RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 IFNA1P01562 189 aa13.29□□□□□ -0.28
CIRBP-217ENST00000588230 ZNF674Q2M3X9 581 aa13.29□□□□□ -0.28
CIRBP-217ENST00000588230 PTH2Q96A98 100 aa13.29□□□□□ -0.28
CIRBP-217ENST00000588230 PKD1P98161 4303 aa13.28□□□□□ -0.28
CIRBP-217ENST00000588230 PGPEP1LA6NFU8 196 aa13.28□□□□□ -0.28
CIRBP-217ENST00000588230 RTL8CO15255 209 aa13.28□□□□□ -0.28
CIRBP-217ENST00000588230 ZNF506Q5JVG8 444 aa13.28□□□□□ -0.28
CIRBP-217ENST00000588230 PCNPQ8WW12 178 aaKnown RBP13.28□□□□□ -0.28
CIRBP-217ENST00000588230 HERC2O95714 4834 aa13.27□□□□□ -0.29
CIRBP-217ENST00000588230 GRIFINA4D1Z8 144 aa13.27□□□□□ -0.29
CIRBP-217ENST00000588230 RS1O15537 224 aa13.27□□□□□ -0.29
CIRBP-217ENST00000588230 C11orf52Q96A22 123 aa13.27□□□□□ -0.29
CIRBP-217ENST00000588230 Q9H8V8 135 aa13.27□□□□□ -0.29
CIRBP-217ENST00000588230 IL36BQ9NZH7 164 aa13.27□□□□□ -0.29
CIRBP-217ENST00000588230 MRPS16Q9Y3D3 137 aaKnown RBP13.27□□□□□ -0.29
CIRBP-217ENST00000588230 TMSB15BA0A087X1C1 80 aa13.26□□□□□ -0.29
CIRBP-217ENST00000588230 NBDYA0A0U1RRE5 68 aa13.26□□□□□ -0.29
CIRBP-217ENST00000588230 A0A1B0GVY2 172 aa13.26□□□□□ -0.29
CIRBP-217ENST00000588230 H3BVH4 76 aa13.26□□□□□ -0.29
CIRBP-217ENST00000588230 CIDEAO60543 219 aa13.26□□□□□ -0.29
CIRBP-217ENST00000588230 GYPEP15421 78 aa13.26□□□□□ -0.29
CIRBP-217ENST00000588230 RPL35P42766 123 aaKnown RBP13.26□□□□□ -0.29
CIRBP-217ENST00000588230 NKX2-5P52952 324 aaPredicted RBP13.26□□□□□ -0.29
CIRBP-217ENST00000588230 CFAP126Q5VTH2 177 aa13.26□□□□□ -0.29
CIRBP-217ENST00000588230 ALKAL2Q6UX46 152 aa13.26□□□□□ -0.29
CIRBP-217ENST00000588230 ARMS2P0C7Q2 107 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 BCL2P10415 239 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 SRIP30626 198 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 MEF2BQ02080 365 aaPredicted RBP13.25□□□□□ -0.29
CIRBP-217ENST00000588230 LINC01559Q495D7 138 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 SOHLH1Q5JUK2 328 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 DNLZQ5SXM8 178 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 LINC00336Q6ZUF6 198 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 NEGR1Q7Z3B1 354 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 UPK3BQ9BT76 320 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
CIRBP-217ENST00000588230 IGHV3-73A0A0B4J1V6 119 aa13.24□□□□□ -0.29
CIRBP-217ENST00000588230 K7EQD1 137 aa13.24□□□□□ -0.29
CIRBP-217ENST00000588230 PDE6DO43924 150 aa13.24□□□□□ -0.29
CIRBP-217ENST00000588230 GATA1P15976 413 aaPredicted RBP13.24□□□□□ -0.29
CIRBP-217ENST00000588230 PIK3CD-AS1Q5SR53 167 aa13.24□□□□□ -0.29
CIRBP-217ENST00000588230 C1orf134Q5TEV5 83 aa13.24□□□□□ -0.29
CIRBP-217ENST00000588230 DERL1Q9BUN8 251 aa13.24□□□□□ -0.29
CIRBP-217ENST00000588230 DNAH11Q96DT5 4516 aa13.24□□□□□ -0.29
CIRBP-217ENST00000588230 DYNC1H1Q14204 4646 aaKnown RBP13.23□□□□□ -0.29
CIRBP-217ENST00000588230 A8MWV9 139 aa13.23□□□□□ -0.29
CIRBP-217ENST00000588230 TAGLN2P37802 199 aaKnown RBP13.23□□□□□ -0.29
CIRBP-217ENST00000588230 BLOC1S1P78537 153 aa13.23□□□□□ -0.29
CIRBP-217ENST00000588230 PRR27Q6MZM9 219 aa13.23□□□□□ -0.29
CIRBP-217ENST00000588230 SYT8Q8NBV8 401 aa13.23□□□□□ -0.29
CIRBP-217ENST00000588230 MED9Q9NWA0 146 aa13.23□□□□□ -0.29
CIRBP-217ENST00000588230 VAX2Q9UIW0 290 aa13.23□□□□□ -0.29
CIRBP-217ENST00000588230 PHLDA3Q9Y5J5 127 aa13.23□□□□□ -0.29
CIRBP-217ENST00000588230 LYPD5Q6UWN5 251 aa13.22□□□□□ -0.29
CIRBP-217ENST00000588230 BOLA1Q9Y3E2 137 aa13.22□□□□□ -0.29
CIRBP-217ENST00000588230 KIAA1109Q2LD37 5005 aa13.21□□□□□ -0.29
CIRBP-217ENST00000588230 CENPWQ5EE01 88 aa13.21□□□□□ -0.29
CIRBP-217ENST00000588230 TTC32Q5I0X7 151 aa13.21□□□□□ -0.29
CIRBP-217ENST00000588230 DMRTA1Q5VZB9 504 aa13.21□□□□□ -0.29
CIRBP-217ENST00000588230 SLC25A29Q8N8R3 303 aa13.21□□□□□ -0.29
CIRBP-217ENST00000588230 PRADC1Q9BSG0 188 aa13.21□□□□□ -0.29
CIRBP-217ENST00000588230 LOC100131303A0A0U1RQF7 123 aa13.2□□□□□ -0.3
CIRBP-217ENST00000588230 RAB19A4D1S5 217 aa13.2□□□□□ -0.3
CIRBP-217ENST00000588230 SH2D6Q7Z4S9 175 aa13.2□□□□□ -0.3
CIRBP-217ENST00000588230 ZNF575Q86XF7 245 aa13.2□□□□□ -0.3
CIRBP-217ENST00000588230 PARLQ9H300 379 aa13.2□□□□□ -0.3
CIRBP-217ENST00000588230 TRBV6-4A0A1B0GX49 114 aa13.19□□□□□ -0.3
CIRBP-217ENST00000588230 PRSS29PA6NIE9 313 aa13.19□□□□□ -0.3
CIRBP-217ENST00000588230 NXPH4O95158 308 aa13.19□□□□□ -0.3
CIRBP-217ENST00000588230 MGST1P10620 155 aaKnown RBP13.19□□□□□ -0.3
CIRBP-217ENST00000588230 GNG4P50150 75 aa13.19□□□□□ -0.3
CIRBP-217ENST00000588230 RPL19P84098 196 aaKnown RBP13.19□□□□□ -0.3
CIRBP-217ENST00000588230 RHOHQ15669 191 aa13.19□□□□□ -0.3
CIRBP-217ENST00000588230 ZFP2Q6ZN57 461 aa13.19□□□□□ -0.3
CIRBP-217ENST00000588230 JPT2Q9H910 190 aa13.19□□□□□ -0.3
CIRBP-217ENST00000588230 SCRT2Q9NQ03 307 aa13.19□□□□□ -0.3
CIRBP-217ENST00000588230 M0R381 172 aa13.18□□□□□ -0.3
CIRBP-217ENST00000588230 SIVA1O15304 175 aa13.18□□□□□ -0.3
CIRBP-217ENST00000588230 ZFP82Q8N141 532 aa13.18□□□□□ -0.3
CIRBP-217ENST00000588230 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
CIRBP-217ENST00000588230 CXCL1P09341 107 aa13.17□□□□□ -0.3
CIRBP-217ENST00000588230 MED14OSP0DP75 135 aa13.17□□□□□ -0.3
CIRBP-217ENST00000588230 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
CIRBP-217ENST00000588230 SMIM12Q96EX1 92 aa13.17□□□□□ -0.3
CIRBP-217ENST00000588230 SAMD10Q9BYL1 202 aa13.17□□□□□ -0.3
CIRBP-217ENST00000588230 A0A1W2PPQ1 181 aa13.16□□□□□ -0.3
CIRBP-217ENST00000588230 RHODO00212 210 aa13.16□□□□□ -0.3
CIRBP-217ENST00000588230 IGLV2-8P01709 118 aa13.16□□□□□ -0.3
CIRBP-217ENST00000588230 RBFOX3A6NFN3 312 aa13.15□□□□□ -0.3
CIRBP-217ENST00000588230 FAM74A4Q5TZK3 123 aa13.15□□□□□ -0.3
CIRBP-217ENST00000588230 Q6ZSN1 163 aa13.15□□□□□ -0.3
CIRBP-217ENST00000588230 LYPD6BQ8NI32 183 aa13.15□□□□□ -0.3
CIRBP-217ENST00000588230 SFRP2Q96HF1 295 aa13.15□□□□□ -0.3
CIRBP-217ENST00000588230 KRTAP1-5Q9BYS1 174 aa13.15□□□□□ -0.3
CIRBP-217ENST00000588230 UFSP1Q6NVU6 142 aa13.14□□□□□ -0.31
CIRBP-217ENST00000588230 BIN3Q9NQY0 253 aa13.14□□□□□ -0.31
CIRBP-217ENST00000588230 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
CIRBP-217ENST00000588230 A0A087WWL8 130 aa13.13□□□□□ -0.31
CIRBP-217ENST00000588230 OR2D3Q8NGH3 330 aa13.13□□□□□ -0.31
CIRBP-217ENST00000588230 OR10AG1Q8NH19 301 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms