RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 GYPEP15421 78 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 TAGLN2P37802 199 aaKnown RBP7□□□□□ -1.29
BRCA1-227ENST00000591849 RPL35P42766 123 aaKnown RBP7□□□□□ -1.29
BRCA1-227ENST00000591849 CRIP1P50238 77 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 ESRGQ1W209 222 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 ZNF674Q2M3X9 581 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 ZNF506Q5JVG8 444 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 NEGR1Q7Z3B1 354 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 C9orf85Q96MD7 179 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 PRADC1Q9BSG0 188 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 VAX2Q9UIW0 290 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 H3BVH4 76 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 RS1O15537 224 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 ARMS2P0C7Q2 107 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 BCL2P10415 239 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 RNASE3P12724 160 aaKnown RBP6.99□□□□□ -1.29
BRCA1-227ENST00000591849 GNG4P50150 75 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 MEF2BQ02080 365 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-227ENST00000591849 COX8CQ7Z4L0 72 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 ZNRF2Q8NHG8 242 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 PTH2Q96A98 100 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 Q9H8V8 135 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 IL36BQ9NZH7 164 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 PHLDA3Q9Y5J5 127 aa6.99□□□□□ -1.29
BRCA1-227ENST00000591849 NBDYA0A0U1RRE5 68 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 A8MWV9 139 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 LINC01559Q495D7 138 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 C1orf134Q5TEV5 83 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 CFAP126Q5VTH2 177 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 LINC00336Q6ZUF6 198 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 SH2D6Q7Z4S9 175 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 MRPS16Q9Y3D3 137 aaKnown RBP6.98□□□□□ -1.29
BRCA1-227ENST00000591849 BOLA1Q9Y3E2 137 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 KMT2AQ03164 3969 aa6.98□□□□□ -1.29
BRCA1-227ENST00000591849 RAB19A4D1S5 217 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 K7EQD1 137 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 M0R381 172 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 GATA1P15976 413 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-227ENST00000591849 RHOHQ15669 191 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 CENPWQ5EE01 88 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 TTC32Q5I0X7 151 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 DNLZQ5SXM8 178 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 C11orf52Q96A22 123 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 DERL1Q9BUN8 251 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 BIN3Q9NQY0 253 aa6.97□□□□□ -1.29
BRCA1-227ENST00000591849 MUC4Q99102 2169 aa6.96□□□□□ -1.29
BRCA1-227ENST00000591849 LOC100131303A0A0U1RQF7 123 aa6.96□□□□□ -1.3
BRCA1-227ENST00000591849 NXPH4O95158 308 aa6.96□□□□□ -1.3
BRCA1-227ENST00000591849 PIK3CD-AS1Q5SR53 167 aa6.96□□□□□ -1.3
BRCA1-227ENST00000591849 DMRTA1Q5VZB9 504 aa6.96□□□□□ -1.3
BRCA1-227ENST00000591849 LYPD5Q6UWN5 251 aa6.96□□□□□ -1.3
BRCA1-227ENST00000591849 Q6ZR54 194 aa6.96□□□□□ -1.3
BRCA1-227ENST00000591849 ZFP82Q8N141 532 aa6.96□□□□□ -1.3
BRCA1-227ENST00000591849 MLST8Q9BVC4 326 aa6.96□□□□□ -1.3
BRCA1-227ENST00000591849 TRBV6-4A0A1B0GX49 114 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 XKRY2A2RUG3 117 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 RBFOX3A6NFN3 312 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 PRSS29PA6NIE9 313 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 RHODO00212 210 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 SIVA1O15304 175 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 CEBPGP53567 150 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 RPS20P60866 119 aaKnown RBP6.95□□□□□ -1.3
BRCA1-227ENST00000591849 SSTP61278 116 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 RPL19P84098 196 aaKnown RBP6.95□□□□□ -1.3
BRCA1-227ENST00000591849 FAM74A4Q5TZK3 123 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 SPANXN1Q5VSR9 72 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 ZFP2Q6ZN57 461 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 SLC25A29Q8N8R3 303 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 OR2D3Q8NGH3 330 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 TPPP3Q9BW30 176 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 EIF5A2Q9GZV4 153 aaKnown RBP6.95□□□□□ -1.3
BRCA1-227ENST00000591849 PARLQ9H300 379 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 JPT2Q9H910 190 aa6.95□□□□□ -1.3
BRCA1-227ENST00000591849 NACAE9PAV3 2078 aa6.94□□□□□ -1.3
BRCA1-227ENST00000591849 TRAV9-2A0A087WT02 112 aa6.94□□□□□ -1.3
BRCA1-227ENST00000591849 P01737 135 aa6.94□□□□□ -1.3
BRCA1-227ENST00000591849 CXCL1P09341 107 aa6.94□□□□□ -1.3
BRCA1-227ENST00000591849 MED14OSP0DP75 135 aa6.94□□□□□ -1.3
BRCA1-227ENST00000591849 SMIM12Q96EX1 92 aa6.94□□□□□ -1.3
BRCA1-227ENST00000591849 VPS13DQ5THJ4 4388 aa6.94□□□□□ -1.3
BRCA1-227ENST00000591849 PCLOQ9Y6V0 5065 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 A0A087WWL8 130 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 TRAV8-6A0A0B4J262 113 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 A0A1W2PPQ1 181 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 GAGE12JA6NER3 117 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 SMIM17P0DL12 118 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 GAGE1Q13065 139 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 GAGE4Q13068 117 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 GAGE5Q13069 117 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 GAGE13Q4V321 117 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 TOR2AQ5JU69 321 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 ATP6V0E2Q8NHE4 81 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 KRTAP17-1Q9BYP8 105 aa6.93□□□□□ -1.3
BRCA1-227ENST00000591849 SCRT2Q9NQ03 307 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms