa9.12□□□□□ -0.95
SHKBP1-208ENST00000595726 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
SHKBP1-208ENST00000595726 C9orf85Q96MD7 179 aa9.12□□□□□ -0.95
SHKBP1-208ENST00000595726 Q9HAA7 133 aa9.12□□□□□ -0.95
SHKBP1-208ENST00000595726 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
SHKBP1-208ENST00000595726 K7EP13 123 aa9.11□□□□□ -0.95
SHKBP1-208ENST00000595726 RNASE3P12724 160 aaKnown RBP9.11□□□□□ -0.95
SHKBP1-208ENST00000595726 UBE2G1P62253 170 aa9.11□□□□□ -0.95
SHKBP1-208ENST00000595726 LGALSLQ3ZCW2 172 aaPredicted RBP9.11□□□□□ -0.95
SHKBP1-208ENST00000595726 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
SHKBP1-208ENST00000595726 OR4C5Q8NGB2 326 aa9.11□□□□□ -0.95
SHKBP1-208ENST00000595726 ZC2HC1AQ96GY0 325 aa9.11□□□□□ -0.95
SHKBP1-208ENST00000595726 TRBV6-1A0A0K0K1D8 114 aa9.1□□□□□ -0.95
SHKBP1-208ENST00000595726 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
SHKBP1-208ENST00000595726 C9JCJ5 164 aa9.1□□□□□ -0.95
SHKBP1-208ENST00000595726 K7EQD1 137 aa9.1□□□□□ -0.95
SHKBP1-208ENST00000595726 H2AFB1P0C5Y9 115 aa9.1□□□□□ -0.95
SHKBP1-208ENST00000595726 CRIP1P50238 77 aa9.1□□□□□ -0.95
SHKBP1-208ENST00000595726 ZNF876PQ49A33 203 aa9.1□□□□□ -0.95
SHKBP1-208ENST00000595726 ZFP30Q9Y2G7 519 aa9.1□□□□□ -0.95
SHKBP1-208ENST00000595726 LTAP01374 205 aa9.09□□□□□ -0.95
SHKBP1-208ENST00000595726 AKR1C3P42330 323 aa9.09□□□□□ -0.95
SHKBP1-208ENST00000595726 ZNF506Q5JVG8 444 aa9.09□□□□□ -0.95
SHKBP1-208ENST00000595726 SCO2A0A1W2PP80 73 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 PGPEP1LA6NFU8 196 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 LECT2O14960 151 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 SH2D1AO60880 128 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 ORM1P02763 201 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 GYPEP15421 78 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 GATA1P15976 413 aaPredicted RBP9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 SRIP30626 198 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 ASIPP42127 132 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 HNRNPA3P51991 378 aaKnown RBP9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 C10orf126Q8N4M7 172 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms