RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 OR10AG1Q8NH19 301 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 CNFNQ9BYD5 112 aa6.53□□□□□ -1.36
SMAD4-206ENST00000588860 TRAV12-3A0A0B4J271 114 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 KNCNA6PVL3 124 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 D6R8Y8 96 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 SNAI2O43623 268 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 TCF21O43680 179 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 HSBP1O75506 76 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 OR5AL1P0C617 328 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 S100A4P26447 101 aaKnown RBP6.52□□□□□ -1.37
SMAD4-206ENST00000588860 TSPOP30536 169 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 PROK1P58294 105 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 DEFB131AP59861 70 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 NSUN5P1Q3KNT7 163 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 CD300EQ496F6 205 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-206ENST00000588860 DNLZQ5SXM8 178 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 SPANXN1Q5VSR9 72 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 Q6ZWC4 215 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 NIT1Q86X76 327 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 TMEM191AQ9H0A3 160 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 U3KQK5 164 aa6.52□□□□□ -1.37
SMAD4-206ENST00000588860 MEGF8Q7Z7M0 2845 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 TRAV12-2A0A075B6T6 113 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 OR4C46A6NHA9 309 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 SMKR1H3BMG3 65 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 M0R2Z0 102 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 NCR2O95944 276 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 SCGB1D1O95968 90 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 GHRHP01286 108 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 MED14OSP0DP75 135 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 SPINK13Q1W4C9 94 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 SHISA2Q6UWI4 295 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 SMIM15Q7Z3B0 74 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 ORMDL3Q8N138 153 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 CHCHD1Q96BP2 118 aaKnown RBP6.51□□□□□ -1.37
SMAD4-206ENST00000588860 RNF185Q96GF1 192 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 URB1-AS1Q96HZ7 61 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 PRELID3AQ96N28 172 aa6.51□□□□□ -1.37
SMAD4-206ENST00000588860 IGHV4-4A0A075B6R2 117 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 TRAV25A0A0B4J276 109 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 M0R381 172 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 GNRH2O43555 120 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 SPRY2O43597 315 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 HLA-DRB4P13762 266 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 RAB4AP20338 218 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 CKS2P33552 79 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 CDKN1BP46527 198 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 FXYD7P58549 80 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 KRTDAPP60985 99 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 FAM159AQ6UWV7 190 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 FA2HQ7L5A8 372 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 SPAG8Q99932 426 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-206ENST00000588860 MAP6D1Q9H9H5 199 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 HLA-DRB4X5D2U9 266 aa6.5□□□□□ -1.37
SMAD4-206ENST00000588860 LOC389332A0A1B0GUA5 103 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 CD7P09564 240 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 LINC00614P0C842 121 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 ZNF124Q15973 351 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 PMCHL1Q16048 86 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 AMTNQ6UX39 209 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 PRSS3P2Q8NHM4 247 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 GSN-AS1Q9NRJ2 163 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 ANK2Q01484 3957 aa6.49□□□□□ -1.37
SMAD4-206ENST00000588860 IGHV1OR15-1A0A075B7D0 117 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 IGHV1-24A0A0C4DH33 117 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 RBMY1BA6NDE4 496 aaKnown RBP6.48□□□□□ -1.37
SMAD4-206ENST00000588860 RBMY1EA6NEQ0 496 aaKnown RBP6.48□□□□□ -1.37
SMAD4-206ENST00000588860 A8MTW9 85 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 H3BMM0 161 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 SAP30O75446 220 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 NPYP01303 97 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 PPBPP02775 128 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 RBMY1DP0C7P1 496 aaKnown RBP6.48□□□□□ -1.37
SMAD4-206ENST00000588860 RNASE3P12724 160 aaKnown RBP6.48□□□□□ -1.37
SMAD4-206ENST00000588860 EVI2AP22794 236 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-206ENST00000588860 KRTAP10-3P60369 221 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 S100A12P80511 92 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 SCRT2Q9NQ03 307 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 SIGLEC8Q9NYZ4 499 aa6.48□□□□□ -1.37
SMAD4-206ENST00000588860 ZNF256Q9Y2P7 627 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-206ENST00000588860 MGPP08493 103 aa6.47□□□□□ -1.37
SMAD4-206ENST00000588860 NDUFA11Q86Y39 141 aa6.47□□□□□ -1.37
SMAD4-206ENST00000588860 MAP1LC3AQ9H492 121 aa6.47□□□□□ -1.37
SMAD4-206ENST00000588860 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
SMAD4-206ENST00000588860 LAMTOR2Q9Y2Q5 125 aa6.47□□□□□ -1.37
SMAD4-206ENST00000588860 TRAV26-2A0A0B4J265 109 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 IGHV3-16A0A0C4DH30 117 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 NXPH4O95158 308 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 GAS8-AS1O95177 125 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 TNFRSF6BO95407 300 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 C3orf79P0CE67 100 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 GATA1P15976 413 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-206ENST00000588860 ODF3L2Q3SX64 289 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 TDRG1Q3Y452 100 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 OR2K2Q8NGT1 345 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 MRAP2Q96G30 205 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 AP1S3Q96PC3 154 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms