RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 KRBOX1C9JBD0 128 aa12.66□□□□□ -0.38
SHKBP1-202ENST00000593764 SH2D1AO60880 128 aa12.66□□□□□ -0.38
SHKBP1-202ENST00000593764 C1QBP02746 253 aa12.66□□□□□ -0.38
SHKBP1-202ENST00000593764 ORM1P02763 201 aa12.66□□□□□ -0.38
SHKBP1-202ENST00000593764 CCL20P78556 96 aa12.66□□□□□ -0.38
SHKBP1-202ENST00000593764 ZNF674Q2M3X9 581 aa12.66□□□□□ -0.38
SHKBP1-202ENST00000593764 TTC32Q5I0X7 151 aa12.66□□□□□ -0.38
SHKBP1-202ENST00000593764 SCO2A0A1W2PP80 73 aa12.65□□□□□ -0.38
SHKBP1-202ENST00000593764 A0A1W2PPQ1 181 aa12.65□□□□□ -0.38
SHKBP1-202ENST00000593764 B4DEV8 164 aa12.65□□□□□ -0.38
SHKBP1-202ENST00000593764 NXPH4O95158 308 aa12.65□□□□□ -0.38
SHKBP1-202ENST00000593764 SRIP30626 198 aa12.65□□□□□ -0.38
SHKBP1-202ENST00000593764 AKR1C3P42330 323 aa12.65□□□□□ -0.38
SHKBP1-202ENST00000593764 TNP2Q05952 138 aa12.65□□□□□ -0.38
SHKBP1-202ENST00000593764 FAM162BQ5T6X4 162 aa12.65□□□□□ -0.38
SHKBP1-202ENST00000593764 TRAV1-1A0A0B4J248 108 aa12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 SIVA1O15304 175 aa12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 CIDEAO60543 219 aa12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 S100A4P26447 101 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 RAB5CP51148 216 aa12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 DNLZQ5SXM8 178 aa12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 SLC25A29Q8N8R3 303 aa12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 PCNPQ8WW12 178 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
SHKBP1-202ENST00000593764 IGHV3-73A0A0B4J1V6 119 aa12.63□□□□□ -0.39
SHKBP1-202ENST00000593764 M0R036 132 aa12.63□□□□□ -0.39
SHKBP1-202ENST00000593764 ASIPP42127 132 aa12.63□□□□□ -0.39
SHKBP1-202ENST00000593764 SULT1A2P50226 295 aa12.63□□□□□ -0.39
SHKBP1-202ENST00000593764 PIK3CD-AS1Q5SR53 167 aa12.63□□□□□ -0.39
SHKBP1-202ENST00000593764 TXNDC17Q9BRA2 123 aa12.63□□□□□ -0.39
SHKBP1-202ENST00000593764 KIAA1109Q2LD37 5005 aa12.62□□□□□ -0.39
SHKBP1-202ENST00000593764 S100A9P06702 114 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-202ENST00000593764 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
SHKBP1-202ENST00000593764 EIF5AL1Q6IS14 154 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-202ENST00000593764 SLC51BQ86UW2 128 aa12.62□□□□□ -0.39
SHKBP1-202ENST00000593764 NHLRC2Q8NBF2 726 aa12.62□□□□□ -0.39
SHKBP1-202ENST00000593764 MLST8Q9BVC4 326 aa12.62□□□□□ -0.39
SHKBP1-202ENST00000593764 hCG_2014768A0A024R1R8 64 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 TRBV6-4A0A1B0GX49 114 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 GRIFINA4D1Z8 144 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 H3BVH4 76 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 ARMS2P0C7Q2 107 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 Q6ZSN1 163 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 GNG13Q9P2W3 67 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 HERC2O95714 4834 aa12.61□□□□□ -0.39
SHKBP1-202ENST00000593764 BTF3P20290 206 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-202ENST00000593764 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
SHKBP1-202ENST00000593764 AKAP14Q86UN6 197 aa12.6□□□□□ -0.39
SHKBP1-202ENST00000593764 BAGE2Q86Y30 109 aa12.6□□□□□ -0.39
SHKBP1-202ENST00000593764 PARLQ9H300 379 aa12.6□□□□□ -0.39
SHKBP1-202ENST00000593764 JPT2Q9H910 190 aa12.6□□□□□ -0.39
SHKBP1-202ENST00000593764 SCRT2Q9NQ03 307 aa12.6□□□□□ -0.39
SHKBP1-202ENST00000593764 MANBALQ9NQG1 85 aa12.6□□□□□ -0.39
SHKBP1-202ENST00000593764 A8MWV9 139 aa12.59□□□□□ -0.39
SHKBP1-202ENST00000593764 ZFP2Q6ZN57 461 aa12.59□□□□□ -0.39
SHKBP1-202ENST00000593764 SH2D6Q7Z4S9 175 aa12.59□□□□□ -0.39
SHKBP1-202ENST00000593764 SAMD10Q9BYL1 202 aa12.59□□□□□ -0.39
SHKBP1-202ENST00000593764 TMSB15BA0A087X1C1 80 aa12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 MGST1P10620 155 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 TIRAPP58753 221 aa12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 LINC00315P59091 139 aa12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 RHOHQ15669 191 aa12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 WFDC10BQ8IUB3 73 aa12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 C9orf62Q8N4C0 152 aa12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 C11orf52Q96A22 123 aa12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 PRADC1Q9BSG0 188 aa12.58□□□□□ -0.4
SHKBP1-202ENST00000593764 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-202ENST00000593764 Q6ZRN7 208 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-202ENST00000593764 DERL1Q9BUN8 251 aa12.57□□□□□ -0.4
SHKBP1-202ENST00000593764 Q9UF83 564 aa12.56□□□□□ -0.4
SHKBP1-202ENST00000593764 TNFRSF18Q9Y5U5 241 aa12.56□□□□□ -0.4
SHKBP1-202ENST00000593764 TEX46H3BTG2 121 aa12.55□□□□□ -0.4
SHKBP1-202ENST00000593764 DNAH10OSP0CZ25 163 aa12.55□□□□□ -0.4
SHKBP1-202ENST00000593764 RPL19P84098 196 aaKnown RBP12.55□□□□□ -0.4
SHKBP1-202ENST00000593764 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
SHKBP1-202ENST00000593764 PHLDA3Q9Y5J5 127 aa12.55□□□□□ -0.4
SHKBP1-202ENST00000593764 LY96Q9Y6Y9 160 aa12.55□□□□□ -0.4
SHKBP1-202ENST00000593764 SFRP2Q96HF1 295 aa12.54□□□□□ -0.4
SHKBP1-202ENST00000593764 LRP1BQ9NZR2 4599 aa12.54□□□□□ -0.4
SHKBP1-202ENST00000593764 IGLV2-8P01709 118 aa12.53□□□□□ -0.4
SHKBP1-202ENST00000593764 CRYGDP07320 174 aa12.53□□□□□ -0.4
SHKBP1-202ENST00000593764 C14orf178Q8N769 122 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-202ENST00000593764 TRAV9-2A0A087WT02 112 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 A0A1B0GVG6 124 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 K7EP13 123 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 M0R381 172 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 CXCL1P09341 107 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 LINC00694P0DN24 101 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 MED14OSP0DP75 135 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 MEF2BQ02080 365 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 PRR27Q6MZM9 219 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 ATP6V0E2Q8NHE4 81 aa12.52□□□□□ -0.41
SHKBP1-202ENST00000593764 A0A087WWL8 130 aa12.51□□□□□ -0.41
SHKBP1-202ENST00000593764 RAB19A4D1S5 217 aa12.51□□□□□ -0.41
SHKBP1-202ENST00000593764 RHODO00212 210 aa12.51□□□□□ -0.41
SHKBP1-202ENST00000593764 EVI2AP22794 236 aa12.51□□□□□ -0.41
SHKBP1-202ENST00000593764 CENPWQ5EE01 88 aa12.51□□□□□ -0.41
SHKBP1-202ENST00000593764 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
SHKBP1-202ENST00000593764 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms