RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ZCCHC23Q6ZST2 131 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.62□□□□□ -2.31
SMAD4-207ENST00000589076 OR5H6Q8NGV6 325 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 OR5AK2Q8NH90 309 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 BIVM-ERCC5R4GMW8 1640 aa0.62□□□□□ -2.31
SMAD4-207ENST00000589076 TRPM7Q96QT4 1865 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 A0A0J9YY99 117 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 A0A1W2PRE2 83 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 K7EIL1 84 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 TRACP01848 142 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 FABP1P07148 127 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 PRELID3AQ96N28 172 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 SMPXQ9UHP9 88 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 BOKQ9UMX3 212 aaPredicted RBP0.61□□□□□ -2.31
SMAD4-207ENST00000589076 CTTNBP2Q8WZ74 1663 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 PRKDCP78527 4128 aaKnown RBP0.61□□□□□ -2.31
SMAD4-207ENST00000589076 BCL9O00512 1426 aa0.61□□□□□ -2.31
SMAD4-207ENST00000589076 SAA1P0DJI8 122 aaPredicted RBP0.6□□□□□ -2.31
SMAD4-207ENST00000589076 MAXP61244 160 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 TFAMQ00059 246 aaKnown RBP0.6□□□□□ -2.31
SMAD4-207ENST00000589076 NEDD8Q15843 81 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 KRTAP19-6Q3LI70 58 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 OCIAD2Q56VL3 154 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 DEFB132Q7Z7B7 95 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 THEM6Q8WUY1 208 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 CLEC2BQ92478 149 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 LIMD2Q9BT23 127 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 LRP6O75581 1613 aa0.6□□□□□ -2.31
SMAD4-207ENST00000589076 NWD1Q149M9 1564 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 TRBV7-6A0A0J9YX20 115 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 TRBV30A0A0K0K1B3 111 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 TPT1P13693 172 aaKnown RBP0.59□□□□□ -2.31
SMAD4-207ENST00000589076 PDE6GP18545 87 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 SRP9P49458 86 aaKnown RBP0.59□□□□□ -2.31
SMAD4-207ENST00000589076 SPINK9Q5DT21 86 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 TOMM20LQ6UXN7 152 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 Q6ZQY7 126 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 LINC00305Q7Z4B0 112 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 GRPEL2Q8TAA5 225 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 RMND5BQ96G75 393 aaPredicted RBP0.59□□□□□ -2.31
SMAD4-207ENST00000589076 AP1S3Q96PC3 154 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 LXNQ9BS40 222 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 C10orf95Q9H7T3 257 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 MED31Q9Y3C7 131 aa0.59□□□□□ -2.31
SMAD4-207ENST00000589076 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.32
SMAD4-207ENST00000589076 DNAH1Q9P2D7 4330 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 FAM135BQ49AJ0 1406 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 ACACAQ13085 2346 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 TRBV27A0A0K0K1C4 114 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 C3orf85A0A1B0GTC6 90 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 A6NN06 94 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 ZNF727A8MUV8 499 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 POLR2HP52434 150 aaKnown RBP0.58□□□□□ -2.32
SMAD4-207ENST00000589076 FXYD4P59646 89 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 RPL37AP61513 92 aaKnown RBP0.58□□□□□ -2.32
SMAD4-207ENST00000589076 SPATA8Q6RVD6 105 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 ATOH7Q8N100 152 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 C10orf111Q8N326 155 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 CIB3Q96Q77 187 aaPredicted RBP0.58□□□□□ -2.32
SMAD4-207ENST00000589076 LPAR5Q9H1C0 372 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 KNTC1P50748 2209 aa0.58□□□□□ -2.32
SMAD4-207ENST00000589076 A2MP01023 1474 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 TRAV13-1A0A0B4J241 112 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 LOC107986453A0A1B0GWG9 222 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 NUPR2A6NF83 97 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 IFNA21P01568 189 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 HRCT1Q6UXD1 115 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 IZUMO2Q6UXV1 221 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 TEX29Q8N6K0 151 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 MORN4Q8NDC4 146 aa0.57□□□□□ -2.32
SMAD4-207ENST00000589076 PGRMC1O00264 195 aaKnown RBP0.56□□□□□ -2.32
SMAD4-207ENST00000589076 SULT1C4O75897 302 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 IGHV3-30P01768 117 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 IGHV3-30-5P0DP03 117 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 CCL4P13236 92 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 FXYD6P3P58550 94 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 SAMD13Q5VXD3 122 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 Q6ZS92 163 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 C5orf17Q8NAS9 161 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 OR9Q1Q8NGQ5 310 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 SELENOSQ9BQE4 189 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 DDA1Q9BW61 102 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 NIT2Q9NQR4 276 aa0.56□□□□□ -2.32
SMAD4-207ENST00000589076 AFDNP55196 1824 aaKnown RBP0.56□□□□□ -2.32
SMAD4-207ENST00000589076 FGD6Q6ZV73 1430 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 KCPQ6ZWJ8 1503 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 LOC107984640A0A0U1RRK4 108 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 ARL5CA6NH57 179 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 H3BMG7 143 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 CCSMST1Q4G0I0 132 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 SMIM15Q7Z3B0 74 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 Q86TA4 180 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 TCTEX1D1Q8N7M0 179 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 CCL19Q99731 98 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 TRAPPC2LQ9UL33 140 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 WDR97A6NE52 1622 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 SACSQ9NZJ4 4579 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 LOC285556D6RIA3 1793 aa0.55□□□□□ -2.32
SMAD4-207ENST00000589076 BLMP54132 1417 aaPredicted RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms