RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 PRR27Q6MZM9 219 aa5.4□□□□□ -1.54
SMAD4-210ENST00000590061 RASL11AQ6T310 242 aa5.4□□□□□ -1.54
SMAD4-210ENST00000590061 ZNF493Q6ZR52 646 aa5.4□□□□□ -1.54
SMAD4-210ENST00000590061 ATP5L2Q7Z4Y8 100 aa5.4□□□□□ -1.54
SMAD4-210ENST00000590061 OR2D3Q8NGH3 330 aa5.4□□□□□ -1.54
SMAD4-210ENST00000590061 NAT8BQ9UHF3 227 aa5.4□□□□□ -1.54
SMAD4-210ENST00000590061 NOTCH1P46531 2555 aa5.4□□□□□ -1.55
SMAD4-210ENST00000590061 C19orf71A6NCJ1 209 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 KNCNA6PVL3 124 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 SH2D1AO60880 128 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 IGLV2-8P01709 118 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 FOXA3P55318 350 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-210ENST00000590061 CACNG7P62955 275 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 RNF212Q495C1 297 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 DNLZQ5SXM8 178 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 KPRPQ5T749 579 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-210ENST00000590061 Q6ZWC4 215 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 FAM24BQ8N5W8 94 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 ZFAND2AQ8N6M9 145 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 Q8TAT8 98 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 ZC2HC1AQ96GY0 325 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 IL36BQ9NZH7 164 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 TP53TG3Q9ULZ0 132 aa5.39□□□□□ -1.55
SMAD4-210ENST00000590061 IGHV1OR15-1A0A075B7D0 117 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 TEX48A0A1B0GUV7 120 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 F6UB75 175 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 K7EN84 100 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 MT-ND6P03923 174 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 CD7P09564 240 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 ASIPP42127 132 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 RIGQ13278 110 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 ANXA2RQ3ZCQ2 193 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 HIST2H2BDQ6DRA6 164 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 AMTNQ6UX39 209 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 FRZBQ92765 325 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 PTH2Q96A98 100 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 SGK494Q96LW2 274 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 LINC01587Q99440 93 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 TP53TG1Q9Y2A0 90 aa5.38□□□□□ -1.55
SMAD4-210ENST00000590061 TRBV24-1A0A075B6N3 115 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 SMIM27A0A1W2PRY6 76 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 USP17L23D6RBM5 183 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 ZNF324O75467 553 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-210ENST00000590061 CA1P00915 261 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-210ENST00000590061 IGKV3-20P01619 116 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 OR5AL1P0C617 328 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 ZNF705DP0CH99 300 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-210ENST00000590061 ZNF705BP0CI00 300 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-210ENST00000590061 ZNF415Q09FC8 603 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 SPINK13Q1W4C9 94 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 GDF5OSQ5U4N7 250 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 GFI1BQ5VTD9 330 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 RNASEKQ6P5S7 137 aaKnown RBP5.37□□□□□ -1.55
SMAD4-210ENST00000590061 DEFB125Q8N687 156 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 FER1L6-AS1Q8NA97 138 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 RNASE7Q9H1E1 156 aaKnown RBP5.37□□□□□ -1.55
SMAD4-210ENST00000590061 V9GYV3 84 aa5.37□□□□□ -1.55
SMAD4-210ENST00000590061 TRAV26-1A0A087WT03 109 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 TRAV12-3A0A0B4J271 114 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 A0A1B0GUT8 65 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 M0R2Z0 102 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 TRGC1P0CF51 173 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 RRN3P1Q2M238 152 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 LBHQ53QV2 105 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-210ENST00000590061 ERASQ7Z444 233 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 ZFP82Q8N141 532 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 C16orf74Q96GX8 76 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 RCHY1Q96PM5 261 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 AURKAIP1Q9NWT8 199 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-210ENST00000590061 XCL2Q9UBD3 114 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 PHLDA3Q9Y5J5 127 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 ANK2Q01484 3957 aa5.36□□□□□ -1.55
SMAD4-210ENST00000590061 IGHV4-4A0A075B6R2 117 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 HIGD1CA8MV81 97 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 SNURFLB1AK76 121 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 PPP1R17O96001 155 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 SMIM17P0DL12 118 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 IGHV4-30-4P0DP06 118 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 MIFP14174 115 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 RPL35AP18077 110 aaKnown RBP5.35□□□□□ -1.55
SMAD4-210ENST00000590061 CRIP1P50238 77 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 FAM3BP58499 235 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-210ENST00000590061 SEC61GP60059 68 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 BTN1A1Q13410 526 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 LGALS9BQ3B8N2 356 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 SPANXN1Q5VSR9 72 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 LINC00518Q8N0U6 118 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 TMEM263Q8WUH6 116 aaKnown RBP5.35□□□□□ -1.55
SMAD4-210ENST00000590061 CNFNQ9BYD5 112 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 TNFRSF18Q9Y5U5 241 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 SELENOKQ9Y6D0 94 aa5.35□□□□□ -1.55
SMAD4-210ENST00000590061 TRRAPQ9Y4A5 3859 aa5.34□□□□□ -1.55
SMAD4-210ENST00000590061 M0R2P5 195 aa5.34□□□□□ -1.55
SMAD4-210ENST00000590061 TYMSP04818 313 aa5.34□□□□□ -1.55
SMAD4-210ENST00000590061 CTRLP40313 264 aa5.34□□□□□ -1.55
SMAD4-210ENST00000590061 ZNF80P51504 273 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-210ENST00000590061 HBBP68871 147 aa5.34□□□□□ -1.55
SMAD4-210ENST00000590061 C5orf47Q569G3 176 aa5.34□□□□□ -1.55
SMAD4-210ENST00000590061 ZNF705AQ6ZN79 300 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-210ENST00000590061 IL17DQ8TAD2 202 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms