RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 AZU1P20160 251 aa7.75□□□□□ -1.17
SS18-213ENST00000579640 CACNG7P62955 275 aa7.75□□□□□ -1.17
SS18-213ENST00000579640 LYZL1Q6UWQ5 148 aa7.75□□□□□ -1.17
SS18-213ENST00000579640 PGLYRP4Q96LB8 373 aa7.75□□□□□ -1.17
SS18-213ENST00000579640 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
SS18-213ENST00000579640 TPPP3Q9BW30 176 aa7.75□□□□□ -1.17
SS18-213ENST00000579640 CNFNQ9BYD5 112 aa7.75□□□□□ -1.17
SS18-213ENST00000579640 PHLDA3Q9Y5J5 127 aa7.75□□□□□ -1.17
SS18-213ENST00000579640 PRM2P04554 102 aa7.74□□□□□ -1.17
SS18-213ENST00000579640 FAM3BP58499 235 aaPredicted RBP7.74□□□□□ -1.17
SS18-213ENST00000579640 DEFA6Q01524 100 aa7.74□□□□□ -1.17
SS18-213ENST00000579640 IL17DQ8TAD2 202 aa7.74□□□□□ -1.17
SS18-213ENST00000579640 PTH2Q96A98 100 aa7.74□□□□□ -1.17
SS18-213ENST00000579640 B9D2Q9BPU9 175 aa7.74□□□□□ -1.17
SS18-213ENST00000579640 GSN-AS1Q9NRJ2 163 aa7.74□□□□□ -1.17
SS18-213ENST00000579640 IGHV4-4A0A075B6R2 117 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 A0A1B0GUT8 65 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 DAZ2Q13117 558 aaKnown RBP7.73□□□□□ -1.17
SS18-213ENST00000579640 RIGQ13278 110 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 PIK3CD-AS1Q5SR53 167 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 ATP5L2Q7Z4Y8 100 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 ZFP82Q8N141 532 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 SYT8Q8NBV8 401 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 TIMM8BQ9Y5J9 83 aaPredicted RBP7.73□□□□□ -1.17
SS18-213ENST00000579640 URGCP-MRPS24S4R325 110 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 A0A1B0GW15 77 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 M0R2P5 195 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 SPANXN1Q5VSR9 72 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 TMEM88Q6PEY1 159 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 CBLN2Q8IUK8 224 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 NDUFAF3Q9BU61 184 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 ZMAT4Q9H898 229 aa7.73□□□□□ -1.17
SS18-213ENST00000579640 IGHV4-28A0A0C4DH34 117 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 PLAC8L1A1L4L8 177 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 SCO1O75880 301 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 NXPH4O95158 308 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 S100A8P05109 93 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 ELOBQ15370 118 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 LGALS9BQ3B8N2 356 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 Q8NAQ8 132 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 OR10AG1Q8NH19 301 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 RETNQ9HD89 108 aa7.72□□□□□ -1.17
SS18-213ENST00000579640 TRBV24-1A0A075B6N3 115 aa7.71□□□□□ -1.17
SS18-213ENST00000579640 SPINK4O60575 86 aa7.71□□□□□ -1.17
SS18-213ENST00000579640 RASL11AQ6T310 242 aa7.71□□□□□ -1.17
SS18-213ENST00000579640 LYRM9A8MSI8 78 aa7.71□□□□□ -1.18
SS18-213ENST00000579640 M0R381 172 aa7.71□□□□□ -1.18
SS18-213ENST00000579640 NHLRC4P0CG21 123 aaPredicted RBP7.71□□□□□ -1.18
SS18-213ENST00000579640 NTF3P20783 257 aa7.71□□□□□ -1.18
SS18-213ENST00000579640 HBBP68871 147 aa7.71□□□□□ -1.18
SS18-213ENST00000579640 TWIST1Q15672 202 aa7.71□□□□□ -1.18
SS18-213ENST00000579640 COX19Q49B96 90 aa7.71□□□□□ -1.18
SS18-213ENST00000579640 RASL10AQ92737 203 aa7.71□□□□□ -1.18
SS18-213ENST00000579640 YPEL4Q96NS1 127 aa7.71□□□□□ -1.18
SS18-213ENST00000579640 C11orf68Q9H3H3 251 aaKnown RBP7.71□□□□□ -1.18
SS18-213ENST00000579640 NOP10Q9NPE3 64 aaKnown RBP7.71□□□□□ -1.18
SS18-213ENST00000579640 MUC21A0A0G2JKD1 596 aa7.7□□□□□ -1.18
SS18-213ENST00000579640 MUC21A0A140T8X8 626 aa7.7□□□□□ -1.18
SS18-213ENST00000579640 TEX48A0A1B0GUV7 120 aa7.7□□□□□ -1.18
SS18-213ENST00000579640 A0A1B0GXF2 115 aa7.7□□□□□ -1.18
SS18-213ENST00000579640 TRGC1P0CF51 173 aa7.7□□□□□ -1.18
SS18-213ENST00000579640 ZNF876PQ49A33 203 aa7.7□□□□□ -1.18
SS18-213ENST00000579640 DMRTA1Q5VZB9 504 aa7.7□□□□□ -1.18
SS18-213ENST00000579640 MRPL54Q6P161 138 aaKnown RBP7.7□□□□□ -1.18
SS18-213ENST00000579640 TRGV1A0A0A0MS02 117 aa7.69□□□□□ -1.18
SS18-213ENST00000579640 TGIF2-C20orf24A0A0A6YYL0 155 aa7.69□□□□□ -1.18
SS18-213ENST00000579640 EMP1P54849 157 aa7.69□□□□□ -1.18
SS18-213ENST00000579640 SMIM15Q7Z3B0 74 aa7.69□□□□□ -1.18
SS18-213ENST00000579640 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
SS18-213ENST00000579640 MUC4Q99102 2169 aa7.69□□□□□ -1.18
SS18-213ENST00000579640 A8MWV9 139 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 GATD1Q8NB37 220 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 FAM210BQ96KR6 192 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 MRPL16Q9NX20 251 aaKnown RBP7.68□□□□□ -1.18
SS18-213ENST00000579640 SPART-AS1P0CW21 52 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 CAMPP49913 170 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 SSTP61278 116 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 LINC00612Q8N6U2 182 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 TMEM191AQ9H0A3 160 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 MSRB1Q9NZV6 116 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 DKK2Q9UBU2 259 aa7.68□□□□□ -1.18
SS18-213ENST00000579640 COLCA2A8K830 154 aa7.67□□□□□ -1.18
SS18-213ENST00000579640 SMIM17P0DL12 118 aa7.67□□□□□ -1.18
SS18-213ENST00000579640 FAM222AQ5U5X8 452 aa7.67□□□□□ -1.18
SS18-213ENST00000579640 Q6ZTI0 123 aa7.67□□□□□ -1.18
SS18-213ENST00000579640 C18orf15Q96N68 181 aa7.67□□□□□ -1.18
SS18-213ENST00000579640 GNB1LQ9BYB4 327 aa7.67□□□□□ -1.18
SS18-213ENST00000579640 DEFB4AO15263 64 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 RS1O15537 224 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 CIDEAO60543 219 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 MT-ND6P03923 174 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 DPH3P1Q9H4G8 78 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 NBEAL2Q6ZNJ1 2754 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 TRGV2A0A075B6R0 118 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 TRAV4A0A0B4J268 109 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 GAGE12BA1L429 117 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 RHODO00212 210 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 GAGE7O76087 117 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 HLA-DQA1P01909 254 aa7.66□□□□□ -1.18
SS18-213ENST00000579640 GAGE12FP0CL80 117 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms