RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 HLA-DRB4X5D2U9 266 aa3.36□□□□□ -1.87
GAPLINC-202ENST00000579007 IGKV1D-37A0A075B6S9 117 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 DEFB131BA0A096LNP1 70 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 ZNF705FA8MVS1 300 aaPredicted RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 H3BMM0 161 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 PFDN1O60925 122 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 SERF1AO75920 110 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 IL4P05112 153 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 PFN1P07737 140 aaKnown RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 OR10J4P0C629 311 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 ZNF705DP0CH99 300 aaPredicted RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 ZNF705BP0CI00 300 aaPredicted RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 NPPCP23582 126 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 OR10J1P30954 320 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 SNCAP37840 140 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 CMC4P56277 68 aaPredicted RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 FXYD7P58549 80 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 RPL23P62829 140 aaKnown RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 DHRS2Q13268 280 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 ORMDL2Q53FV1 153 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 C2orf83Q53S99 150 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 NMSQ5H8A3 153 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 FAM222AQ5U5X8 452 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 Q6ZR54 194 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 CLVS1Q8IUQ0 354 aaPredicted RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 OR4C16Q8NGL9 310 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 ZNRF2Q8NHG8 242 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 RNASE11Q8TAA1 199 aaKnown RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 GPR146Q96CH1 333 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 SLC35E1Q96K37 410 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 EIF5A2Q9GZV4 153 aaKnown RBP3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 TMEM222Q9H0R3 208 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 NAA60Q9H7X0 242 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 GSKIPQ9P0R6 139 aa3.35□□□□□ -1.87
GAPLINC-202ENST00000579007 IGLV2-18A0A075B6J9 118 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 A0A087WXM4 84 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 CRYM-AS1A6NIL9 109 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 TMEM250H0YL14 139 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 M0R2N4 97 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 PAX4O43316 350 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 CDS2O95674 445 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 NPY1RP25929 384 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 YPEL3P61236 119 aaPredicted RBP3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 ZFP69Q49AA0 526 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 SCGB2B2Q4G0G5 96 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 TMEM128Q5BJH2 165 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 Q6ZRU5 148 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 POM121L12Q8N7R1 296 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 TMEM229BQ8NBD8 167 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 RBPMSQ93062 196 aaKnown RBP3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 LINC00477Q96M19 166 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 PDCD10Q9BUL8 212 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 SLC35B3Q9H1N7 401 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 COPZ2Q9P299 210 aa3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 RSL24D1Q9UHA3 163 aaKnown RBP3.34□□□□□ -1.87
GAPLINC-202ENST00000579007 IGKV1OR2-108A0A075B7D4 117 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 CEBPZOSA8MTT3 80 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 A8MTW9 85 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 FAM25AB3EWG3 89 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 FAM25CB3EWG5 89 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 FAM25GB3EWG6 89 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 GABARAPH6UMI1 98 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 SLC17A3O00476 420 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 IGKV3-20P01619 116 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 SLC25A4P12235 298 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 SUPT4H1P63272 117 aaKnown RBP3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 ZNF90Q03938 601 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 ERCC8Q13216 396 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 ZNF79Q15937 498 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 LGALS9BQ3B8N2 356 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 XP32Q5T750 250 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 AMTNQ6UX39 209 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 EIF4E3Q8N5X7 224 aaKnown RBP3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 TERB2Q8NHR7 220 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 ORAOV1Q8WV07 137 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 SMIM4Q8WVI0 70 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 RPUSD4Q96CM3 377 aaKnown RBP3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 LINC01587Q99440 93 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 SH3BGRL3Q9H299 93 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 TMPRSS5Q9H3S3 457 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 PKIGQ9Y2B9 76 aa3.33□□□□□ -1.88
GAPLINC-202ENST00000579007 TRAV30A0A087WSZ9 112 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 SMIM31A0A1B0GVY4 71 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 MAP1LC3B2A6NCE7 125 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 EPM2AB3EWF7 344 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 GSTZ1O43708 216 aaPredicted RBP3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 C1QBP02746 253 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 PRM2P04554 102 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 P0DMU3 169 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 FAM231AP0DMU4 169 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 FAM231CP0DMU5 169 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 PSMB3P49720 205 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 EIF2B2P49770 351 aaKnown RBP3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 EMP1P54849 157 aa3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 SNRPD3P62318 126 aaKnown RBP3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 JOSD1Q15040 202 aaPredicted RBP3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 SURF2Q15527 256 aaPredicted RBP3.32□□□□□ -1.88
GAPLINC-202ENST00000579007 AKR1C8PQ5T2L2 129 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms