RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 TRAV26-1A0A087WT03 109 aa16.6■□□□□ 0.25
ERBB2-209ENST00000578709 C19orf71A6NCJ1 209 aa16.6■□□□□ 0.25
ERBB2-209ENST00000578709 H3BNG1 76 aa16.6■□□□□ 0.25
ERBB2-209ENST00000578709 H3BVH4 76 aa16.6■□□□□ 0.25
ERBB2-209ENST00000578709 SRP19P09132 144 aaKnown RBP16.6■□□□□ 0.25
ERBB2-209ENST00000578709 PIK3CD-AS1Q5SR53 167 aa16.6■□□□□ 0.25
ERBB2-209ENST00000578709 SCRT2Q9NQ03 307 aa16.6■□□□□ 0.25
ERBB2-209ENST00000578709 LY6G6CO95867 125 aa16.59■□□□□ 0.25
ERBB2-209ENST00000578709 ARMS2P0C7Q2 107 aa16.59■□□□□ 0.25
ERBB2-209ENST00000578709 RPL19P84098 196 aaKnown RBP16.59■□□□□ 0.25
ERBB2-209ENST00000578709 FHL2Q14192 279 aa16.59■□□□□ 0.25
ERBB2-209ENST00000578709 ZNF479Q96JC4 524 aa16.59■□□□□ 0.25
ERBB2-209ENST00000578709 VPS13DQ5THJ4 4388 aa16.58■□□□□ 0.25
ERBB2-209ENST00000578709 SFTA3P0C7M3 94 aa16.58■□□□□ 0.24
ERBB2-209ENST00000578709 MED14OSP0DP75 135 aa16.58■□□□□ 0.24
ERBB2-209ENST00000578709 OR4C5Q8NGB2 326 aa16.58■□□□□ 0.24
ERBB2-209ENST00000578709 OCC1Q8TAD7 63 aa16.58■□□□□ 0.24
ERBB2-209ENST00000578709 SLAQ13239 276 aa16.57■□□□□ 0.24
ERBB2-209ENST00000578709 DAZAP1Q96EP5 407 aaKnown RBP16.57■□□□□ 0.24
ERBB2-209ENST00000578709 VSIG2Q96IQ7 327 aa16.57■□□□□ 0.24
ERBB2-209ENST00000578709 RYR3Q15413 4870 aa16.57■□□□□ 0.24
ERBB2-209ENST00000578709 A0A0J9YY99 117 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 K7EN84 100 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 RS1O15537 224 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 P0DMU3 169 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 FAM231AP0DMU4 169 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 FAM231CP0DMU5 169 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 CEBPGP53567 150 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 SMDT1Q9H4I9 107 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 PRO0255Q9UI72 69 aa16.56■□□□□ 0.24
ERBB2-209ENST00000578709 RAB14P61106 215 aa16.55■□□□□ 0.24
ERBB2-209ENST00000578709 CFAP126Q5VTH2 177 aa16.55■□□□□ 0.24
ERBB2-209ENST00000578709 SMIM7Q9BQ49 75 aa16.55■□□□□ 0.24
ERBB2-209ENST00000578709 HHLA3Q9XRX5 114 aa16.55■□□□□ 0.24
ERBB2-209ENST00000578709 LY96Q9Y6Y9 160 aa16.55■□□□□ 0.24
ERBB2-209ENST00000578709 TRGV4A0A0C4DH28 118 aa16.54■□□□□ 0.24
ERBB2-209ENST00000578709 CIDEAO60543 219 aa16.54■□□□□ 0.24
ERBB2-209ENST00000578709 NUDT3O95989 172 aa16.54■□□□□ 0.24
ERBB2-209ENST00000578709 P01737 135 aa16.54■□□□□ 0.24
ERBB2-209ENST00000578709 CRYBA4P53673 196 aa16.54■□□□□ 0.24
ERBB2-209ENST00000578709 IFITM2Q01629 132 aa16.54■□□□□ 0.24
ERBB2-209ENST00000578709 PEA15Q15121 130 aa16.54■□□□□ 0.24
ERBB2-209ENST00000578709 SSBP4Q9BWG4 385 aaPredicted RBP16.54■□□□□ 0.24
ERBB2-209ENST00000578709 PHLDA3Q9Y5J5 127 aa16.54■□□□□ 0.24
ERBB2-209ENST00000578709 C9JQL5 133 aa16.53■□□□□ 0.24
ERBB2-209ENST00000578709 PAX4O43316 350 aa16.53■□□□□ 0.24
ERBB2-209ENST00000578709 RPS20P60866 119 aaKnown RBP16.53■□□□□ 0.24
ERBB2-209ENST00000578709 SRSF3P84103 164 aaKnown RBP16.53■□□□□ 0.24
ERBB2-209ENST00000578709 DMRTA1Q5VZB9 504 aa16.53■□□□□ 0.24
ERBB2-209ENST00000578709 SYT8Q8NBV8 401 aa16.53■□□□□ 0.24
ERBB2-209ENST00000578709 OR2D3Q8NGH3 330 aa16.53■□□□□ 0.24
ERBB2-209ENST00000578709 A8MWV9 139 aa16.52■□□□□ 0.24
ERBB2-209ENST00000578709 SNAI2O43623 268 aa16.52■□□□□ 0.24
ERBB2-209ENST00000578709 OR5AL1P0C617 328 aa16.52■□□□□ 0.24
ERBB2-209ENST00000578709 HYDINQ4G0P3 5121 aa16.51■□□□□ 0.23
ERBB2-209ENST00000578709 ZNF727A8MUV8 499 aa16.51■□□□□ 0.23
ERBB2-209ENST00000578709 NXPH4O95158 308 aa16.51■□□□□ 0.23
ERBB2-209ENST00000578709 ZFP82Q8N141 532 aa16.51■□□□□ 0.23
ERBB2-209ENST00000578709 NUDT10Q8NFP7 164 aa16.51■□□□□ 0.23
ERBB2-209ENST00000578709 NUDT11Q96G61 164 aa16.51■□□□□ 0.23
ERBB2-209ENST00000578709 GATA1P15976 413 aaPredicted RBP16.5■□□□□ 0.23
ERBB2-209ENST00000578709 RNF212Q495C1 297 aa16.5■□□□□ 0.23
ERBB2-209ENST00000578709 FAM74A3Q4VXF1 159 aa16.5■□□□□ 0.23
ERBB2-209ENST00000578709 CLLU1Q5K131 121 aa16.5■□□□□ 0.23
ERBB2-209ENST00000578709 XKRY2A2RUG3 117 aa16.49■□□□□ 0.23
ERBB2-209ENST00000578709 IGLC6P0CF74 106 aa16.49■□□□□ 0.23
ERBB2-209ENST00000578709 ZFP2Q6ZN57 461 aa16.49■□□□□ 0.23
ERBB2-209ENST00000578709 LINC01551Q86U37 167 aa16.49■□□□□ 0.23
ERBB2-209ENST00000578709 OR10AG1Q8NH19 301 aa16.49■□□□□ 0.23
ERBB2-209ENST00000578709 RNASE7Q9H1E1 156 aaKnown RBP16.49■□□□□ 0.23
ERBB2-209ENST00000578709 A0A096LPF7 62 aa16.48■□□□□ 0.23
ERBB2-209ENST00000578709 M0R381 172 aa16.48■□□□□ 0.23
ERBB2-209ENST00000578709 GZMBP10144 247 aa16.48■□□□□ 0.23
ERBB2-209ENST00000578709 UFSP1Q6NVU6 142 aa16.48■□□□□ 0.23
ERBB2-209ENST00000578709 FAM231DQ6ZW35 169 aa16.48■□□□□ 0.23
ERBB2-209ENST00000578709 SFRP2Q96HF1 295 aa16.48■□□□□ 0.23
ERBB2-209ENST00000578709 RPP21Q9H633 154 aaKnown RBP16.48■□□□□ 0.23
ERBB2-209ENST00000578709 JPT2Q9H910 190 aa16.48■□□□□ 0.23
ERBB2-209ENST00000578709 DNAH6Q9C0G6 4158 aa16.48■□□□□ 0.23
ERBB2-209ENST00000578709 KMT2AQ03164 3969 aa16.47■□□□□ 0.23
ERBB2-209ENST00000578709 ICOSQ9Y6W8 199 aa16.47■□□□□ 0.23
ERBB2-209ENST00000578709 UBE2DNLQ8IWF7 75 aa16.46■□□□□ 0.23
ERBB2-209ENST00000578709 FER1L6-AS1Q8NA97 138 aa16.46■□□□□ 0.23
ERBB2-209ENST00000578709 SAMD10Q9BYL1 202 aa16.46■□□□□ 0.23
ERBB2-209ENST00000578709 IGHV3-73A0A0B4J1V6 119 aa16.45■□□□□ 0.22
ERBB2-209ENST00000578709 RHODO00212 210 aa16.45■□□□□ 0.22
ERBB2-209ENST00000578709 FAM3BP58499 235 aaPredicted RBP16.45■□□□□ 0.22
ERBB2-209ENST00000578709 TMEM241Q24JQ0 296 aa16.45■□□□□ 0.22
ERBB2-209ENST00000578709 TRBV6-4A0A1B0GX49 114 aa16.44■□□□□ 0.22
ERBB2-209ENST00000578709 CCL18P55774 89 aa16.44■□□□□ 0.22
ERBB2-209ENST00000578709 MRPL23Q16540 153 aaKnown RBP16.44■□□□□ 0.22
ERBB2-209ENST00000578709 SLC25A29Q8N8R3 303 aa16.44■□□□□ 0.22
ERBB2-209ENST00000578709 A0A1W2PPQ1 181 aa16.43■□□□□ 0.22
ERBB2-209ENST00000578709 K7EQD1 137 aa16.43■□□□□ 0.22
ERBB2-209ENST00000578709 CRYGDP07320 174 aa16.43■□□□□ 0.22
ERBB2-209ENST00000578709 GYPEP15421 78 aa16.43■□□□□ 0.22
ERBB2-209ENST00000578709 SPANXN1Q5VSR9 72 aa16.43■□□□□ 0.22
ERBB2-209ENST00000578709 MUC21A0A0G2JKD1 596 aa16.42■□□□□ 0.22
ERBB2-209ENST00000578709 MUC21A0A140T8X8 626 aa16.42■□□□□ 0.22
ERBB2-209ENST00000578709 F2Z2F3 143 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms